RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 FAM177BA6PVY3 158 aa17.7■□□□□ 0.42
DDR1-271ENST00000513240 HTATSF1O43719 755 aaKnown RBP17.7■□□□□ 0.42
DDR1-271ENST00000513240 MAPK8IP2Q13387 824 aaPredicted RBP17.7■□□□□ 0.42
DDR1-271ENST00000513240 ZNF830Q96NB3 372 aaPredicted RBP17.7■□□□□ 0.42
DDR1-271ENST00000513240 ATP5J2-PTCD1G3V325 749 aa17.69■□□□□ 0.42
DDR1-271ENST00000513240 PTCD1O75127 700 aaKnown RBP17.69■□□□□ 0.42
DDR1-271ENST00000513240 GADD45BO75293 160 aaPredicted RBP17.69■□□□□ 0.42
DDR1-271ENST00000513240 PTH1RQ03431 593 aa17.69■□□□□ 0.42
DDR1-271ENST00000513240 ZSCAN23Q3MJ62 389 aa17.69■□□□□ 0.42
DDR1-271ENST00000513240 PI4K2BQ8TCG2 481 aa17.69■□□□□ 0.42
DDR1-271ENST00000513240 IPO4Q8TEX9 1081 aaKnown RBP17.69■□□□□ 0.42
DDR1-271ENST00000513240 NUCB2P80303 420 aa17.69■□□□□ 0.42
DDR1-271ENST00000513240 PAXIP1Q6ZW49 1069 aaPredicted RBP17.69■□□□□ 0.42
DDR1-271ENST00000513240 AACSQ86V21 672 aa17.69■□□□□ 0.42
DDR1-271ENST00000513240 RBSNQ9H1K0 784 aa17.69■□□□□ 0.42
DDR1-271ENST00000513240 BOLA2Q9H3K6 86 aa17.69■□□□□ 0.42
DDR1-271ENST00000513240 ADCY9O60503 1353 aa17.68■□□□□ 0.42
DDR1-271ENST00000513240 PPFIA3O75145 1194 aa17.68■□□□□ 0.42
DDR1-271ENST00000513240 GIGYF1O75420 1035 aaPredicted RBP17.68■□□□□ 0.42
DDR1-271ENST00000513240 SUCLG2Q96I99 432 aa17.68■□□□□ 0.42
DDR1-271ENST00000513240 AKAP4Q5JQC9 854 aa17.68■□□□□ 0.42
DDR1-271ENST00000513240 TMEM63CQ9P1W3 806 aa17.68■□□□□ 0.42
DDR1-271ENST00000513240 ZKSCAN5Q9Y2L8 839 aa17.68■□□□□ 0.42
DDR1-271ENST00000513240 ATP2B3Q16720 1220 aa17.67■□□□□ 0.42
DDR1-271ENST00000513240 ADCK5Q3MIX3 580 aa17.67■□□□□ 0.42
DDR1-271ENST00000513240 PRPF40BQ6NWY9 871 aaKnown RBP17.67■□□□□ 0.42
DDR1-271ENST00000513240 RIC3Q7Z5B4 369 aa17.67■□□□□ 0.42
DDR1-271ENST00000513240 ARHGEF25Q86VW2 580 aa17.67■□□□□ 0.42
DDR1-271ENST00000513240 FAM227BQ96M60 508 aa17.67■□□□□ 0.42
DDR1-271ENST00000513240 BICC1Q9H694 974 aaKnown RBP17.67■□□□□ 0.42
DDR1-271ENST00000513240 PXDNQ92626 1479 aa17.67■□□□□ 0.42
DDR1-271ENST00000513240 KIF20AO95235 890 aa17.67■□□□□ 0.42
DDR1-271ENST00000513240 LARGE1O95461 756 aa17.67■□□□□ 0.42
DDR1-271ENST00000513240 MCCP23508 829 aa17.67■□□□□ 0.42
DDR1-271ENST00000513240 CHMP3Q9Y3E7 222 aa17.67■□□□□ 0.42
DDR1-271ENST00000513240 SLFNL1Q499Z3 407 aa17.66■□□□□ 0.42
DDR1-271ENST00000513240 ZNF330Q9Y3S2 320 aaPredicted RBP17.66■□□□□ 0.42
DDR1-271ENST00000513240 USP16Q9Y5T5 823 aa17.66■□□□□ 0.42
DDR1-271ENST00000513240 RGPD1P0DJD0 1748 aa17.66■□□□□ 0.42
DDR1-271ENST00000513240 NWD1Q149M9 1564 aa17.66■□□□□ 0.42
DDR1-271ENST00000513240 CYP2E1P05181 493 aaPredicted RBP17.66■□□□□ 0.42
DDR1-271ENST00000513240 NECAB1Q8N987 351 aa17.66■□□□□ 0.42
DDR1-271ENST00000513240 GTPBP4Q9BZE4 634 aaKnown RBP17.66■□□□□ 0.42
DDR1-271ENST00000513240 TAF6LQ9Y6J9 622 aa17.66■□□□□ 0.42
DDR1-271ENST00000513240 SPDYE4A6NLX3 237 aa17.65■□□□□ 0.42
DDR1-271ENST00000513240 IFIT2P09913 472 aaKnown RBP17.65■□□□□ 0.42
DDR1-271ENST00000513240 CSPP1Q1MSJ5 1256 aa17.65■□□□□ 0.42
DDR1-271ENST00000513240 KLHL40Q2TBA0 621 aa17.65■□□□□ 0.42
DDR1-271ENST00000513240 EPHA10Q5JZY3 1008 aa17.65■□□□□ 0.42
DDR1-271ENST00000513240 KIF1BPQ96EK5 621 aa17.65■□□□□ 0.42
DDR1-271ENST00000513240 TOPAZ1Q8N9V7 1692 aa17.65■□□□□ 0.42
DDR1-271ENST00000513240 CASTP20810 708 aaKnown RBP17.65■□□□□ 0.42
DDR1-271ENST00000513240 TAF7LQ5H9L4 462 aa17.65■□□□□ 0.42
DDR1-271ENST00000513240 ZNF710Q8N1W2 664 aa17.65■□□□□ 0.42
DDR1-271ENST00000513240 CGNQ9P2M7 1197 aaKnown RBP17.65■□□□□ 0.42
DDR1-271ENST00000513240 DBF4Q9UBU7 674 aaPredicted RBP17.65■□□□□ 0.42
DDR1-271ENST00000513240 COPS6Q7L5N1 327 aa17.65■□□□□ 0.42
DDR1-271ENST00000513240 MYD88Q99836 296 aa17.65■□□□□ 0.42
DDR1-271ENST00000513240 SNX14Q9Y5W7 946 aa17.65■□□□□ 0.42
DDR1-271ENST00000513240 KCNJ4P48050 445 aa17.64■□□□□ 0.41
DDR1-271ENST00000513240 DNTTIP2Q5QJE6 756 aaKnown RBP17.64■□□□□ 0.41
DDR1-271ENST00000513240 XAGE3Q8WTP9 111 aa17.64■□□□□ 0.41
DDR1-271ENST00000513240 DIAPH3Q9NSV4 1193 aa17.64■□□□□ 0.41
DDR1-271ENST00000513240 ARHGAP23Q9P227 1491 aa17.64■□□□□ 0.41
DDR1-271ENST00000513240 AK2P54819 239 aa17.64■□□□□ 0.41
DDR1-271ENST00000513240 POLA2Q14181 598 aa17.64■□□□□ 0.41
DDR1-271ENST00000513240 KAZALD1Q96I82 304 aa17.64■□□□□ 0.41
DDR1-271ENST00000513240 STAP2Q9UGK3 403 aa17.64■□□□□ 0.41
DDR1-271ENST00000513240 TAOK2Q9UL54 1235 aa17.64■□□□□ 0.41
DDR1-271ENST00000513240 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.63■□□□□ 0.41
DDR1-271ENST00000513240 LETM1O95202 739 aaPredicted RBP17.63■□□□□ 0.41
DDR1-271ENST00000513240 HS1BP3Q53T59 392 aa17.63■□□□□ 0.41
DDR1-271ENST00000513240 CLASRPQ8N2M8 674 aaKnown RBP17.63■□□□□ 0.41
DDR1-271ENST00000513240 KCNH5Q8NCM2 988 aa17.63■□□□□ 0.41
DDR1-271ENST00000513240 EAF2Q96CJ1 260 aaPredicted RBP17.63■□□□□ 0.41
DDR1-271ENST00000513240 CCDC83Q8IWF9 413 aa17.63■□□□□ 0.41
DDR1-271ENST00000513240 HSPA2P54652 639 aa17.62■□□□□ 0.41
DDR1-271ENST00000513240 ZNF496Q96IT1 587 aaPredicted RBP17.62■□□□□ 0.41
DDR1-271ENST00000513240 SGSM2O43147 1006 aa17.62■□□□□ 0.41
DDR1-271ENST00000513240 FAM173BQ6P4H8 233 aa17.62■□□□□ 0.41
DDR1-271ENST00000513240 RAPGEF4Q8WZA2 1011 aa17.62■□□□□ 0.41
DDR1-271ENST00000513240 JAKMIP1Q96N16 626 aaKnown RBP17.62■□□□□ 0.41
DDR1-271ENST00000513240 CCDC85AQ96PX6 553 aaPredicted RBP17.62■□□□□ 0.41
DDR1-271ENST00000513240 CEMIPQ8WUJ3 1361 aa17.62■□□□□ 0.41
DDR1-271ENST00000513240 SASH1O94885 1247 aa17.62■□□□□ 0.41
DDR1-271ENST00000513240 STK3Q13188 491 aa17.62■□□□□ 0.41
DDR1-271ENST00000513240 KSR2Q6VAB6 950 aa17.62■□□□□ 0.41
DDR1-271ENST00000513240 CNTROBQ8N137 903 aa17.62■□□□□ 0.41
DDR1-271ENST00000513240 PDLIM2Q96JY6 352 aa17.62■□□□□ 0.41
DDR1-271ENST00000513240 IGKV5-2P06315 115 aa17.61■□□□□ 0.41
DDR1-271ENST00000513240 CNPY2Q9Y2B0 182 aa17.61■□□□□ 0.41
DDR1-271ENST00000513240 SLIT1O75093 1534 aa17.61■□□□□ 0.41
DDR1-271ENST00000513240 FOSBP53539 338 aa17.61■□□□□ 0.41
DDR1-271ENST00000513240 RUFY3Q7L099 469 aa17.61■□□□□ 0.41
DDR1-271ENST00000513240 LSG1Q9H089 658 aaKnown RBP17.61■□□□□ 0.41
DDR1-271ENST00000513240 CWC22Q9HCG8 908 aaKnown RBP17.61■□□□□ 0.41
DDR1-271ENST00000513240 FERMT3Q86UX7 667 aa17.6■□□□□ 0.41
DDR1-271ENST00000513240 FIBPO43427 364 aa17.6■□□□□ 0.41
DDR1-271ENST00000513240 HSPA4P34932 840 aa17.6■□□□□ 0.41
DDR1-271ENST00000513240 NALCNQ8IZF0 1738 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms