RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 C21orf2O43822 256 aa10.62□□□□□ -0.71
RFC1-213ENST00000512275 MARSP56192 900 aaKnown RBP10.62□□□□□ -0.71
RFC1-213ENST00000512275 CYP2U1Q7Z449 544 aa10.62□□□□□ -0.71
RFC1-213ENST00000512275 TNS4Q8IZW8 715 aa10.62□□□□□ -0.71
RFC1-213ENST00000512275 WASF2Q9Y6W5 498 aa10.62□□□□□ -0.71
RFC1-213ENST00000512275 UHRF1BP1LA0JNW5 1464 aa10.61□□□□□ -0.71
RFC1-213ENST00000512275 ATP10BO94823 1461 aa10.61□□□□□ -0.71
RFC1-213ENST00000512275 WFS1O76024 890 aa10.61□□□□□ -0.71
RFC1-213ENST00000512275 GNRH1P01148 92 aa10.61□□□□□ -0.71
RFC1-213ENST00000512275 FOXK2Q01167 660 aa10.61□□□□□ -0.71
RFC1-213ENST00000512275 GAS2L2Q8NHY3 880 aa10.61□□□□□ -0.71
RFC1-213ENST00000512275 BIN2Q9UBW5 565 aaPredicted RBP10.61□□□□□ -0.71
RFC1-213ENST00000512275 KIF14Q15058 1648 aa10.61□□□□□ -0.71
RFC1-213ENST00000512275 MTUS2Q5JR59 1369 aa10.61□□□□□ -0.71
RFC1-213ENST00000512275 ADD1P35611 737 aaKnown RBP10.6□□□□□ -0.71
RFC1-213ENST00000512275 NFX1Q12986 1120 aaKnown RBP10.6□□□□□ -0.71
RFC1-213ENST00000512275 SF3B2Q13435 895 aaKnown RBP10.6□□□□□ -0.71
RFC1-213ENST00000512275 TSPAN10Q9H1Z9 355 aaPredicted RBP10.6□□□□□ -0.71
RFC1-213ENST00000512275 ANO2Q9NQ90 1003 aa10.6□□□□□ -0.71
RFC1-213ENST00000512275 MTFR1Q15390 333 aa10.59□□□□□ -0.71
RFC1-213ENST00000512275 GLYCTKQ8IVS8 523 aa10.59□□□□□ -0.71
RFC1-213ENST00000512275 SCG3Q8WXD2 468 aaKnown RBP10.59□□□□□ -0.71
RFC1-213ENST00000512275 KIFC2Q96AC6 838 aa10.59□□□□□ -0.71
RFC1-213ENST00000512275 ARHGAP4P98171 946 aa10.58□□□□□ -0.72
RFC1-213ENST00000512275 FKBP4Q02790 459 aaKnown RBP eCLIP10.58□□□□□ -0.72
RFC1-213ENST00000512275 HELQQ8TDG4 1101 aa10.58□□□□□ -0.72
RFC1-213ENST00000512275 SERTAD1Q9UHV2 236 aa10.58□□□□□ -0.72
RFC1-213ENST00000512275 EMILIN1Q9Y6C2 1016 aa10.58□□□□□ -0.72
RFC1-213ENST00000512275 KDM5BQ9UGL1 1544 aa10.58□□□□□ -0.72
RFC1-213ENST00000512275 NCOA2Q15596 1464 aa10.57□□□□□ -0.72
RFC1-213ENST00000512275 ATAD2Q6PL18 1390 aa10.57□□□□□ -0.72
RFC1-213ENST00000512275 UNCXA6NJT0 531 aa10.57□□□□□ -0.72
RFC1-213ENST00000512275 E9PSI1 815 aa10.57□□□□□ -0.72
RFC1-213ENST00000512275 NPR3P17342 541 aa10.57□□□□□ -0.72
RFC1-213ENST00000512275 MTMR3Q13615 1198 aa10.57□□□□□ -0.72
RFC1-213ENST00000512275 ESCO1Q5FWF5 840 aa10.57□□□□□ -0.72
RFC1-213ENST00000512275 NPAS4Q8IUM7 802 aa10.57□□□□□ -0.72
RFC1-213ENST00000512275 PGPEP1Q9NXJ5 209 aa10.57□□□□□ -0.72
RFC1-213ENST00000512275 SCHIP1Q9P0W5 487 aaPredicted RBP10.57□□□□□ -0.72
RFC1-213ENST00000512275 TROQ12816 1431 aaPredicted RBP10.57□□□□□ -0.72
RFC1-213ENST00000512275 CAPN5O15484 640 aaPredicted RBP10.56□□□□□ -0.72
RFC1-213ENST00000512275 BMP1P13497 986 aa10.56□□□□□ -0.72
RFC1-213ENST00000512275 STAG2Q8N3U4 1231 aa10.56□□□□□ -0.72
RFC1-213ENST00000512275 HRH3Q9Y5N1 445 aa10.56□□□□□ -0.72
RFC1-213ENST00000512275 A0A1W2PRU2 124 aa10.55□□□□□ -0.72
RFC1-213ENST00000512275 IL2RAP01589 272 aa10.55□□□□□ -0.72
RFC1-213ENST00000512275 SMTNP53814 917 aa10.55□□□□□ -0.72
RFC1-213ENST00000512275 POTEAQ6S8J7 498 aa10.55□□□□□ -0.72
RFC1-213ENST00000512275 TRIM46Q7Z4K8 759 aa10.55□□□□□ -0.72
RFC1-213ENST00000512275 KDF1Q8NAX2 398 aaPredicted RBP10.55□□□□□ -0.72
RFC1-213ENST00000512275 XAGE2Q96GT9 111 aa10.55□□□□□ -0.72
RFC1-213ENST00000512275 ARHGEF10LQ9HCE6 1279 aa10.55□□□□□ -0.72
RFC1-213ENST00000512275 CDC42BPAQ5VT25 1732 aa10.55□□□□□ -0.72
RFC1-213ENST00000512275 PHLDB1Q86UU1 1377 aa10.54□□□□□ -0.72
RFC1-213ENST00000512275 ITSN2Q9NZM3 1697 aa10.54□□□□□ -0.72
RFC1-213ENST00000512275 A6NJY4 79 aa10.54□□□□□ -0.72
RFC1-213ENST00000512275 NAA30Q147X3 362 aaPredicted RBP10.54□□□□□ -0.72
RFC1-213ENST00000512275 SLC9A9Q8IVB4 645 aa10.54□□□□□ -0.72
RFC1-213ENST00000512275 RAB6BQ9NRW1 208 aa10.54□□□□□ -0.72
RFC1-213ENST00000512275 CDK11AQ9UQ88 783 aaPredicted RBP10.54□□□□□ -0.72
RFC1-213ENST00000512275 TTC37Q6PGP7 1564 aa10.53□□□□□ -0.72
RFC1-213ENST00000512275 ANKRD33BA6NCL7 494 aa10.53□□□□□ -0.72
RFC1-213ENST00000512275 TERTO14746 1132 aaKnown RBP10.53□□□□□ -0.72
RFC1-213ENST00000512275 ADH1AP07327 375 aa10.53□□□□□ -0.72
RFC1-213ENST00000512275 CYB5RLQ6IPT4 315 aa10.53□□□□□ -0.72
RFC1-213ENST00000512275 C2orf49Q9BVC5 232 aaPredicted RBP10.53□□□□□ -0.72
RFC1-213ENST00000512275 DCTN4Q9UJW0 460 aa10.53□□□□□ -0.72
RFC1-213ENST00000512275 IQSEC3Q9UPP2 1182 aaPredicted RBP10.53□□□□□ -0.72
RFC1-213ENST00000512275 PPP1R12BO60237 982 aaPredicted RBP10.52□□□□□ -0.73
RFC1-213ENST00000512275 NNTQ13423 1086 aa10.52□□□□□ -0.73
RFC1-213ENST00000512275 USP3Q9Y6I4 520 aa10.52□□□□□ -0.73
RFC1-213ENST00000512275 MYO5CQ9NQX4 1742 aa10.52□□□□□ -0.73
RFC1-213ENST00000512275 PLEKHD1A6NEE1 506 aa10.51□□□□□ -0.73
RFC1-213ENST00000512275 TBCELQ5QJ74 424 aa10.51□□□□□ -0.73
RFC1-213ENST00000512275 LCE2CQ5TA81 110 aa10.51□□□□□ -0.73
RFC1-213ENST00000512275 ZNF295-AS1Q8N0V1 137 aa10.51□□□□□ -0.73
RFC1-213ENST00000512275 ASB16Q96NS5 453 aa10.51□□□□□ -0.73
RFC1-213ENST00000512275 KLF16Q9BXK1 252 aaPredicted RBP10.51□□□□□ -0.73
RFC1-213ENST00000512275 PCGF6Q9BYE7 350 aa10.51□□□□□ -0.73
RFC1-213ENST00000512275 SAP130Q9H0E3 1048 aa10.51□□□□□ -0.73
RFC1-213ENST00000512275 MYOM3Q5VTT5 1437 aa10.5□□□□□ -0.73
RFC1-213ENST00000512275 WDR7Q9Y4E6 1490 aa10.5□□□□□ -0.73
RFC1-213ENST00000512275 CDK2AP1O14519 115 aa10.5□□□□□ -0.73
RFC1-213ENST00000512275 ZNF16P17020 682 aaPredicted RBP10.5□□□□□ -0.73
RFC1-213ENST00000512275 PSMA6P60900 246 aaKnown RBP10.5□□□□□ -0.73
RFC1-213ENST00000512275 CLN3Q13286 438 aa10.5□□□□□ -0.73
RFC1-213ENST00000512275 C16orf46Q6P387 395 aa10.5□□□□□ -0.73
RFC1-213ENST00000512275 Q6ZVU0 165 aa10.5□□□□□ -0.73
RFC1-213ENST00000512275 CNKSR1Q969H4 720 aa10.5□□□□□ -0.73
RFC1-213ENST00000512275 ESYT1Q9BSJ8 1104 aa10.5□□□□□ -0.73
RFC1-213ENST00000512275 PREX2Q70Z35 1606 aa10.5□□□□□ -0.73
RFC1-213ENST00000512275 PTPN23Q9H3S7 1636 aa10.5□□□□□ -0.73
RFC1-213ENST00000512275 CDC42BPBQ9Y5S2 1711 aa10.5□□□□□ -0.73
RFC1-213ENST00000512275 ASXL2Q76L83 1435 aa10.5□□□□□ -0.73
RFC1-213ENST00000512275 RRBP1Q9P2E9 1410 aaKnown RBP10.5□□□□□ -0.73
RFC1-213ENST00000512275 ABCC10Q5T3U5 1492 aa10.49□□□□□ -0.73
RFC1-213ENST00000512275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.49□□□□□ -0.73
RFC1-213ENST00000512275 TNFRSF10BO14763 440 aa10.49□□□□□ -0.73
RFC1-213ENST00000512275 FAM13AO94988 1023 aa10.49□□□□□ -0.73
RFC1-213ENST00000512275 MAPK1P28482 360 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms