RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 MCCP23508 829 aa15.13■□□□□ 0.01
HMGN1-220ENST00000492280 GDPD2Q9HCC8 539 aa15.13■□□□□ 0.01
HMGN1-220ENST00000492280 MST1RQ04912 1400 aa15.13■□□□□ 0.01
HMGN1-220ENST00000492280 NCAPD2Q15021 1401 aa15.13■□□□□ 0.01
HMGN1-220ENST00000492280 ATP5J2-PTCD1G3V325 749 aa15.13■□□□□ 0.01
HMGN1-220ENST00000492280 GOLGA6L22H0YM25 854 aa15.13■□□□□ 0.01
HMGN1-220ENST00000492280 GRM8O00222 908 aa15.13■□□□□ 0.01
HMGN1-220ENST00000492280 PTCD1O75127 700 aaKnown RBP15.13■□□□□ 0.01
HMGN1-220ENST00000492280 EDC3Q96F86 508 aaKnown RBP15.13■□□□□ 0.01
HMGN1-220ENST00000492280 SLC52A2Q9HAB3 445 aa15.13■□□□□ 0.01
HMGN1-220ENST00000492280 ANO8Q9HCE9 1232 aaPredicted RBP15.13■□□□□ 0.01
HMGN1-220ENST00000492280 SIPA1L3O60292 1781 aaPredicted RBP15.12■□□□□ 0.01
HMGN1-220ENST00000492280 TATP17735 454 aaPredicted RBP15.12■□□□□ 0.01
HMGN1-220ENST00000492280 SGSM2O43147 1006 aa15.12■□□□□ 0.01
HMGN1-220ENST00000492280 PTH1RQ03431 593 aa15.12■□□□□ 0.01
HMGN1-220ENST00000492280 CLASRPQ8N2M8 674 aaKnown RBP15.12■□□□□ 0.01
HMGN1-220ENST00000492280 DDX21Q9NR30 783 aaKnown RBP eCLIP15.12■□□□□ 0.01
HMGN1-220ENST00000492280 LMBRD1Q9NUN5 540 aa15.12■□□□□ 0.01
HMGN1-220ENST00000492280 HEG1Q9ULI3 1381 aa15.12■□□□□ 0.01
HMGN1-220ENST00000492280 SASH1O94885 1247 aa15.11■□□□□ 0.01
HMGN1-220ENST00000492280 CHGBP05060 677 aa15.11■□□□□ 0.01
HMGN1-220ENST00000492280 NUCB2P80303 420 aa15.11■□□□□ 0.01
HMGN1-220ENST00000492280 CNTROBQ8N137 903 aa15.11■□□□□ 0.01
HMGN1-220ENST00000492280 EAF2Q96CJ1 260 aaPredicted RBP15.11■□□□□ 0.01
HMGN1-220ENST00000492280 ALS2Q96Q42 1657 aa15.11■□□□□ 0.01
HMGN1-220ENST00000492280 IFIT2P09913 472 aaKnown RBP15.11■□□□□ 0.01
HMGN1-220ENST00000492280 TCHHQ07283 1943 aa15.11■□□□□ 0.01
HMGN1-220ENST00000492280 MRE11P49959 708 aa15.1■□□□□ 0.01
HMGN1-220ENST00000492280 GPT2Q8TD30 523 aa15.1■□□□□ 0.01
HMGN1-220ENST00000492280 HYPKQ9NX55 129 aa15.1■□□□□ 0.01
HMGN1-220ENST00000492280 SNX14Q9Y5W7 946 aa15.1■□□□□ 0.01
HMGN1-220ENST00000492280 LINS1Q8NG48 757 aa15.1■□□□□ 0.01
HMGN1-220ENST00000492280 FAM227BQ96M60 508 aa15.1■□□□□ 0.01
HMGN1-220ENST00000492280 LSG1Q9H089 658 aaKnown RBP15.1■□□□□ 0.01
HMGN1-220ENST00000492280 BOLA2Q9H3K6 86 aa15.1■□□□□ 0.01
HMGN1-220ENST00000492280 DIAPH3Q9NSV4 1193 aa15.1■□□□□ 0.01
HMGN1-220ENST00000492280 RAD50Q92878 1312 aa15.1■□□□□ 0.01
HMGN1-220ENST00000492280 HSPA4P34932 840 aa15.09■□□□□ 0.01
HMGN1-220ENST00000492280 KAT6BQ8WYB5 2073 aa15.09■□□□□ 0.01
HMGN1-220ENST00000492280 CAMTA1Q9Y6Y1 1673 aa15.09■□□□□ 0.01
HMGN1-220ENST00000492280 LARGE1O95461 756 aa15.09■□□□□ 0.01
HMGN1-220ENST00000492280 ADCK5Q3MIX3 580 aa15.09■□□□□ 0.01
HMGN1-220ENST00000492280 ALDH1L1O75891 902 aa15.08■□□□□ 0.01
HMGN1-220ENST00000492280 PRPF40BQ6NWY9 871 aaKnown RBP15.08■□□□□ 0.01
HMGN1-220ENST00000492280 TTC5Q8N0Z6 440 aa15.08■□□□□ 0.01
HMGN1-220ENST00000492280 TCEANC2Q96MN5 208 aa15.08■□□□□ 0.01
HMGN1-220ENST00000492280 SCN11AQ9UI33 1791 aa15.08■□□□□ 0
HMGN1-220ENST00000492280 NEURL1BA8MQ27 555 aa15.08■□□□□ 0
HMGN1-220ENST00000492280 EIF5BO60841 1220 aaKnown RBP15.08■□□□□ 0
HMGN1-220ENST00000492280 KLHL40Q2TBA0 621 aa15.08■□□□□ 0
HMGN1-220ENST00000492280 UBE3BQ7Z3V4 1068 aa15.08■□□□□ 0
HMGN1-220ENST00000492280 AOX1Q06278 1338 aa15.08■□□□□ 0
HMGN1-220ENST00000492280 ECHDC1Q9NTX5 307 aa15.08■□□□□ 0
HMGN1-220ENST00000492280 GLRX3O76003 335 aaKnown RBP15.07■□□□□ 0
HMGN1-220ENST00000492280 DDX58O95786 925 aaKnown RBP15.07■□□□□ 0
HMGN1-220ENST00000492280 CASTP20810 708 aaKnown RBP15.07■□□□□ 0
HMGN1-220ENST00000492280 AK2P54819 239 aa15.07■□□□□ 0
HMGN1-220ENST00000492280 MTX1Q13505 466 aa15.07■□□□□ 0
HMGN1-220ENST00000492280 IFNL2Q8IZJ0 200 aa15.07■□□□□ 0
HMGN1-220ENST00000492280 TAF6LQ9Y6J9 622 aa15.07■□□□□ 0
HMGN1-220ENST00000492280 KIF1AQ12756 1690 aa15.07■□□□□ 0
HMGN1-220ENST00000492280 G3BP1Q13283 466 aaKnown RBP eCLIP15.07■□□□□ 0
HMGN1-220ENST00000492280 SKOR2Q2VWA4 1001 aaPredicted RBP15.07■□□□□ 0
HMGN1-220ENST00000492280 CWC22Q9HCG8 908 aaKnown RBP15.07■□□□□ 0
HMGN1-220ENST00000492280 ZSCAN23Q3MJ62 389 aa15.06■□□□□ 0
HMGN1-220ENST00000492280 KIAA1211Q6ZU35 1233 aa15.06■□□□□ 0
HMGN1-220ENST00000492280 ZNF330Q9Y3S2 320 aaPredicted RBP15.06■□□□□ 0
HMGN1-220ENST00000492280 ERBB4Q15303 1308 aa15.06■□□□□ 0
HMGN1-220ENST00000492280 GCKRQ14397 625 aa15.06■□□□□ 0
HMGN1-220ENST00000492280 HSP90AB4PQ58FF6 505 aa15.06■□□□□ 0
HMGN1-220ENST00000492280 CLEC17AQ6ZS10 378 aa15.06■□□□□ 0
HMGN1-220ENST00000492280 FAM43AQ8N2R8 423 aa15.06■□□□□ 0
HMGN1-220ENST00000492280 CHMP3Q9Y3E7 222 aa15.06■□□□□ 0
HMGN1-220ENST00000492280 TMEM63CQ9P1W3 806 aa15.05■□□□□ 0
HMGN1-220ENST00000492280 A0A0D9SFI3 127 aa15.05■□□□□ -0
HMGN1-220ENST00000492280 CABP4P57796 275 aa15.05■□□□□ -0
HMGN1-220ENST00000492280 ANAPC15P60006 121 aa15.05■□□□□ -0
HMGN1-220ENST00000492280 NEXNQ0ZGT2 675 aa15.05■□□□□ -0
HMGN1-220ENST00000492280 NMIQ13287 307 aaPredicted RBP15.05■□□□□ -0
HMGN1-220ENST00000492280 CUL4AQ13619 759 aa15.05■□□□□ -0
HMGN1-220ENST00000492280 RUFY3Q7L099 469 aa15.05■□□□□ -0
HMGN1-220ENST00000492280 COL18A1P39060 1754 aa15.04■□□□□ -0
HMGN1-220ENST00000492280 ANKRD13DQ6ZTN6 518 aa15.04■□□□□ -0
HMGN1-220ENST00000492280 JAKMIP1Q96N16 626 aaKnown RBP15.04■□□□□ -0
HMGN1-220ENST00000492280 STRN4Q9NRL3 753 aa15.04■□□□□ -0
HMGN1-220ENST00000492280 LARP1Q6PKG0 1096 aaKnown RBP15.04■□□□□ -0
HMGN1-220ENST00000492280 CADPS2Q86UW7 1296 aa15.04■□□□□ -0
HMGN1-220ENST00000492280 PRDM11Q9NQV5 511 aa15.04■□□□□ -0
HMGN1-220ENST00000492280 TNS3Q68CZ2 1445 aa15.04■□□□□ -0
HMGN1-220ENST00000492280 OVOS2A0A0G2JMS6 1433 aa15.03■□□□□ -0
HMGN1-220ENST00000492280 SYCE3A1L190 88 aa15.03■□□□□ -0
HMGN1-220ENST00000492280 GADD45BO75293 160 aaPredicted RBP15.03■□□□□ -0
HMGN1-220ENST00000492280 BRD1O95696 1058 aa15.03■□□□□ -0
HMGN1-220ENST00000492280 SLFNL1Q499Z3 407 aa15.03■□□□□ -0
HMGN1-220ENST00000492280 TTC41PQ6P2S7 1318 aa15.03■□□□□ -0
HMGN1-220ENST00000492280 TOM1L2Q6ZVM7 507 aa15.03■□□□□ -0
HMGN1-220ENST00000492280 LRP10Q7Z4F1 713 aa15.03■□□□□ -0
HMGN1-220ENST00000492280 FSD1Q9BTV5 496 aa15.03■□□□□ -0
HMGN1-220ENST00000492280 CRYBG1Q9Y4K1 1723 aa15.03■□□□□ -0
HMGN1-220ENST00000492280 KCNJ4P48050 445 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms