RNA–Protein interactions for RNA: ENST00000529189.5

LTBP3-212, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-212ENST00000529189 BCL11BQ9C0K0 894 aaPredicted RBP28.91■■■□□ 2.22
LTBP3-212ENST00000529189 CICQ96RK0 1608 aaPredicted RBP28.91■■■□□ 2.22
LTBP3-212ENST00000529189 STARD3NLO95772 234 aa28.9■■■□□ 2.22
LTBP3-212ENST00000529189 GNAI2P04899 355 aa28.9■■■□□ 2.22
LTBP3-212ENST00000529189 ATP6V1AP38606 617 aa28.9■■■□□ 2.22
LTBP3-212ENST00000529189 HMMRO75330 724 aa28.89■■■□□ 2.22
LTBP3-212ENST00000529189 CYP19A1P11511 503 aaPredicted RBP28.89■■■□□ 2.22
LTBP3-212ENST00000529189 AIMP1Q12904 312 aaKnown RBP28.88■■■□□ 2.21
LTBP3-212ENST00000529189 ITPK1Q13572 414 aa28.88■■■□□ 2.21
LTBP3-212ENST00000529189 XAGE3Q8WTP9 111 aa28.88■■■□□ 2.21
LTBP3-212ENST00000529189 ZNF831Q5JPB2 1677 aa28.87■■■□□ 2.21
LTBP3-212ENST00000529189 TRIM37O94972 964 aa28.87■■■□□ 2.21
LTBP3-212ENST00000529189 ADCY9O60503 1353 aa28.87■■■□□ 2.21
LTBP3-212ENST00000529189 COPS6Q7L5N1 327 aa28.86■■■□□ 2.21
LTBP3-212ENST00000529189 DNAAF4Q8WXU2 420 aa28.86■■■□□ 2.21
LTBP3-212ENST00000529189 DDRGK1Q96HY6 314 aa28.86■■■□□ 2.21
LTBP3-212ENST00000529189 LY75O60449 1722 aa28.85■■■□□ 2.21
LTBP3-212ENST00000529189 PI4KAP2A4QPH2 592 aa28.85■■■□□ 2.21
LTBP3-212ENST00000529189 PI4KAP1Q8N8J0 262 aa28.85■■■□□ 2.21
LTBP3-212ENST00000529189 SRCIN1Q9C0H9 1055 aa28.85■■■□□ 2.21
LTBP3-212ENST00000529189 COL5A3P25940 1745 aaPredicted RBP28.84■■■□□ 2.21
LTBP3-212ENST00000529189 ZBTB47Q9UFB7 747 aaPredicted RBP28.84■■■□□ 2.21
LTBP3-212ENST00000529189 KCNQ4P56696 695 aa28.83■■■□□ 2.21
LTBP3-212ENST00000529189 USP44Q9H0E7 712 aa28.82■■■□□ 2.2
LTBP3-212ENST00000529189 SEC24BO95487 1268 aa28.82■■■□□ 2.2
LTBP3-212ENST00000529189 DDX58O95786 925 aaKnown RBP28.82■■■□□ 2.2
LTBP3-212ENST00000529189 KSR2Q6VAB6 950 aa28.82■■■□□ 2.2
LTBP3-212ENST00000529189 ZBTB1Q9Y2K1 713 aa28.82■■■□□ 2.2
LTBP3-212ENST00000529189 MAP3K2Q9Y2U5 619 aa28.82■■■□□ 2.2
LTBP3-212ENST00000529189 UBTFL1P0CB47 393 aaPredicted RBP28.81■■■□□ 2.2
LTBP3-212ENST00000529189 BEND3Q5T5X7 828 aa28.81■■■□□ 2.2
LTBP3-212ENST00000529189 ZNF330Q9Y3S2 320 aaPredicted RBP28.81■■■□□ 2.2
LTBP3-212ENST00000529189 RREB1Q92766 1687 aa28.8■■■□□ 2.2
LTBP3-212ENST00000529189 CRKLP46109 303 aaKnown RBP28.79■■■□□ 2.2
LTBP3-212ENST00000529189 BMP2KLQ5H9B9 411 aa28.79■■■□□ 2.2
LTBP3-212ENST00000529189 LINC00116Q8NCU8 138 aa28.79■■■□□ 2.2
LTBP3-212ENST00000529189 CCNL1Q9UK58 526 aaPredicted RBP28.79■■■□□ 2.2
LTBP3-212ENST00000529189 TTLL7Q6ZT98 887 aa28.79■■■□□ 2.2
LTBP3-212ENST00000529189 UPF2Q9HAU5 1272 aaKnown RBP28.79■■■□□ 2.2
LTBP3-212ENST00000529189 CCDC87Q9NVE4 849 aa28.79■■■□□ 2.2
LTBP3-212ENST00000529189 LRRFIP2Q9Y608 721 aaKnown RBP28.79■■■□□ 2.2
LTBP3-212ENST00000529189 INTS5Q6P9B9 1019 aaKnown RBP28.78■■■□□ 2.2
LTBP3-212ENST00000529189 RIC3Q7Z5B4 369 aa28.78■■■□□ 2.2
LTBP3-212ENST00000529189 MYH14Q7Z406 1995 aaKnown RBP28.78■■■□□ 2.2
LTBP3-212ENST00000529189 ARFGEF2Q9Y6D5 1785 aa28.77■■■□□ 2.2
LTBP3-212ENST00000529189 ATP8B2P98198 1209 aa28.77■■■□□ 2.2
LTBP3-212ENST00000529189 ANKRD13DQ6ZTN6 518 aa28.77■■■□□ 2.2
LTBP3-212ENST00000529189 NUP188Q5SRE5 1749 aa28.75■■■□□ 2.19
LTBP3-212ENST00000529189 PLBD2Q8NHP8 589 aa28.74■■■□□ 2.19
LTBP3-212ENST00000529189 TAF1LQ8IZX4 1826 aa28.74■■■□□ 2.19
LTBP3-212ENST00000529189 ALDH1L1O75891 902 aa28.73■■■□□ 2.19
LTBP3-212ENST00000529189 IL6STP40189 918 aaPredicted RBP28.73■■■□□ 2.19
LTBP3-212ENST00000529189 PLEKHM2Q8IWE5 1019 aa28.73■■■□□ 2.19
LTBP3-212ENST00000529189 TNS1Q9HBL0 1735 aaKnown RBP28.73■■■□□ 2.19
LTBP3-212ENST00000529189 ZBTB3Q9H5J0 574 aa28.72■■■□□ 2.19
LTBP3-212ENST00000529189 PNMA6EA0A0J9YXQ4 647 aa28.71■■■□□ 2.19
LTBP3-212ENST00000529189 CNTNAP4Q9C0A0 1308 aa28.71■■■□□ 2.19
LTBP3-212ENST00000529189 METTL22Q9BUU2 404 aaPredicted RBP28.71■■■□□ 2.19
LTBP3-212ENST00000529189 APBB1O00213 710 aa28.7■■■□□ 2.19
LTBP3-212ENST00000529189 ARXQ96QS3 562 aa28.7■■■□□ 2.19
LTBP3-212ENST00000529189 SMARCA5O60264 1052 aaPredicted RBP28.7■■■□□ 2.18
LTBP3-212ENST00000529189 EIF5P55010 431 aaKnown RBP28.7■■■□□ 2.18
LTBP3-212ENST00000529189 KIF6Q6ZMV9 814 aa28.7■■■□□ 2.18
LTBP3-212ENST00000529189 MYD88Q99836 296 aa28.7■■■□□ 2.18
LTBP3-212ENST00000529189 LRRC4BQ9NT99 713 aa28.7■■■□□ 2.18
LTBP3-212ENST00000529189 CWF19L2Q2TBE0 894 aaKnown RBP28.69■■■□□ 2.18
LTBP3-212ENST00000529189 APBA3O96018 575 aa28.68■■■□□ 2.18
LTBP3-212ENST00000529189 NBPF7P0C2Y1 421 aaPredicted RBP28.68■■■□□ 2.18
LTBP3-212ENST00000529189 LINS1Q8NG48 757 aa28.68■■■□□ 2.18
LTBP3-212ENST00000529189 TBC1D32Q96NH3 1257 aa28.68■■■□□ 2.18
LTBP3-212ENST00000529189 C4BP0C0L5 1744 aa28.68■■■□□ 2.18
LTBP3-212ENST00000529189 NEXNQ0ZGT2 675 aa28.68■■■□□ 2.18
LTBP3-212ENST00000529189 C16orf71Q8IYS4 520 aaPredicted RBP28.68■■■□□ 2.18
LTBP3-212ENST00000529189 EXOC6BQ9Y2D4 811 aa28.68■■■□□ 2.18
LTBP3-212ENST00000529189 IGKV5-2P06315 115 aa28.67■■■□□ 2.18
LTBP3-212ENST00000529189 SSH3Q8TE77 659 aa28.67■■■□□ 2.18
LTBP3-212ENST00000529189 IBTKQ9P2D0 1353 aaPredicted RBP28.66■■■□□ 2.18
LTBP3-212ENST00000529189 SLC27A3Q5K4L6 730 aa28.66■■■□□ 2.18
LTBP3-212ENST00000529189 TTC22Q5TAA0 569 aa28.66■■■□□ 2.18
LTBP3-212ENST00000529189 MAP3K15Q6ZN16 1313 aa28.66■■■□□ 2.18
LTBP3-212ENST00000529189 AFDNP55196 1824 aaKnown RBP28.65■■■□□ 2.18
LTBP3-212ENST00000529189 RC3H1Q5TC82 1133 aaKnown RBP28.65■■■□□ 2.18
LTBP3-212ENST00000529189 DZIP3Q86Y13 1208 aaKnown RBP28.65■■■□□ 2.18
LTBP3-212ENST00000529189 TBC1D2BQ9UPU7 963 aa28.65■■■□□ 2.18
LTBP3-212ENST00000529189 HDAC5Q9UQL6 1122 aa28.65■■■□□ 2.18
LTBP3-212ENST00000529189 COL15A1P39059 1388 aa28.65■■■□□ 2.18
LTBP3-212ENST00000529189 MFAP1P55081 439 aaKnown RBP28.64■■■□□ 2.18
LTBP3-212ENST00000529189 C9orf78Q9NZ63 289 aaPredicted RBP28.64■■■□□ 2.18
LTBP3-212ENST00000529189 NEURL1BA8MQ27 555 aa28.64■■■□□ 2.17
LTBP3-212ENST00000529189 POLA2Q14181 598 aa28.64■■■□□ 2.17
LTBP3-212ENST00000529189 TXNRD1Q16881 649 aa28.64■■■□□ 2.17
LTBP3-212ENST00000529189 PPP1R42Q7Z4L9 355 aa28.64■■■□□ 2.17
LTBP3-212ENST00000529189 OTUD7AQ8TE49 926 aaPredicted RBP28.64■■■□□ 2.17
LTBP3-212ENST00000529189 LRRCC1Q9C099 1032 aa28.64■■■□□ 2.17
LTBP3-212ENST00000529189 ATP5J2-PTCD1G3V325 749 aa28.63■■■□□ 2.17
LTBP3-212ENST00000529189 GSPT1P15170 499 aaKnown RBP28.63■■■□□ 2.17
LTBP3-212ENST00000529189 PLSCR1O15162 318 aa28.62■■■□□ 2.17
LTBP3-212ENST00000529189 GNPATO15228 680 aa28.62■■■□□ 2.17
LTBP3-212ENST00000529189 PROM2Q8N271 834 aa28.62■■■□□ 2.17
LTBP3-212ENST00000529189 DAXXQ9UER7 740 aaPredicted RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms