RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 DGKZQ13574 1117 aa7.02□□□□□ -1.29
CD46-216ENST00000490278 MTMR3Q13615 1198 aa7.02□□□□□ -1.29
CD46-216ENST00000490278 C11orf91Q3C1V1 193 aa7.02□□□□□ -1.29
CD46-216ENST00000490278 BICDL1Q6ZP65 573 aa7.02□□□□□ -1.29
CD46-216ENST00000490278 GLYCTKQ8IVS8 523 aa7.02□□□□□ -1.29
CD46-216ENST00000490278 GPC6Q9Y625 555 aaPredicted RBP7.02□□□□□ -1.29
CD46-216ENST00000490278 SENP3-EIF4A1A0A087X0R7 540 aa7.01□□□□□ -1.29
CD46-216ENST00000490278 TNFRSF10BO14763 440 aa7.01□□□□□ -1.29
CD46-216ENST00000490278 F11P03951 625 aa7.01□□□□□ -1.29
CD46-216ENST00000490278 BRD2P25440 801 aaKnown RBP7.01□□□□□ -1.29
CD46-216ENST00000490278 PTSQ03393 145 aa7.01□□□□□ -1.29
CD46-216ENST00000490278 HIF1AQ16665 826 aa7.01□□□□□ -1.29
CD46-216ENST00000490278 ARSJQ5FYB0 599 aaPredicted RBP7.01□□□□□ -1.29
CD46-216ENST00000490278 TMCO4Q5TGY1 634 aa7.01□□□□□ -1.29
CD46-216ENST00000490278 C7orf43Q8WVR3 580 aa7.01□□□□□ -1.29
CD46-216ENST00000490278 GAS2L1Q99501 681 aaPredicted RBP7.01□□□□□ -1.29
CD46-216ENST00000490278 STIM2Q9P246 746 aa7.01□□□□□ -1.29
CD46-216ENST00000490278 FAM13AO94988 1023 aa7□□□□□ -1.29
CD46-216ENST00000490278 SNRPBP14678 240 aaKnown RBP7□□□□□ -1.29
CD46-216ENST00000490278 PGBD3Q8N328 593 aa7□□□□□ -1.29
CD46-216ENST00000490278 GPAMQ9HCL2 828 aa7□□□□□ -1.29
CD46-216ENST00000490278 KLK14Q9P0G3 267 aa7□□□□□ -1.29
CD46-216ENST00000490278 BIN2Q9UBW5 565 aaPredicted RBP7□□□□□ -1.29
CD46-216ENST00000490278 SLC35F4A4IF30 521 aa6.99□□□□□ -1.29
CD46-216ENST00000490278 NPR3P17342 541 aa6.99□□□□□ -1.29
CD46-216ENST00000490278 ABTB2Q8N961 1025 aa6.99□□□□□ -1.29
CD46-216ENST00000490278 SUSD3Q96L08 255 aa6.99□□□□□ -1.29
CD46-216ENST00000490278 ZIC5Q96T25 663 aa6.99□□□□□ -1.29
CD46-216ENST00000490278 CRISPLD1Q9H336 500 aa6.99□□□□□ -1.29
CD46-216ENST00000490278 NEUROD4Q9HD90 331 aa6.99□□□□□ -1.29
CD46-216ENST00000490278 ANKIB1Q9P2G1 1089 aa6.99□□□□□ -1.29
CD46-216ENST00000490278 A0A1W2PNR3 127 aa6.98□□□□□ -1.29
CD46-216ENST00000490278 MPSTP25325 297 aa6.98□□□□□ -1.29
CD46-216ENST00000490278 CCDC155Q8N6L0 562 aa6.98□□□□□ -1.29
CD46-216ENST00000490278 IFT43Q96FT9 208 aa6.98□□□□□ -1.29
CD46-216ENST00000490278 RUBCNLQ9H714 662 aa6.98□□□□□ -1.29
CD46-216ENST00000490278 TGFBR3LH3BV60 316 aa6.97□□□□□ -1.29
CD46-216ENST00000490278 ECM1Q16610 540 aa6.97□□□□□ -1.29
CD46-216ENST00000490278 CCDC27Q2M243 656 aa6.97□□□□□ -1.29
CD46-216ENST00000490278 NOM1Q5C9Z4 860 aaKnown RBP6.97□□□□□ -1.29
CD46-216ENST00000490278 IER5Q5VY09 327 aa6.97□□□□□ -1.29
CD46-216ENST00000490278 ALKBH2Q6NS38 261 aa6.97□□□□□ -1.29
CD46-216ENST00000490278 LRRC69Q6ZNQ3 347 aa6.97□□□□□ -1.29
CD46-216ENST00000490278 RIPOR1Q6ZS17 1223 aa6.97□□□□□ -1.29
CD46-216ENST00000490278 ETFBKMTQ8IXQ9 262 aa6.97□□□□□ -1.29
CD46-216ENST00000490278 ZNF280CQ8ND82 737 aa6.97□□□□□ -1.29
CD46-216ENST00000490278 KLRG1Q96E93 195 aa6.97□□□□□ -1.29
CD46-216ENST00000490278 HSH2DQ96JZ2 352 aa6.97□□□□□ -1.29
CD46-216ENST00000490278 BCS1LQ9Y276 419 aa6.97□□□□□ -1.29
CD46-216ENST00000490278 GJA3Q9Y6H8 435 aa6.97□□□□□ -1.29
CD46-216ENST00000490278 ZBTB39O15060 712 aa6.96□□□□□ -1.3
CD46-216ENST00000490278 LORP23490 312 aaPredicted RBP6.96□□□□□ -1.3
CD46-216ENST00000490278 EIF1AXP47813 144 aaKnown RBP6.96□□□□□ -1.3
CD46-216ENST00000490278 ARHGAP4P98171 946 aa6.96□□□□□ -1.3
CD46-216ENST00000490278 LBRQ14739 615 aaKnown RBP6.96□□□□□ -1.3
CD46-216ENST00000490278 EFHC2Q5JST6 749 aa6.96□□□□□ -1.3
CD46-216ENST00000490278 FAM26DQ5JW98 314 aa6.96□□□□□ -1.3
CD46-216ENST00000490278 NLRP8Q86W28 1048 aa6.96□□□□□ -1.3
CD46-216ENST00000490278 TREML1Q86YW5 311 aa6.96□□□□□ -1.3
CD46-216ENST00000490278 CCDC9Q9Y3X0 531 aaKnown RBP6.96□□□□□ -1.3
CD46-216ENST00000490278 FAM181BA6NEQ2 426 aa6.95□□□□□ -1.3
CD46-216ENST00000490278 H7C1W4 665 aa6.95□□□□□ -1.3
CD46-216ENST00000490278 MICAL2O94851 1124 aa6.95□□□□□ -1.3
CD46-216ENST00000490278 MFAP1P55081 439 aaKnown RBP6.95□□□□□ -1.3
CD46-216ENST00000490278 AAMPQ13685 434 aa6.95□□□□□ -1.3
CD46-216ENST00000490278 NUCKS1Q9H1E3 243 aaKnown RBP6.95□□□□□ -1.3
CD46-216ENST00000490278 ITGA6P23229 1130 aa6.94□□□□□ -1.3
CD46-216ENST00000490278 ZAP70P43403 619 aa6.94□□□□□ -1.3
CD46-216ENST00000490278 BTLAQ7Z6A9 289 aa6.94□□□□□ -1.3
CD46-216ENST00000490278 DMGDHQ9UI17 866 aaKnown RBP6.94□□□□□ -1.3
CD46-216ENST00000490278 IDH3AP50213 366 aa6.93□□□□□ -1.3
CD46-216ENST00000490278 MARSP56192 900 aaKnown RBP6.93□□□□□ -1.3
CD46-216ENST00000490278 DBN1Q16643 649 aa6.93□□□□□ -1.3
CD46-216ENST00000490278 SAMD5Q5TGI4 173 aa6.93□□□□□ -1.3
CD46-216ENST00000490278 FIGNL1Q6PIW4 674 aa6.93□□□□□ -1.3
CD46-216ENST00000490278 TRIM22Q8IYM9 498 aa6.93□□□□□ -1.3
CD46-216ENST00000490278 GMCL1Q96IK5 515 aa6.93□□□□□ -1.3
CD46-216ENST00000490278 FAM13BQ9NYF5 915 aa6.93□□□□□ -1.3
CD46-216ENST00000490278 DCTN4Q9UJW0 460 aa6.93□□□□□ -1.3
CD46-216ENST00000490278 NDUFB5O43674 189 aa6.92□□□□□ -1.3
CD46-216ENST00000490278 FZD6O60353 706 aa6.92□□□□□ -1.3
CD46-216ENST00000490278 PPFIA3O75145 1194 aa6.92□□□□□ -1.3
CD46-216ENST00000490278 THBS1P07996 1170 aa6.92□□□□□ -1.3
CD46-216ENST00000490278 ARSDP51689 593 aa6.92□□□□□ -1.3
CD46-216ENST00000490278 ATCAYQ86WG3 371 aa6.92□□□□□ -1.3
CD46-216ENST00000490278 CEP63Q96MT8 703 aa6.92□□□□□ -1.3
CD46-216ENST00000490278 ZCCHC2Q9C0B9 1178 aaKnown RBP6.92□□□□□ -1.3
CD46-216ENST00000490278 CUEDC1Q9NWM3 386 aaPredicted RBP6.92□□□□□ -1.3
CD46-216ENST00000490278 BRPF3Q9ULD4 1205 aa6.92□□□□□ -1.3
CD46-216ENST00000490278 OPLAHO14841 1288 aa6.91□□□□□ -1.3
CD46-216ENST00000490278 ATXN7O15265 892 aaPredicted RBP6.91□□□□□ -1.3
CD46-216ENST00000490278 MAPK1P28482 360 aa6.91□□□□□ -1.3
CD46-216ENST00000490278 MZF1P28698 734 aaPredicted RBP6.91□□□□□ -1.3
CD46-216ENST00000490278 INPP5BP32019 993 aa6.91□□□□□ -1.3
CD46-216ENST00000490278 TYRO3Q06418 890 aa6.91□□□□□ -1.3
CD46-216ENST00000490278 ZSCAN1Q8NBB4 408 aa6.91□□□□□ -1.3
CD46-216ENST00000490278 EDEM1Q92611 657 aa6.91□□□□□ -1.3
CD46-216ENST00000490278 ZNF837Q96EG3 531 aaPredicted RBP6.91□□□□□ -1.3
CD46-216ENST00000490278 CCDC87Q9NVE4 849 aa6.91□□□□□ -1.3
CD46-216ENST00000490278 PCDHGC4Q9Y5F7 938 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms