RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 PASKQ96RG2 1323 aa8.4□□□□□ -1.06
GYPB-204ENST00000504951 LTBP3Q9NS15 1303 aa8.4□□□□□ -1.06
GYPB-204ENST00000504951 TTLL6Q8N841 843 aa8.4□□□□□ -1.06
GYPB-204ENST00000504951 MYH14Q7Z406 1995 aaKnown RBP8.4□□□□□ -1.06
GYPB-204ENST00000504951 CHRNA5P30532 468 aa8.39□□□□□ -1.07
GYPB-204ENST00000504951 PDAP1Q13442 181 aaKnown RBP8.39□□□□□ -1.07
GYPB-204ENST00000504951 ST20-MTHFSA0A0A6YYL1 179 aa8.38□□□□□ -1.07
GYPB-204ENST00000504951 NFKBIEO00221 500 aa8.38□□□□□ -1.07
GYPB-204ENST00000504951 CRKLP46109 303 aaKnown RBP8.38□□□□□ -1.07
GYPB-204ENST00000504951 AMOTQ4VCS5 1084 aa8.38□□□□□ -1.07
GYPB-204ENST00000504951 CDCA8Q53HL2 280 aa8.38□□□□□ -1.07
GYPB-204ENST00000504951 INTS5Q6P9B9 1019 aaKnown RBP8.38□□□□□ -1.07
GYPB-204ENST00000504951 ABHD8Q96I13 439 aa8.38□□□□□ -1.07
GYPB-204ENST00000504951 NRXN2Q9P2S2 1712 aa8.37□□□□□ -1.07
GYPB-204ENST00000504951 RASSF10A6NK89 507 aa8.37□□□□□ -1.07
GYPB-204ENST00000504951 G3V3G9 751 aa8.37□□□□□ -1.07
GYPB-204ENST00000504951 ITGBL1O95965 494 aaPredicted RBP8.37□□□□□ -1.07
GYPB-204ENST00000504951 MAP2K1Q02750 393 aaPredicted RBP8.37□□□□□ -1.07
GYPB-204ENST00000504951 RASSF7Q02833 373 aa8.37□□□□□ -1.07
GYPB-204ENST00000504951 LDHDQ86WU2 507 aa8.37□□□□□ -1.07
GYPB-204ENST00000504951 AIDAQ96BJ3 306 aa8.37□□□□□ -1.07
GYPB-204ENST00000504951 NARFQ9UHQ1 456 aa8.37□□□□□ -1.07
GYPB-204ENST00000504951 EMILIN1Q9Y6C2 1016 aa8.37□□□□□ -1.07
GYPB-204ENST00000504951 ANKRD26Q9UPS8 1709 aa8.37□□□□□ -1.07
GYPB-204ENST00000504951 ADAMTS7Q9UKP4 1686 aa8.37□□□□□ -1.07
GYPB-204ENST00000504951 IQCA1LA6NCM1 817 aa8.36□□□□□ -1.07
GYPB-204ENST00000504951 TMEM88BA6NKF7 163 aa8.36□□□□□ -1.07
GYPB-204ENST00000504951 H0YIN7 160 aa8.36□□□□□ -1.07
GYPB-204ENST00000504951 ZPR1O75312 459 aa8.36□□□□□ -1.07
GYPB-204ENST00000504951 VEGFBP49765 207 aa8.36□□□□□ -1.07
GYPB-204ENST00000504951 MLLT1Q03111 559 aaPredicted RBP8.36□□□□□ -1.07
GYPB-204ENST00000504951 PLEKHO1Q53GL0 409 aaPredicted RBP8.36□□□□□ -1.07
GYPB-204ENST00000504951 SPOCK2Q92563 424 aa8.36□□□□□ -1.07
GYPB-204ENST00000504951 POLKQ9UBT6 870 aa8.36□□□□□ -1.07
GYPB-204ENST00000504951 SRP68Q9UHB9 627 aaKnown RBP8.36□□□□□ -1.07
GYPB-204ENST00000504951 MKRN1Q9UHC7 482 aaKnown RBP8.36□□□□□ -1.07
GYPB-204ENST00000504951 SOS1Q07889 1333 aaPredicted RBP8.35□□□□□ -1.07
GYPB-204ENST00000504951 DICER1Q9UPY3 1922 aaKnown RBP8.35□□□□□ -1.07
GYPB-204ENST00000504951 CABP4P57796 275 aa8.35□□□□□ -1.07
GYPB-204ENST00000504951 NFIXQ14938 502 aa8.35□□□□□ -1.07
GYPB-204ENST00000504951 ERFEQ4G0M1 354 aa8.35□□□□□ -1.07
GYPB-204ENST00000504951 SOGA3Q5TF21 947 aa8.35□□□□□ -1.07
GYPB-204ENST00000504951 MARVELD3Q96A59 401 aa8.35□□□□□ -1.07
GYPB-204ENST00000504951 CARD14Q9BXL6 1004 aa8.35□□□□□ -1.07
GYPB-204ENST00000504951 DLEC1Q9Y238 1755 aa8.35□□□□□ -1.07
GYPB-204ENST00000504951 VIRMAQ69YN4 1812 aaKnown RBP8.34□□□□□ -1.07
GYPB-204ENST00000504951 SERPINB2P05120 415 aa8.34□□□□□ -1.07
GYPB-204ENST00000504951 HSPA8P11142 646 aaKnown RBP8.34□□□□□ -1.07
GYPB-204ENST00000504951 LBX1P52954 281 aa8.34□□□□□ -1.07
GYPB-204ENST00000504951 EMP3P54852 163 aa8.34□□□□□ -1.07
GYPB-204ENST00000504951 FAM161AQ3B820 660 aa8.34□□□□□ -1.07
GYPB-204ENST00000504951 SPNS2Q8IVW8 549 aa8.34□□□□□ -1.07
GYPB-204ENST00000504951 VSIG10Q8N0Z9 540 aa8.34□□□□□ -1.07
GYPB-204ENST00000504951 BRIP1Q9BX63 1249 aa8.34□□□□□ -1.07
GYPB-204ENST00000504951 BCL2L12Q9HB09 334 aa8.34□□□□□ -1.07
GYPB-204ENST00000504951 SCN4AP35499 1836 aa8.33□□□□□ -1.08
GYPB-204ENST00000504951 CYP19A1P11511 503 aaPredicted RBP8.33□□□□□ -1.08
GYPB-204ENST00000504951 PDE6BP35913 854 aa8.33□□□□□ -1.08
GYPB-204ENST00000504951 MTHFSP49914 203 aa8.33□□□□□ -1.08
GYPB-204ENST00000504951 MMRN1Q13201 1228 aa8.33□□□□□ -1.08
GYPB-204ENST00000504951 EIF4A2Q14240 407 aaKnown RBP8.33□□□□□ -1.08
GYPB-204ENST00000504951 DEFB115Q30KQ5 88 aa8.33□□□□□ -1.08
GYPB-204ENST00000504951 USPL1Q5W0Q7 1092 aa8.33□□□□□ -1.08
GYPB-204ENST00000504951 C2CD5Q86YS7 1000 aa8.33□□□□□ -1.08
GYPB-204ENST00000504951 NFATC2IPQ8NCF5 419 aa8.33□□□□□ -1.08
GYPB-204ENST00000504951 TAF1DQ9H5J8 278 aaPredicted RBP8.33□□□□□ -1.08
GYPB-204ENST00000504951 CIZ1Q9ULV3 898 aaPredicted RBP8.33□□□□□ -1.08
GYPB-204ENST00000504951 FER1L6Q2WGJ9 1857 aa8.32□□□□□ -1.08
GYPB-204ENST00000504951 CCDC88AQ3V6T2 1871 aa8.32□□□□□ -1.08
GYPB-204ENST00000504951 PTCD1O75127 700 aaKnown RBP8.32□□□□□ -1.08
GYPB-204ENST00000504951 PNMA8AQ86V59 439 aaPredicted RBP8.32□□□□□ -1.08
GYPB-204ENST00000504951 CNKSR1Q969H4 720 aa8.32□□□□□ -1.08
GYPB-204ENST00000504951 TIAM2Q8IVF5 1701 aa8.32□□□□□ -1.08
GYPB-204ENST00000504951 WDR33Q9C0J8 1336 aaKnown RBP8.31□□□□□ -1.08
GYPB-204ENST00000504951 AFDNP55196 1824 aaKnown RBP8.31□□□□□ -1.08
GYPB-204ENST00000504951 KIF20BQ96Q89 1820 aa8.31□□□□□ -1.08
GYPB-204ENST00000504951 CA12O43570 354 aa8.31□□□□□ -1.08
GYPB-204ENST00000504951 DDNO94850 711 aaPredicted RBP8.31□□□□□ -1.08
GYPB-204ENST00000504951 STYK1Q6J9G0 422 aa8.31□□□□□ -1.08
GYPB-204ENST00000504951 C7orf43Q8WVR3 580 aa8.31□□□□□ -1.08
GYPB-204ENST00000504951 TAOK3Q9H2K8 898 aa8.31□□□□□ -1.08
GYPB-204ENST00000504951 TJP1Q07157 1748 aa8.3□□□□□ -1.08
GYPB-204ENST00000504951 A0A087WZG4 1122 aa8.3□□□□□ -1.08
GYPB-204ENST00000504951 KLRG2A4D1S0 409 aaPredicted RBP8.3□□□□□ -1.08
GYPB-204ENST00000504951 MAP2K2P36507 400 aa8.3□□□□□ -1.08
GYPB-204ENST00000504951 EIF5P55010 431 aaKnown RBP8.3□□□□□ -1.08
GYPB-204ENST00000504951 ZNF530Q6P9A1 599 aaPredicted RBP8.3□□□□□ -1.08
GYPB-204ENST00000504951 DNAJC10Q8IXB1 793 aa8.3□□□□□ -1.08
GYPB-204ENST00000504951 RGL2O15211 777 aa8.29□□□□□ -1.08
GYPB-204ENST00000504951 PPM1GO15355 546 aaPredicted RBP8.29□□□□□ -1.08
GYPB-204ENST00000504951 C21orf2O43822 256 aa8.29□□□□□ -1.08
GYPB-204ENST00000504951 ECE1P42892 770 aa8.29□□□□□ -1.08
GYPB-204ENST00000504951 C1orf141Q5JVX7 400 aa8.29□□□□□ -1.08
GYPB-204ENST00000504951 CNTROBQ8N137 903 aa8.29□□□□□ -1.08
GYPB-204ENST00000504951 SLC52A2Q9HAB3 445 aa8.29□□□□□ -1.08
GYPB-204ENST00000504951 HACL1Q9UJ83 578 aa8.29□□□□□ -1.08
GYPB-204ENST00000504951 BOLA1Q9Y3E2 137 aa8.29□□□□□ -1.08
GYPB-204ENST00000504951 COL15A1P39059 1388 aa8.29□□□□□ -1.08
GYPB-204ENST00000504951 ADAMTSL1Q8N6G6 1762 aa8.29□□□□□ -1.08
GYPB-204ENST00000504951 FZD9O00144 591 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 533 ms