RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 MYL6BP14649 208 aa8.8□□□□□ -1
SF3A3-206ENST00000487062 HSPA1LP34931 641 aa8.8□□□□□ -1
SF3A3-206ENST00000487062 NEXNQ0ZGT2 675 aa8.8□□□□□ -1
SF3A3-206ENST00000487062 AIMP1Q12904 312 aaKnown RBP8.8□□□□□ -1
SF3A3-206ENST00000487062 PDIA6Q15084 440 aa8.8□□□□□ -1
SF3A3-206ENST00000487062 PROSER3Q2NL68 480 aa8.8□□□□□ -1
SF3A3-206ENST00000487062 BEND3Q5T5X7 828 aa8.8□□□□□ -1
SF3A3-206ENST00000487062 CEP85Q6P2H3 762 aa8.8□□□□□ -1
SF3A3-206ENST00000487062 RIC3Q7Z5B4 369 aa8.8□□□□□ -1
SF3A3-206ENST00000487062 USP21Q9UK80 565 aa8.8□□□□□ -1
SF3A3-206ENST00000487062 MAP3K2Q9Y2U5 619 aa8.8□□□□□ -1
SF3A3-206ENST00000487062 ADCY9O60503 1353 aa8.8□□□□□ -1
SF3A3-206ENST00000487062 BCL9LQ86UU0 1499 aa8.8□□□□□ -1
SF3A3-206ENST00000487062 ARFGEF2Q9Y6D5 1785 aa8.8□□□□□ -1
SF3A3-206ENST00000487062 IBTKQ9P2D0 1353 aaPredicted RBP8.79□□□□□ -1
SF3A3-206ENST00000487062 PTCD1O75127 700 aaKnown RBP8.79□□□□□ -1
SF3A3-206ENST00000487062 NUCB1Q02818 461 aa8.79□□□□□ -1
SF3A3-206ENST00000487062 COPS6Q7L5N1 327 aa8.79□□□□□ -1
SF3A3-206ENST00000487062 LINS1Q8NG48 757 aa8.79□□□□□ -1
SF3A3-206ENST00000487062 XAGE3Q8WTP9 111 aa8.79□□□□□ -1
SF3A3-206ENST00000487062 PIGBQ92521 554 aa8.79□□□□□ -1
SF3A3-206ENST00000487062 SYTL4Q96C24 671 aaPredicted RBP8.79□□□□□ -1
SF3A3-206ENST00000487062 RBM19Q9Y4C8 960 aaKnown RBP8.79□□□□□ -1
SF3A3-206ENST00000487062 STARD3NLO95772 234 aa8.78□□□□□ -1
SF3A3-206ENST00000487062 PDE4AP27815 886 aa8.78□□□□□ -1
SF3A3-206ENST00000487062 NUBP1P53384 320 aa8.78□□□□□ -1
SF3A3-206ENST00000487062 FAM161AQ3B820 660 aa8.78□□□□□ -1
SF3A3-206ENST00000487062 ANKRD45Q5TZF3 282 aa8.78□□□□□ -1
SF3A3-206ENST00000487062 ANKRD13DQ6ZTN6 518 aa8.78□□□□□ -1
SF3A3-206ENST00000487062 CHD1LQ86WJ1 897 aa8.78□□□□□ -1
SF3A3-206ENST00000487062 SIRT2Q8IXJ6 389 aa8.78□□□□□ -1
SF3A3-206ENST00000487062 RBM42Q9BTD8 480 aaKnown RBP8.78□□□□□ -1
SF3A3-206ENST00000487062 USP44Q9H0E7 712 aa8.78□□□□□ -1
SF3A3-206ENST00000487062 DCTPP1Q9H773 170 aa8.78□□□□□ -1
SF3A3-206ENST00000487062 ATG3Q9NT62 314 aa8.78□□□□□ -1
SF3A3-206ENST00000487062 C9orf78Q9NZ63 289 aaPredicted RBP8.78□□□□□ -1
SF3A3-206ENST00000487062 NUP188Q5SRE5 1749 aa8.77□□□□□ -1
SF3A3-206ENST00000487062 A0A0G2JS52 829 aa8.77□□□□□ -1.01
SF3A3-206ENST00000487062 PRIM1P49642 420 aaKnown RBP8.77□□□□□ -1.01
SF3A3-206ENST00000487062 ATP8B2P98198 1209 aa8.77□□□□□ -1.01
SF3A3-206ENST00000487062 FAM98CQ17RN3 349 aaKnown RBP8.77□□□□□ -1.01
SF3A3-206ENST00000487062 SKAP1Q86WV1 359 aa8.77□□□□□ -1.01
SF3A3-206ENST00000487062 MARCH10Q8NA82 808 aaPredicted RBP8.77□□□□□ -1.01
SF3A3-206ENST00000487062 PLBD2Q8NHP8 589 aa8.77□□□□□ -1.01
SF3A3-206ENST00000487062 METTL22Q9BUU2 404 aaPredicted RBP8.77□□□□□ -1.01
SF3A3-206ENST00000487062 BACH2Q9BYV9 841 aa8.77□□□□□ -1.01
SF3A3-206ENST00000487062 ASAP1Q9ULH1 1129 aa8.77□□□□□ -1.01
SF3A3-206ENST00000487062 LRRFIP2Q9Y608 721 aaKnown RBP8.77□□□□□ -1.01
SF3A3-206ENST00000487062 THSD7AQ9UPZ6 1657 aa8.77□□□□□ -1.01
SF3A3-206ENST00000487062 DSG3P32926 999 aa8.76□□□□□ -1.01
SF3A3-206ENST00000487062 LRP10Q7Z4F1 713 aa8.76□□□□□ -1.01
SF3A3-206ENST00000487062 SMARCC1Q92922 1105 aaPredicted RBP8.76□□□□□ -1.01
SF3A3-206ENST00000487062 MYD88Q99836 296 aa8.76□□□□□ -1.01
SF3A3-206ENST00000487062 TJP1Q07157 1748 aa8.76□□□□□ -1.01
SF3A3-206ENST00000487062 AFF2P51816 1311 aa8.76□□□□□ -1.01
SF3A3-206ENST00000487062 CICQ96RK0 1608 aaPredicted RBP8.76□□□□□ -1.01
SF3A3-206ENST00000487062 NBPF26B4DH59 902 aa8.75□□□□□ -1.01
SF3A3-206ENST00000487062 GRM8O00222 908 aa8.75□□□□□ -1.01
SF3A3-206ENST00000487062 A1BGP04217 495 aa8.75□□□□□ -1.01
SF3A3-206ENST00000487062 CWF19L2Q2TBE0 894 aaKnown RBP8.75□□□□□ -1.01
SF3A3-206ENST00000487062 NBPF14Q5TI25 921 aa8.75□□□□□ -1.01
SF3A3-206ENST00000487062 NBPF10Q6P3W6 841 aaKnown RBP8.75□□□□□ -1.01
SF3A3-206ENST00000487062 NPM2Q86SE8 214 aaKnown RBP8.75□□□□□ -1.01
SF3A3-206ENST00000487062 DNAJC10Q8IXB1 793 aa8.75□□□□□ -1.01
SF3A3-206ENST00000487062 NBPF15Q8N660 670 aa8.75□□□□□ -1.01
SF3A3-206ENST00000487062 LNPKQ9C0E8 428 aa8.75□□□□□ -1.01
SF3A3-206ENST00000487062 TRPC5Q9UL62 973 aaPredicted RBP8.75□□□□□ -1.01
SF3A3-206ENST00000487062 UTYO14607 1347 aa8.75□□□□□ -1.01
SF3A3-206ENST00000487062 ZNF831Q5JPB2 1677 aa8.75□□□□□ -1.01
SF3A3-206ENST00000487062 ATRNO75882 1429 aa8.74□□□□□ -1.01
SF3A3-206ENST00000487062 NEURL1BA8MQ27 555 aa8.74□□□□□ -1.01
SF3A3-206ENST00000487062 NBPF7P0C2Y1 421 aaPredicted RBP8.74□□□□□ -1.01
SF3A3-206ENST00000487062 PIP4K2AP48426 406 aaPredicted RBP8.74□□□□□ -1.01
SF3A3-206ENST00000487062 HSP90AB4PQ58FF6 505 aa8.74□□□□□ -1.01
SF3A3-206ENST00000487062 KIF6Q6ZMV9 814 aa8.74□□□□□ -1.01
SF3A3-206ENST00000487062 HOMEZQ8IX15 550 aa8.74□□□□□ -1.01
SF3A3-206ENST00000487062 SSH3Q8TE77 659 aa8.74□□□□□ -1.01
SF3A3-206ENST00000487062 ACSBG1Q96GR2 724 aa8.74□□□□□ -1.01
SF3A3-206ENST00000487062 GJD4Q96KN9 370 aaPredicted RBP8.74□□□□□ -1.01
SF3A3-206ENST00000487062 ANKRD36CQ5JPF3 1778 aa8.73□□□□□ -1.01
SF3A3-206ENST00000487062 NHSQ6T4R5 1651 aa8.73□□□□□ -1.01
SF3A3-206ENST00000487062 RAB11FIP3O75154 756 aa8.73□□□□□ -1.01
SF3A3-206ENST00000487062 IGKV5-2P06315 115 aa8.73□□□□□ -1.01
SF3A3-206ENST00000487062 MTX1Q13505 466 aa8.73□□□□□ -1.01
SF3A3-206ENST00000487062 GCKRQ14397 625 aa8.73□□□□□ -1.01
SF3A3-206ENST00000487062 C8orf34Q49A92 452 aa8.73□□□□□ -1.01
SF3A3-206ENST00000487062 PPP1R42Q7Z4L9 355 aa8.73□□□□□ -1.01
SF3A3-206ENST00000487062 SGIP1Q9BQI5 828 aa8.73□□□□□ -1.01
SF3A3-206ENST00000487062 RREB1Q92766 1687 aa8.72□□□□□ -1.01
SF3A3-206ENST00000487062 PNMA6EA0A0J9YXQ4 647 aa8.72□□□□□ -1.01
SF3A3-206ENST00000487062 STK25O00506 426 aa8.72□□□□□ -1.01
SF3A3-206ENST00000487062 SRGAP3O43295 1099 aa8.72□□□□□ -1.01
SF3A3-206ENST00000487062 CYP19A1P11511 503 aaPredicted RBP8.72□□□□□ -1.01
SF3A3-206ENST00000487062 ANP32AP39687 249 aaKnown RBP8.72□□□□□ -1.01
SF3A3-206ENST00000487062 HSP90AB3PQ58FF7 597 aa8.72□□□□□ -1.01
SF3A3-206ENST00000487062 TTLL7Q6ZT98 887 aa8.72□□□□□ -1.01
SF3A3-206ENST00000487062 LRRCC1Q9C099 1032 aa8.72□□□□□ -1.01
SF3A3-206ENST00000487062 BTAF1O14981 1849 aa8.72□□□□□ -1.01
SF3A3-206ENST00000487062 SBF2Q86WG5 1849 aa8.72□□□□□ -1.01
SF3A3-206ENST00000487062 COL15A1P39059 1388 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms