RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 TTLL7Q6ZT98 887 aa20.64■□□□□ 0.89
DDX41-214ENST00000512334 MAP3K15Q6ZN16 1313 aa20.63■□□□□ 0.89
DDX41-214ENST00000512334 ELL2O00472 640 aaPredicted RBP20.63■□□□□ 0.89
DDX41-214ENST00000512334 DPEP1P16444 411 aa20.63■□□□□ 0.89
DDX41-214ENST00000512334 HLFQ16534 295 aa20.63■□□□□ 0.89
DDX41-214ENST00000512334 NRXN2Q9P2S2 1712 aa20.63■□□□□ 0.89
DDX41-214ENST00000512334 KIAA1551Q9HCM1 1747 aa20.62■□□□□ 0.89
DDX41-214ENST00000512334 PDIA6Q15084 440 aa20.62■□□□□ 0.89
DDX41-214ENST00000512334 DIEXFQ68CQ4 756 aaKnown RBP20.62■□□□□ 0.89
DDX41-214ENST00000512334 TSR2Q969E8 191 aaKnown RBP20.62■□□□□ 0.89
DDX41-214ENST00000512334 ZBTB3Q9H5J0 574 aa20.62■□□□□ 0.89
DDX41-214ENST00000512334 NIP7Q9Y221 180 aaKnown RBP eCLIP20.62■□□□□ 0.89
DDX41-214ENST00000512334 ERVV-1B6SEH8 477 aa20.61■□□□□ 0.89
DDX41-214ENST00000512334 RGL2O15211 777 aa20.61■□□□□ 0.89
DDX41-214ENST00000512334 GRIN3BO60391 1043 aa20.61■□□□□ 0.89
DDX41-214ENST00000512334 CHPF2Q9P2E5 772 aa20.61■□□□□ 0.89
DDX41-214ENST00000512334 CCER2I3L3R5 266 aa20.6■□□□□ 0.89
DDX41-214ENST00000512334 CHRNA5P30532 468 aa20.6■□□□□ 0.89
DDX41-214ENST00000512334 AIMP1Q12904 312 aaKnown RBP20.6■□□□□ 0.89
DDX41-214ENST00000512334 CCDC24Q8N4L8 307 aa20.6■□□□□ 0.89
DDX41-214ENST00000512334 CNBD1Q8NA66 436 aa20.6■□□□□ 0.89
DDX41-214ENST00000512334 DDX21Q9NR30 783 aaKnown RBP eCLIP20.6■□□□□ 0.89
DDX41-214ENST00000512334 IL16Q14005 1332 aa20.59■□□□□ 0.89
DDX41-214ENST00000512334 FAM177BA6PVY3 158 aa20.59■□□□□ 0.89
DDX41-214ENST00000512334 ST5P78524 1137 aa20.59■□□□□ 0.89
DDX41-214ENST00000512334 PRR5LQ6MZQ0 368 aa20.59■□□□□ 0.89
DDX41-214ENST00000512334 LRP10Q7Z4F1 713 aa20.59■□□□□ 0.89
DDX41-214ENST00000512334 NBPF5PQ86XG9 351 aaPredicted RBP20.59■□□□□ 0.89
DDX41-214ENST00000512334 C8orf58Q8NAV2 365 aa20.59■□□□□ 0.89
DDX41-214ENST00000512334 XAGE3Q8WTP9 111 aa20.59■□□□□ 0.89
DDX41-214ENST00000512334 DBF4Q9UBU7 674 aaPredicted RBP20.59■□□□□ 0.89
DDX41-214ENST00000512334 BCS1LQ9Y276 419 aa20.59■□□□□ 0.89
DDX41-214ENST00000512334 GOLGB1Q14789 3259 aaKnown RBP20.58■□□□□ 0.89
DDX41-214ENST00000512334 NUP98P52948 1817 aa20.58■□□□□ 0.89
DDX41-214ENST00000512334 YY1P25490 414 aa20.58■□□□□ 0.89
DDX41-214ENST00000512334 COPS6Q7L5N1 327 aa20.58■□□□□ 0.89
DDX41-214ENST00000512334 WDR63Q8IWG1 891 aa20.58■□□□□ 0.89
DDX41-214ENST00000512334 KCNA3P22001 575 aa20.57■□□□□ 0.88
DDX41-214ENST00000512334 PIM2Q9P1W9 311 aa20.57■□□□□ 0.88
DDX41-214ENST00000512334 GPTP24298 496 aa20.56■□□□□ 0.88
DDX41-214ENST00000512334 C2CD5Q86YS7 1000 aa20.56■□□□□ 0.88
DDX41-214ENST00000512334 UTRNP46939 3433 aa20.56■□□□□ 0.88
DDX41-214ENST00000512334 CHD4Q14839 1912 aa20.55■□□□□ 0.88
DDX41-214ENST00000512334 GTF2E1P29083 439 aaPredicted RBP20.55■□□□□ 0.88
DDX41-214ENST00000512334 PDE6BP35913 854 aa20.55■□□□□ 0.88
DDX41-214ENST00000512334 TPTE2Q6XPS3 522 aa20.55■□□□□ 0.88
DDX41-214ENST00000512334 GIGYF2Q6Y7W6 1299 aaKnown RBP20.55■□□□□ 0.88
DDX41-214ENST00000512334 TSPYL6Q8N831 410 aa20.55■□□□□ 0.88
DDX41-214ENST00000512334 BRIP1Q9BX63 1249 aa20.55■□□□□ 0.88
DDX41-214ENST00000512334 FANCIQ9NVI1 1328 aa20.54■□□□□ 0.88
DDX41-214ENST00000512334 ATP10DQ9P241 1426 aa20.54■□□□□ 0.88
DDX41-214ENST00000512334 BRCA1P38398 1863 aaKnown RBP20.54■□□□□ 0.88
DDX41-214ENST00000512334 H0YIN7 160 aa20.54■□□□□ 0.88
DDX41-214ENST00000512334 CHMP4AQ9BY43 222 aa20.54■□□□□ 0.88
DDX41-214ENST00000512334 HYPKQ9NX55 129 aa20.54■□□□□ 0.88
DDX41-214ENST00000512334 DALRD3Q5D0E6 543 aaKnown RBP20.53■□□□□ 0.88
DDX41-214ENST00000512334 CCDC30Q5VVM6 783 aa20.53■□□□□ 0.88
DDX41-214ENST00000512334 ANKRD31Q8N7Z5 1873 aa20.53■□□□□ 0.88
DDX41-214ENST00000512334 TWISTNBQ3B726 338 aaPredicted RBP20.52■□□□□ 0.88
DDX41-214ENST00000512334 MIER1Q8N108 512 aa20.52■□□□□ 0.88
DDX41-214ENST00000512334 NYXQ9GZU5 481 aa20.52■□□□□ 0.88
DDX41-214ENST00000512334 UBN2Q6ZU65 1347 aa20.52■□□□□ 0.87
DDX41-214ENST00000512334 GOLGA2Q08379 1002 aa20.51■□□□□ 0.87
DDX41-214ENST00000512334 HSP90AB3PQ58FF7 597 aa20.51■□□□□ 0.87
DDX41-214ENST00000512334 ZNF34Q8IZ26 560 aa20.51■□□□□ 0.87
DDX41-214ENST00000512334 ZNF622Q969S3 477 aaKnown RBP eCLIP20.51■□□□□ 0.87
DDX41-214ENST00000512334 PDZRN3Q9UPQ7 1066 aa20.51■□□□□ 0.87
DDX41-214ENST00000512334 ANKRD13DQ6ZTN6 518 aa20.5■□□□□ 0.87
DDX41-214ENST00000512334 NUTM1Q86Y26 1132 aa20.5■□□□□ 0.87
DDX41-214ENST00000512334 MYH16Q9H6N6 1097 aa20.5■□□□□ 0.87
DDX41-214ENST00000512334 SPINK5Q9NQ38 1064 aaPredicted RBP20.5■□□□□ 0.87
DDX41-214ENST00000512334 DLEC1Q9Y238 1755 aa20.49■□□□□ 0.87
DDX41-214ENST00000512334 TCERG1O14776 1098 aaKnown RBP20.49■□□□□ 0.87
DDX41-214ENST00000512334 SUSD4Q5VX71 490 aa20.49■□□□□ 0.87
DDX41-214ENST00000512334 ARHGAP27Q6ZUM4 889 aa20.49■□□□□ 0.87
DDX41-214ENST00000512334 TTLL6Q8N841 843 aa20.49■□□□□ 0.87
DDX41-214ENST00000512334 PLBD2Q8NHP8 589 aa20.49■□□□□ 0.87
DDX41-214ENST00000512334 STK31Q9BXU1 1019 aa20.49■□□□□ 0.87
DDX41-214ENST00000512334 PHAXQ9H814 394 aaKnown RBP20.49■□□□□ 0.87
DDX41-214ENST00000512334 EXOSC9Q06265 439 aaKnown RBP20.48■□□□□ 0.87
DDX41-214ENST00000512334 PARP10Q53GL7 1025 aa20.48■□□□□ 0.87
DDX41-214ENST00000512334 PPP1R42Q7Z4L9 355 aa20.48■□□□□ 0.87
DDX41-214ENST00000512334 ARFGEF1Q9Y6D6 1849 aa20.48■□□□□ 0.87
DDX41-214ENST00000512334 COL11A2P13942 1736 aaPredicted RBP20.47■□□□□ 0.87
DDX41-214ENST00000512334 ANKRD36CQ5JPF3 1778 aa20.47■□□□□ 0.87
DDX41-214ENST00000512334 TCIRG1Q13488 830 aa20.47■□□□□ 0.87
DDX41-214ENST00000512334 ERFEQ4G0M1 354 aa20.47■□□□□ 0.87
DDX41-214ENST00000512334 RIC3Q7Z5B4 369 aa20.47■□□□□ 0.87
DDX41-214ENST00000512334 ZNF521Q96K83 1311 aa20.47■□□□□ 0.87
DDX41-214ENST00000512334 ABCC12Q96J65 1359 aa20.46■□□□□ 0.87
DDX41-214ENST00000512334 IBTKQ9P2D0 1353 aaPredicted RBP20.46■□□□□ 0.87
DDX41-214ENST00000512334 MASTLQ96GX5 879 aa20.46■□□□□ 0.87
DDX41-214ENST00000512334 UTP14AQ9BVJ6 771 aaKnown RBP20.46■□□□□ 0.87
DDX41-214ENST00000512334 NTSR2O95665 410 aa20.45■□□□□ 0.86
DDX41-214ENST00000512334 SRGNP10124 158 aa20.45■□□□□ 0.86
DDX41-214ENST00000512334 DDX58O95786 925 aaKnown RBP20.44■□□□□ 0.86
DDX41-214ENST00000512334 STYK1Q6J9G0 422 aa20.44■□□□□ 0.86
DDX41-214ENST00000512334 NLRP10Q86W26 655 aa20.44■□□□□ 0.86
DDX41-214ENST00000512334 CNKSR1Q969H4 720 aa20.44■□□□□ 0.86
DDX41-214ENST00000512334 ZNF428Q96B54 188 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms