RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 SMTNP53814 917 aa7.15□□□□□ -1.26
SMARCAD1-205ENST00000506089 MTFR1Q15390 333 aa7.15□□□□□ -1.26
SMARCAD1-205ENST00000506089 EFHC2Q5JST6 749 aa7.15□□□□□ -1.26
SMARCAD1-205ENST00000506089 TMEM214Q6NUQ4 689 aaKnown RBP7.15□□□□□ -1.26
SMARCAD1-205ENST00000506089 PLVAPQ9BX97 442 aa7.15□□□□□ -1.26
SMARCAD1-205ENST00000506089 GOLGA2P5Q9HBQ8 144 aa7.15□□□□□ -1.26
SMARCAD1-205ENST00000506089 PSME1Q06323 249 aa7.14□□□□□ -1.27
SMARCAD1-205ENST00000506089 CFAP70Q5T0N1 1121 aa7.14□□□□□ -1.27
SMARCAD1-205ENST00000506089 OGFOD1Q8N543 542 aa7.14□□□□□ -1.27
SMARCAD1-205ENST00000506089 A6NJY4 79 aa7.13□□□□□ -1.27
SMARCAD1-205ENST00000506089 EPHA4P54764 986 aa7.13□□□□□ -1.27
SMARCAD1-205ENST00000506089 PRSS36Q5K4E3 855 aa7.13□□□□□ -1.27
SMARCAD1-205ENST00000506089 KANK4Q5T7N3 995 aaPredicted RBP7.13□□□□□ -1.27
SMARCAD1-205ENST00000506089 CCDC102BQ68D86 513 aa7.13□□□□□ -1.27
SMARCAD1-205ENST00000506089 TPCN2Q8NHX9 752 aa7.13□□□□□ -1.27
SMARCAD1-205ENST00000506089 RHBDD1Q8TEB9 315 aa7.13□□□□□ -1.27
SMARCAD1-205ENST00000506089 DNAAF2Q9NVR5 837 aaKnown RBP7.13□□□□□ -1.27
SMARCAD1-205ENST00000506089 KLF15Q9UIH9 416 aa7.13□□□□□ -1.27
SMARCAD1-205ENST00000506089 LMOD1P29536 600 aaPredicted RBP7.12□□□□□ -1.27
SMARCAD1-205ENST00000506089 PLA2G4AP47712 749 aa7.12□□□□□ -1.27
SMARCAD1-205ENST00000506089 GNASQ5JWF2 1037 aa7.12□□□□□ -1.27
SMARCAD1-205ENST00000506089 FCHSD1Q86WN1 690 aa7.12□□□□□ -1.27
SMARCAD1-205ENST00000506089 TRIM50Q86XT4 487 aa7.12□□□□□ -1.27
SMARCAD1-205ENST00000506089 TNS4Q8IZW8 715 aa7.12□□□□□ -1.27
SMARCAD1-205ENST00000506089 ZNF594Q96JF6 807 aaPredicted RBP7.12□□□□□ -1.27
SMARCAD1-205ENST00000506089 ADH6P28332 368 aa7.11□□□□□ -1.27
SMARCAD1-205ENST00000506089 CRTC2Q53ET0 693 aaPredicted RBP7.11□□□□□ -1.27
SMARCAD1-205ENST00000506089 TBCELQ5QJ74 424 aa7.11□□□□□ -1.27
SMARCAD1-205ENST00000506089 HCN2Q9UL51 889 aa7.11□□□□□ -1.27
SMARCAD1-205ENST00000506089 SFI1A8K8P3 1242 aa7.1□□□□□ -1.27
SMARCAD1-205ENST00000506089 CDK2AP1O14519 115 aa7.1□□□□□ -1.27
SMARCAD1-205ENST00000506089 ATP1A2P50993 1020 aa7.1□□□□□ -1.27
SMARCAD1-205ENST00000506089 SIX5Q8N196 739 aa7.1□□□□□ -1.27
SMARCAD1-205ENST00000506089 LARGE2Q8N3Y3 721 aa7.1□□□□□ -1.27
SMARCAD1-205ENST00000506089 ZDHHC1Q8WTX9 485 aa7.1□□□□□ -1.27
SMARCAD1-205ENST00000506089 SCHIP1Q9P0W5 487 aaPredicted RBP7.1□□□□□ -1.27
SMARCAD1-205ENST00000506089 BACH1O14867 736 aa7.09□□□□□ -1.27
SMARCAD1-205ENST00000506089 ATP4AP20648 1035 aa7.09□□□□□ -1.27
SMARCAD1-205ENST00000506089 RASA1P20936 1047 aa7.09□□□□□ -1.27
SMARCAD1-205ENST00000506089 SH3PXD2AQ5TCZ1 1133 aa7.09□□□□□ -1.27
SMARCAD1-205ENST00000506089 CRISPLD1Q9H336 500 aa7.09□□□□□ -1.27
SMARCAD1-205ENST00000506089 PARP3Q9Y6F1 533 aa7.09□□□□□ -1.27
SMARCAD1-205ENST00000506089 GTF2E1P29083 439 aaPredicted RBP7.08□□□□□ -1.28
SMARCAD1-205ENST00000506089 PTK7Q13308 1070 aa7.08□□□□□ -1.28
SMARCAD1-205ENST00000506089 LRP8Q14114 963 aa7.08□□□□□ -1.28
SMARCAD1-205ENST00000506089 CDCA8Q53HL2 280 aa7.08□□□□□ -1.28
SMARCAD1-205ENST00000506089 SLC9A9Q8IVB4 645 aa7.08□□□□□ -1.28
SMARCAD1-205ENST00000506089 TSEN2Q8NCE0 465 aaKnown RBP7.08□□□□□ -1.28
SMARCAD1-205ENST00000506089 NIFKQ9BYG3 293 aaKnown RBP7.08□□□□□ -1.28
SMARCAD1-205ENST00000506089 ZCCHC2Q9C0B9 1178 aaKnown RBP7.08□□□□□ -1.28
SMARCAD1-205ENST00000506089 LGR5O75473 907 aa7.07□□□□□ -1.28
SMARCAD1-205ENST00000506089 CD33P20138 364 aa7.07□□□□□ -1.28
SMARCAD1-205ENST00000506089 RFX1P22670 979 aa7.07□□□□□ -1.28
SMARCAD1-205ENST00000506089 PCBP4P57723 403 aaKnown RBP7.07□□□□□ -1.28
SMARCAD1-205ENST00000506089 TRIM26Q12899 539 aaPredicted RBP7.07□□□□□ -1.28
SMARCAD1-205ENST00000506089 TSPAN10Q9H1Z9 355 aaPredicted RBP7.07□□□□□ -1.28
SMARCAD1-205ENST00000506089 CABP1Q9NZU7 370 aa7.07□□□□□ -1.28
SMARCAD1-205ENST00000506089 PCDHGC4Q9Y5F7 938 aa7.07□□□□□ -1.28
SMARCAD1-205ENST00000506089 DCDC2BA2VCK2 349 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 USP17L15C9J2P7 530 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 USP17L10C9JJH3 530 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 USP17L13C9JLJ4 530 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 USP17L12C9JPN9 530 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 USP17L11C9JVI0 530 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 USP17L21D6R901 530 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 USP17L18D6R9N7 530 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 USP17L22D6RA61 530 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 USP17L17D6RBQ6 530 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 USP17L19D6RCP7 530 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 USP17L20D6RJB6 530 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 FAM229AH3BQW9 127 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 APBA3O96018 575 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 TXLNAP40222 546 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 USP17L24Q0WX57 530 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 DPYDQ12882 1025 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 FIGNL1Q6PIW4 674 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 AIDAQ96BJ3 306 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 VRTNQ9H8Y1 702 aa7.06□□□□□ -1.28
SMARCAD1-205ENST00000506089 FAM196BA6NMK8 535 aa7.05□□□□□ -1.28
SMARCAD1-205ENST00000506089 M0R2N6 131 aa7.05□□□□□ -1.28
SMARCAD1-205ENST00000506089 HYAL3O43820 417 aaPredicted RBP7.05□□□□□ -1.28
SMARCAD1-205ENST00000506089 C21orf2O43822 256 aa7.05□□□□□ -1.28
SMARCAD1-205ENST00000506089 SRPK2P78362 688 aaKnown RBP7.05□□□□□ -1.28
SMARCAD1-205ENST00000506089 PRRT3Q5FWE3 981 aa7.05□□□□□ -1.28
SMARCAD1-205ENST00000506089 GAS2L2Q8NHY3 880 aa7.05□□□□□ -1.28
SMARCAD1-205ENST00000506089 ATXN7O15265 892 aaPredicted RBP7.04□□□□□ -1.28
SMARCAD1-205ENST00000506089 MAPTP10636 758 aaKnown RBP7.04□□□□□ -1.28
SMARCAD1-205ENST00000506089 TEAD4Q15561 434 aa7.04□□□□□ -1.28
SMARCAD1-205ENST00000506089 LARP1Q6PKG0 1096 aaKnown RBP7.04□□□□□ -1.28
SMARCAD1-205ENST00000506089 ANKMY2Q8IV38 441 aa7.04□□□□□ -1.28
SMARCAD1-205ENST00000506089 L3MBTL2Q969R5 705 aa7.04□□□□□ -1.28
SMARCAD1-205ENST00000506089 ARID1BQ8NFD5 2236 aaPredicted RBP7.04□□□□□ -1.28
SMARCAD1-205ENST00000506089 EML1O00423 815 aa7.03□□□□□ -1.28
SMARCAD1-205ENST00000506089 NOS2P35228 1153 aa7.03□□□□□ -1.28
SMARCAD1-205ENST00000506089 SEC13P55735 322 aa7.03□□□□□ -1.28
SMARCAD1-205ENST00000506089 TNP2Q05952 138 aa7.03□□□□□ -1.28
SMARCAD1-205ENST00000506089 FAM182BQ5T319 152 aa7.03□□□□□ -1.28
SMARCAD1-205ENST00000506089 C7orf43Q8WVR3 580 aa7.03□□□□□ -1.28
SMARCAD1-205ENST00000506089 ZIC5Q96T25 663 aa7.03□□□□□ -1.28
SMARCAD1-205ENST00000506089 AVENQ9NQS1 362 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms