RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 ECM1Q16610 540 aa8.55□□□□□ -1.04
VPS36-206ENST00000497149 TMCO4Q5TGY1 634 aa8.55□□□□□ -1.04
VPS36-206ENST00000497149 TUT1Q9H6E5 874 aaKnown RBP8.55□□□□□ -1.04
VPS36-206ENST00000497149 KLK14Q9P0G3 267 aa8.55□□□□□ -1.04
VPS36-206ENST00000497149 STIM2Q9P246 746 aa8.55□□□□□ -1.04
VPS36-206ENST00000497149 SENP3-EIF4A1A0A087X0R7 540 aa8.54□□□□□ -1.04
VPS36-206ENST00000497149 INSM1Q01101 510 aaPredicted RBP8.54□□□□□ -1.04
VPS36-206ENST00000497149 DGKZQ13574 1117 aa8.54□□□□□ -1.04
VPS36-206ENST00000497149 GLYCTKQ8IVS8 523 aa8.54□□□□□ -1.04
VPS36-206ENST00000497149 RHPN1Q8TCX5 695 aa8.54□□□□□ -1.04
VPS36-206ENST00000497149 GPC6Q9Y625 555 aaPredicted RBP8.54□□□□□ -1.04
VPS36-206ENST00000497149 FAM13AO94988 1023 aa8.53□□□□□ -1.04
VPS36-206ENST00000497149 F11P03951 625 aa8.53□□□□□ -1.04
VPS36-206ENST00000497149 BRD2P25440 801 aaKnown RBP8.53□□□□□ -1.04
VPS36-206ENST00000497149 PTSQ03393 145 aa8.53□□□□□ -1.04
VPS36-206ENST00000497149 BICDL1Q6ZP65 573 aa8.53□□□□□ -1.04
VPS36-206ENST00000497149 ZIC5Q96T25 663 aa8.53□□□□□ -1.04
VPS36-206ENST00000497149 BIN2Q9UBW5 565 aaPredicted RBP8.53□□□□□ -1.04
VPS36-206ENST00000497149 ARSJQ5FYB0 599 aaPredicted RBP8.52□□□□□ -1.05
VPS36-206ENST00000497149 KLRG1Q96E93 195 aa8.52□□□□□ -1.05
VPS36-206ENST00000497149 IFT43Q96FT9 208 aa8.52□□□□□ -1.05
VPS36-206ENST00000497149 GAS2L1Q99501 681 aaPredicted RBP8.52□□□□□ -1.05
VPS36-206ENST00000497149 NXF1Q9UBU9 619 aaKnown RBP8.52□□□□□ -1.05
VPS36-206ENST00000497149 STK17AQ9UEE5 414 aa8.52□□□□□ -1.05
VPS36-206ENST00000497149 BCS1LQ9Y276 419 aa8.52□□□□□ -1.05
VPS36-206ENST00000497149 SLC35F4A4IF30 521 aa8.51□□□□□ -1.05
VPS36-206ENST00000497149 MPSTP25325 297 aa8.51□□□□□ -1.05
VPS36-206ENST00000497149 ARHGAP4P98171 946 aa8.51□□□□□ -1.05
VPS36-206ENST00000497149 HIF1AQ16665 826 aa8.51□□□□□ -1.05
VPS36-206ENST00000497149 FAM26DQ5JW98 314 aa8.51□□□□□ -1.05
VPS36-206ENST00000497149 SUSD3Q96L08 255 aa8.51□□□□□ -1.05
VPS36-206ENST00000497149 GPAMQ9HCL2 828 aa8.51□□□□□ -1.05
VPS36-206ENST00000497149 ANKIB1Q9P2G1 1089 aa8.51□□□□□ -1.05
VPS36-206ENST00000497149 A0A1W2PNR3 127 aa8.5□□□□□ -1.05
VPS36-206ENST00000497149 ZBTB39O15060 712 aa8.5□□□□□ -1.05
VPS36-206ENST00000497149 CCDC27Q2M243 656 aa8.5□□□□□ -1.05
VPS36-206ENST00000497149 NOM1Q5C9Z4 860 aaKnown RBP8.5□□□□□ -1.05
VPS36-206ENST00000497149 ETFBKMTQ8IXQ9 262 aa8.5□□□□□ -1.05
VPS36-206ENST00000497149 ZNF280CQ8ND82 737 aa8.5□□□□□ -1.05
VPS36-206ENST00000497149 SLC16A10Q8TF71 515 aa8.5□□□□□ -1.05
VPS36-206ENST00000497149 CRISPLD1Q9H336 500 aa8.5□□□□□ -1.05
VPS36-206ENST00000497149 RUBCNLQ9H714 662 aa8.5□□□□□ -1.05
VPS36-206ENST00000497149 NEUROD4Q9HD90 331 aa8.5□□□□□ -1.05
VPS36-206ENST00000497149 CCDC9Q9Y3X0 531 aaKnown RBP8.5□□□□□ -1.05
VPS36-206ENST00000497149 EIF1AXP47813 144 aaKnown RBP8.49□□□□□ -1.05
VPS36-206ENST00000497149 LCE2CQ5TA81 110 aa8.49□□□□□ -1.05
VPS36-206ENST00000497149 LRRC69Q6ZNQ3 347 aa8.49□□□□□ -1.05
VPS36-206ENST00000497149 PGBD3Q8N328 593 aa8.49□□□□□ -1.05
VPS36-206ENST00000497149 ABTB2Q8N961 1025 aa8.49□□□□□ -1.05
VPS36-206ENST00000497149 TGFBR3LH3BV60 316 aa8.48□□□□□ -1.05
VPS36-206ENST00000497149 MFAP1P55081 439 aaKnown RBP8.48□□□□□ -1.05
VPS36-206ENST00000497149 ALKBH2Q6NS38 261 aa8.48□□□□□ -1.05
VPS36-206ENST00000497149 CCDC155Q8N6L0 562 aa8.48□□□□□ -1.05
VPS36-206ENST00000497149 HSH2DQ96JZ2 352 aa8.48□□□□□ -1.05
VPS36-206ENST00000497149 DMGDHQ9UI17 866 aaKnown RBP8.48□□□□□ -1.05
VPS36-206ENST00000497149 H3BM21 787 aa8.47□□□□□ -1.05
VPS36-206ENST00000497149 MICAL2O94851 1124 aa8.47□□□□□ -1.05
VPS36-206ENST00000497149 IER5Q5VY09 327 aa8.47□□□□□ -1.05
VPS36-206ENST00000497149 RIPOR1Q6ZS17 1223 aa8.47□□□□□ -1.05
VPS36-206ENST00000497149 NLRP8Q86W28 1048 aa8.47□□□□□ -1.05
VPS36-206ENST00000497149 TREML1Q86YW5 311 aa8.47□□□□□ -1.05
VPS36-206ENST00000497149 MARSP56192 900 aaKnown RBP8.46□□□□□ -1.06
VPS36-206ENST00000497149 AAMPQ13685 434 aa8.46□□□□□ -1.06
VPS36-206ENST00000497149 ATCAYQ86WG3 371 aa8.46□□□□□ -1.06
VPS36-206ENST00000497149 IRF7Q92985 503 aa8.46□□□□□ -1.06
VPS36-206ENST00000497149 GJA3Q9Y6H8 435 aa8.46□□□□□ -1.06
VPS36-206ENST00000497149 ZAP70P43403 619 aa8.45□□□□□ -1.06
VPS36-206ENST00000497149 LBRQ14739 615 aaKnown RBP8.45□□□□□ -1.06
VPS36-206ENST00000497149 EFHC2Q5JST6 749 aa8.45□□□□□ -1.06
VPS36-206ENST00000497149 BTLAQ7Z6A9 289 aa8.45□□□□□ -1.06
VPS36-206ENST00000497149 H7C1W4 665 aa8.44□□□□□ -1.06
VPS36-206ENST00000497149 OPLAHO14841 1288 aa8.44□□□□□ -1.06
VPS36-206ENST00000497149 FZD6O60353 706 aa8.44□□□□□ -1.06
VPS36-206ENST00000497149 THBS1P07996 1170 aa8.44□□□□□ -1.06
VPS36-206ENST00000497149 DBN1Q16643 649 aa8.44□□□□□ -1.06
VPS36-206ENST00000497149 CCDC87Q9NVE4 849 aa8.44□□□□□ -1.06
VPS36-206ENST00000497149 CUEDC1Q9NWM3 386 aaPredicted RBP8.44□□□□□ -1.06
VPS36-206ENST00000497149 DCTN4Q9UJW0 460 aa8.44□□□□□ -1.06
VPS36-206ENST00000497149 VSIG8P0DPA2 414 aa8.43□□□□□ -1.06
VPS36-206ENST00000497149 ITGA6P23229 1130 aa8.43□□□□□ -1.06
VPS36-206ENST00000497149 INPP5BP32019 993 aa8.43□□□□□ -1.06
VPS36-206ENST00000497149 IDH3AP50213 366 aa8.43□□□□□ -1.06
VPS36-206ENST00000497149 SAMD5Q5TGI4 173 aa8.43□□□□□ -1.06
VPS36-206ENST00000497149 TRIM22Q8IYM9 498 aa8.43□□□□□ -1.06
VPS36-206ENST00000497149 ZCCHC2Q9C0B9 1178 aaKnown RBP8.43□□□□□ -1.06
VPS36-206ENST00000497149 NUCKS1Q9H1E3 243 aaKnown RBP8.43□□□□□ -1.06
VPS36-206ENST00000497149 BRPF3Q9ULD4 1205 aa8.43□□□□□ -1.06
VPS36-206ENST00000497149 MAPK1P28482 360 aa8.42□□□□□ -1.06
VPS36-206ENST00000497149 MZF1P28698 734 aaPredicted RBP8.42□□□□□ -1.06
VPS36-206ENST00000497149 FIGNL1Q6PIW4 674 aa8.42□□□□□ -1.06
VPS36-206ENST00000497149 GMCL1Q96IK5 515 aa8.42□□□□□ -1.06
VPS36-206ENST00000497149 CEP63Q96MT8 703 aa8.42□□□□□ -1.06
VPS36-206ENST00000497149 NDUFB5O43674 189 aa8.41□□□□□ -1.06
VPS36-206ENST00000497149 PPFIA3O75145 1194 aa8.41□□□□□ -1.06
VPS36-206ENST00000497149 DNM1Q05193 864 aaKnown RBP8.41□□□□□ -1.06
VPS36-206ENST00000497149 TYRO3Q06418 890 aa8.41□□□□□ -1.06
VPS36-206ENST00000497149 UBAP2LQ14157 1087 aaKnown RBP8.41□□□□□ -1.06
VPS36-206ENST00000497149 DNAJC14Q6Y2X3 702 aaPredicted RBP8.41□□□□□ -1.06
VPS36-206ENST00000497149 GPR152Q8TDT2 470 aa8.41□□□□□ -1.06
VPS36-206ENST00000497149 EDEM1Q92611 657 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms