RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 DUSP27Q5VZP5 1158 aa16.88■□□□□ 0.29
LRRK1-207ENST00000531270 GPATCH11Q8N954 259 aa16.88■□□□□ 0.29
LRRK1-207ENST00000531270 BMS1Q14692 1282 aaKnown RBP16.87■□□□□ 0.29
LRRK1-207ENST00000531270 AKNAQ7Z591 1439 aa16.87■□□□□ 0.29
LRRK1-207ENST00000531270 ANKLE2Q86XL3 938 aa16.87■□□□□ 0.29
LRRK1-207ENST00000531270 SMARCC1Q92922 1105 aaPredicted RBP16.87■□□□□ 0.29
LRRK1-207ENST00000531270 NAA15Q9BXJ9 866 aaKnown RBP16.87■□□□□ 0.29
LRRK1-207ENST00000531270 A0A1W2PRG0 241 aa16.87■□□□□ 0.29
LRRK1-207ENST00000531270 CCDC183Q5T5S1 534 aa16.87■□□□□ 0.29
LRRK1-207ENST00000531270 WDR63Q8IWG1 891 aa16.87■□□□□ 0.29
LRRK1-207ENST00000531270 FSIP1Q8NA03 581 aa16.87■□□□□ 0.29
LRRK1-207ENST00000531270 ZSWIM4Q9H7M6 989 aa16.87■□□□□ 0.29
LRRK1-207ENST00000531270 JADE2Q9NQC1 790 aa16.87■□□□□ 0.29
LRRK1-207ENST00000531270 MXRA7P84157 204 aa16.86■□□□□ 0.29
LRRK1-207ENST00000531270 ZNF622Q969S3 477 aaKnown RBP eCLIP16.86■□□□□ 0.29
LRRK1-207ENST00000531270 C16orf45Q96MC5 204 aaPredicted RBP16.86■□□□□ 0.29
LRRK1-207ENST00000531270 GLRX3O76003 335 aaKnown RBP16.86■□□□□ 0.29
LRRK1-207ENST00000531270 GTF2F1P35269 517 aaKnown RBP eCLIP16.86■□□□□ 0.29
LRRK1-207ENST00000531270 C6orf163Q5TEZ5 329 aa16.86■□□□□ 0.29
LRRK1-207ENST00000531270 ARHGAP5Q13017 1502 aa16.86■□□□□ 0.29
LRRK1-207ENST00000531270 KIF2AO00139 706 aaPredicted RBP16.86■□□□□ 0.29
LRRK1-207ENST00000531270 TCP11L1Q9NUJ3 509 aa16.86■□□□□ 0.29
LRRK1-207ENST00000531270 GJC1P36383 396 aa16.86■□□□□ 0.29
LRRK1-207ENST00000531270 CCDC174Q6PII3 467 aa16.86■□□□□ 0.29
LRRK1-207ENST00000531270 DPH6Q7L8W6 267 aa16.86■□□□□ 0.29
LRRK1-207ENST00000531270 SLF2Q8IX21 1173 aa16.86■□□□□ 0.29
LRRK1-207ENST00000531270 RPAP2Q8IXW5 612 aaPredicted RBP16.86■□□□□ 0.29
LRRK1-207ENST00000531270 ANKRD50Q9ULJ7 1429 aa16.85■□□□□ 0.29
LRRK1-207ENST00000531270 RAB11FIP3O75154 756 aa16.85■□□□□ 0.29
LRRK1-207ENST00000531270 CABP5Q9NP86 173 aa16.85■□□□□ 0.29
LRRK1-207ENST00000531270 FBF1Q8TES7 1133 aa16.85■□□□□ 0.29
LRRK1-207ENST00000531270 CADPSQ9ULU8 1353 aa16.84■□□□□ 0.29
LRRK1-207ENST00000531270 KAT14Q9H8E8 782 aa16.84■□□□□ 0.29
LRRK1-207ENST00000531270 TSPY2A6NKD2 308 aa16.84■□□□□ 0.29
LRRK1-207ENST00000531270 AMPD3Q01432 767 aa16.84■□□□□ 0.29
LRRK1-207ENST00000531270 ANKRD30BQ9BXX2 1392 aa16.84■□□□□ 0.29
LRRK1-207ENST00000531270 SPECC1LQ69YQ0 1117 aa16.84■□□□□ 0.29
LRRK1-207ENST00000531270 RNF41Q9H4P4 317 aaPredicted RBP16.84■□□□□ 0.29
LRRK1-207ENST00000531270 NDC80O14777 642 aa16.84■□□□□ 0.29
LRRK1-207ENST00000531270 HAND2P61296 217 aa16.83■□□□□ 0.29
LRRK1-207ENST00000531270 STXBP4Q6ZWJ1 553 aa16.83■□□□□ 0.29
LRRK1-207ENST00000531270 SCAND2PQ9GZW5 306 aaPredicted RBP16.83■□□□□ 0.29
LRRK1-207ENST00000531270 TFIP11Q9UBB9 837 aaKnown RBP16.83■□□□□ 0.29
LRRK1-207ENST00000531270 BACH2Q9BYV9 841 aa16.83■□□□□ 0.29
LRRK1-207ENST00000531270 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.29
LRRK1-207ENST00000531270 TTC21AQ8NDW8 1320 aa16.83■□□□□ 0.28
LRRK1-207ENST00000531270 TAF7Q15545 349 aaPredicted RBP16.83■□□□□ 0.28
LRRK1-207ENST00000531270 TMEM67Q5HYA8 995 aa16.83■□□□□ 0.28
LRRK1-207ENST00000531270 SNRKQ9NRH2 765 aa16.83■□□□□ 0.28
LRRK1-207ENST00000531270 USP25Q9UHP3 1055 aa16.83■□□□□ 0.28
LRRK1-207ENST00000531270 MROH2BQ7Z745 1585 aa16.83■□□□□ 0.28
LRRK1-207ENST00000531270 ZWINTO95229 277 aa16.83■□□□□ 0.28
LRRK1-207ENST00000531270 C11orf95C9JLR9 678 aaPredicted RBP16.82■□□□□ 0.28
LRRK1-207ENST00000531270 F6X3S4 739 aa16.82■□□□□ 0.28
LRRK1-207ENST00000531270 TBCAO75347 108 aaKnown RBP16.82■□□□□ 0.28
LRRK1-207ENST00000531270 PSMC4P43686 418 aa16.82■□□□□ 0.28
LRRK1-207ENST00000531270 CEP112Q8N8E3 955 aa16.82■□□□□ 0.28
LRRK1-207ENST00000531270 ZBTB3Q9H5J0 574 aa16.82■□□□□ 0.28
LRRK1-207ENST00000531270 PHACTR2O75167 634 aa16.82■□□□□ 0.28
LRRK1-207ENST00000531270 KIAA0753Q2KHM9 967 aa16.82■□□□□ 0.28
LRRK1-207ENST00000531270 TIGD1Q96MW7 591 aa16.82■□□□□ 0.28
LRRK1-207ENST00000531270 UTP14AQ9BVJ6 771 aaKnown RBP16.82■□□□□ 0.28
LRRK1-207ENST00000531270 GDPD2Q9HCC8 539 aa16.82■□□□□ 0.28
LRRK1-207ENST00000531270 STX6O43752 255 aa16.82■□□□□ 0.28
LRRK1-207ENST00000531270 ZSCAN30Q86W11 494 aa16.82■□□□□ 0.28
LRRK1-207ENST00000531270 NFE2L2Q16236 605 aa16.82■□□□□ 0.28
LRRK1-207ENST00000531270 CIZ1Q9ULV3 898 aaPredicted RBP16.82■□□□□ 0.28
LRRK1-207ENST00000531270 CCDC63Q8NA47 563 aa16.81■□□□□ 0.28
LRRK1-207ENST00000531270 IQCGQ9H095 443 aaKnown RBP16.81■□□□□ 0.28
LRRK1-207ENST00000531270 MICU3Q86XE3 530 aa16.81■□□□□ 0.28
LRRK1-207ENST00000531270 SCAPERQ9BY12 1400 aa16.81■□□□□ 0.28
LRRK1-207ENST00000531270 CCDC160A6NGH7 325 aa16.81■□□□□ 0.28
LRRK1-207ENST00000531270 TMEM110-MUSTN1A8MSY1 372 aa16.81■□□□□ 0.28
LRRK1-207ENST00000531270 GOLIM4O00461 696 aa16.81■□□□□ 0.28
LRRK1-207ENST00000531270 SLC26A6Q9BXS9 759 aa16.81■□□□□ 0.28
LRRK1-207ENST00000531270 CCDC12Q8WUD4 166 aaPredicted RBP16.8■□□□□ 0.28
LRRK1-207ENST00000531270 HMGB1P09429 215 aaKnown RBP16.8■□□□□ 0.28
LRRK1-207ENST00000531270 SREK1Q8WXA9 508 aaKnown RBP16.8■□□□□ 0.28
LRRK1-207ENST00000531270 CGNQ9P2M7 1197 aaKnown RBP16.8■□□□□ 0.28
LRRK1-207ENST00000531270 USP16Q9Y5T5 823 aa16.8■□□□□ 0.28
LRRK1-207ENST00000531270 UBA7P41226 1012 aa16.8■□□□□ 0.28
LRRK1-207ENST00000531270 MRVI1Q9Y6F6 885 aa16.8■□□□□ 0.28
LRRK1-207ENST00000531270 HLA-DOAP06340 250 aa16.8■□□□□ 0.28
LRRK1-207ENST00000531270 FAM114A1Q8IWE2 563 aa16.8■□□□□ 0.28
LRRK1-207ENST00000531270 CFAP57Q96MR6 1250 aa16.8■□□□□ 0.28
LRRK1-207ENST00000531270 CLEC11AQ9Y240 323 aa16.8■□□□□ 0.28
LRRK1-207ENST00000531270 TBC1D5Q92609 795 aa16.79■□□□□ 0.28
LRRK1-207ENST00000531270 FAM212AQ96EL1 285 aa16.79■□□□□ 0.28
LRRK1-207ENST00000531270 TRIM47Q96LD4 638 aa16.79■□□□□ 0.28
LRRK1-207ENST00000531270 EXOC1Q9NV70 894 aa16.79■□□□□ 0.28
LRRK1-207ENST00000531270 F8W031 263 aaPredicted RBP16.79■□□□□ 0.28
LRRK1-207ENST00000531270 WWC3Q9ULE0 1092 aa16.79■□□□□ 0.28
LRRK1-207ENST00000531270 KIF5BP33176 963 aa16.79■□□□□ 0.28
LRRK1-207ENST00000531270 MPHOSPH6Q99547 160 aaKnown RBP16.79■□□□□ 0.28
LRRK1-207ENST00000531270 IARSP41252 1262 aaKnown RBP16.79■□□□□ 0.28
LRRK1-207ENST00000531270 CCDC6Q16204 474 aa16.79■□□□□ 0.28
LRRK1-207ENST00000531270 LRRC45Q96CN5 670 aa16.79■□□□□ 0.28
LRRK1-207ENST00000531270 SH2B1Q9NRF2 756 aaPredicted RBP16.79■□□□□ 0.28
LRRK1-207ENST00000531270 SH3BP5O60239 455 aa16.79■□□□□ 0.28
LRRK1-207ENST00000531270 HSF2BPO75031 334 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms