RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 TINF2Q9BSI4 451 aa7.98□□□□□ -1.13
COPA-203ENST00000481040 OSBPL3Q9H4L5 887 aa7.98□□□□□ -1.13
COPA-203ENST00000481040 VTI1BQ9UEU0 232 aa7.98□□□□□ -1.13
COPA-203ENST00000481040 WWC3Q9ULE0 1092 aa7.98□□□□□ -1.13
COPA-203ENST00000481040 H3BM21 787 aa7.97□□□□□ -1.13
COPA-203ENST00000481040 GPR182O15218 404 aa7.97□□□□□ -1.13
COPA-203ENST00000481040 PPM1GO15355 546 aaPredicted RBP7.97□□□□□ -1.13
COPA-203ENST00000481040 GMPRP36959 345 aa7.97□□□□□ -1.13
COPA-203ENST00000481040 DPH6Q7L8W6 267 aa7.97□□□□□ -1.13
COPA-203ENST00000481040 SLC43A3Q8NBI5 491 aa7.97□□□□□ -1.13
COPA-203ENST00000481040 ALKBH8Q96BT7 664 aaKnown RBP7.97□□□□□ -1.13
COPA-203ENST00000481040 TGIF2Q9GZN2 237 aa7.97□□□□□ -1.13
COPA-203ENST00000481040 C6orf118Q5T5N4 469 aa7.96□□□□□ -1.14
COPA-203ENST00000481040 VASH1Q7L8A9 365 aaPredicted RBP7.96□□□□□ -1.14
COPA-203ENST00000481040 STAG2Q8N3U4 1231 aa7.96□□□□□ -1.14
COPA-203ENST00000481040 SLC4A9Q96Q91 983 aa7.96□□□□□ -1.14
COPA-203ENST00000481040 C2orf49Q9BVC5 232 aaPredicted RBP7.96□□□□□ -1.14
COPA-203ENST00000481040 CCSER2Q9H7U1 834 aa7.96□□□□□ -1.14
COPA-203ENST00000481040 MAP4K5Q9Y4K4 846 aa7.96□□□□□ -1.14
COPA-203ENST00000481040 ZNF76P36508 570 aa7.95□□□□□ -1.14
COPA-203ENST00000481040 FOXK2Q01167 660 aa7.95□□□□□ -1.14
COPA-203ENST00000481040 TBCELQ5QJ74 424 aa7.95□□□□□ -1.14
COPA-203ENST00000481040 MEIOBQ8N635 442 aa7.95□□□□□ -1.14
COPA-203ENST00000481040 ABTB2Q8N961 1025 aa7.95□□□□□ -1.14
COPA-203ENST00000481040 SETDB2Q96T68 719 aa7.95□□□□□ -1.14
COPA-203ENST00000481040 ETNK1Q9HBU6 452 aa7.95□□□□□ -1.14
COPA-203ENST00000481040 CAPN10Q9HC96 672 aa7.95□□□□□ -1.14
COPA-203ENST00000481040 PRKAG2Q9UGJ0 569 aa7.95□□□□□ -1.14
COPA-203ENST00000481040 SCARF1Q14162 830 aa7.94□□□□□ -1.14
COPA-203ENST00000481040 ENOX2Q16206 610 aaKnown RBP7.94□□□□□ -1.14
COPA-203ENST00000481040 GIMAP6Q6P9H5 292 aa7.94□□□□□ -1.14
COPA-203ENST00000481040 SLC9A9Q8IVB4 645 aa7.94□□□□□ -1.14
COPA-203ENST00000481040 TRIM52Q96A61 297 aa7.94□□□□□ -1.14
COPA-203ENST00000481040 NIF3L1Q9GZT8 377 aa7.94□□□□□ -1.14
COPA-203ENST00000481040 QTRT2Q9H974 415 aaKnown RBP7.94□□□□□ -1.14
COPA-203ENST00000481040 CYLDQ9NQC7 956 aa7.94□□□□□ -1.14
COPA-203ENST00000481040 SCHIP1Q9P0W5 487 aaPredicted RBP7.94□□□□□ -1.14
COPA-203ENST00000481040 PNMA6FA0A0J9YX94 578 aa7.93□□□□□ -1.14
COPA-203ENST00000481040 ALG1LQ6GMV1 187 aa7.93□□□□□ -1.14
COPA-203ENST00000481040 DNAJC2Q99543 621 aaKnown RBP7.93□□□□□ -1.14
COPA-203ENST00000481040 TMPRSS4Q9NRS4 437 aa7.93□□□□□ -1.14
COPA-203ENST00000481040 NLRP2Q9NX02 1062 aa7.93□□□□□ -1.14
COPA-203ENST00000481040 LRFN2Q9ULH4 789 aa7.93□□□□□ -1.14
COPA-203ENST00000481040 A6NJY4 79 aa7.92□□□□□ -1.14
COPA-203ENST00000481040 ZBTB39O15060 712 aa7.92□□□□□ -1.14
COPA-203ENST00000481040 ATP2B1P20020 1258 aa7.92□□□□□ -1.14
COPA-203ENST00000481040 INSM1Q01101 510 aaPredicted RBP7.92□□□□□ -1.14
COPA-203ENST00000481040 ATCAYQ86WG3 371 aa7.92□□□□□ -1.14
COPA-203ENST00000481040 NPAS3Q8IXF0 933 aa7.92□□□□□ -1.14
COPA-203ENST00000481040 LINC00528Q8N1L1 170 aa7.92□□□□□ -1.14
COPA-203ENST00000481040 MYO19Q96H55 970 aa7.92□□□□□ -1.14
COPA-203ENST00000481040 LNPKQ9C0E8 428 aa7.92□□□□□ -1.14
COPA-203ENST00000481040 ACBD3Q9H3P7 528 aa7.92□□□□□ -1.14
COPA-203ENST00000481040 CUEDC1Q9NWM3 386 aaPredicted RBP7.92□□□□□ -1.14
COPA-203ENST00000481040 STK17AQ9UEE5 414 aa7.92□□□□□ -1.14
COPA-203ENST00000481040 NCLP19338 710 aaKnown RBP7.91□□□□□ -1.14
COPA-203ENST00000481040 BRD2P25440 801 aaKnown RBP7.91□□□□□ -1.14
COPA-203ENST00000481040 GNA15P30679 374 aa7.91□□□□□ -1.14
COPA-203ENST00000481040 PSMA6P60900 246 aaKnown RBP7.91□□□□□ -1.14
COPA-203ENST00000481040 CBLBQ13191 982 aa7.91□□□□□ -1.14
COPA-203ENST00000481040 ESCO1Q5FWF5 840 aa7.91□□□□□ -1.14
COPA-203ENST00000481040 FAM26DQ5JW98 314 aa7.91□□□□□ -1.14
COPA-203ENST00000481040 GJD3Q8N144 294 aa7.91□□□□□ -1.14
COPA-203ENST00000481040 SLC16A10Q8TF71 515 aa7.91□□□□□ -1.14
COPA-203ENST00000481040 DHX38Q92620 1227 aaKnown RBP7.91□□□□□ -1.14
COPA-203ENST00000481040 DNMT3LQ9UJW3 386 aa7.91□□□□□ -1.14
COPA-203ENST00000481040 POLIQ9UNA4 740 aa7.91□□□□□ -1.14
COPA-203ENST00000481040 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.91□□□□□ -1.14
COPA-203ENST00000481040 EMILIN1Q9Y6C2 1016 aa7.91□□□□□ -1.14
COPA-203ENST00000481040 GNRH1P01148 92 aa7.9□□□□□ -1.14
COPA-203ENST00000481040 SMTNP53814 917 aa7.9□□□□□ -1.14
COPA-203ENST00000481040 GNL2Q13823 731 aaKnown RBP7.9□□□□□ -1.14
COPA-203ENST00000481040 MTFR1Q15390 333 aa7.9□□□□□ -1.14
COPA-203ENST00000481040 CYP2U1Q7Z449 544 aa7.9□□□□□ -1.14
COPA-203ENST00000481040 NOP9Q86U38 636 aaKnown RBP7.9□□□□□ -1.14
COPA-203ENST00000481040 CCDC116Q8IYX3 515 aa7.9□□□□□ -1.14
COPA-203ENST00000481040 ZNF784Q8NCA9 323 aaPredicted RBP7.9□□□□□ -1.14
COPA-203ENST00000481040 IRF7Q92985 503 aa7.9□□□□□ -1.14
COPA-203ENST00000481040 SOS2Q07890 1332 aaPredicted RBP7.89□□□□□ -1.15
COPA-203ENST00000481040 BMP2P12643 396 aa7.89□□□□□ -1.15
COPA-203ENST00000481040 MZF1P28698 734 aaPredicted RBP7.89□□□□□ -1.15
COPA-203ENST00000481040 GTF2F1P35269 517 aaKnown RBP eCLIP7.89□□□□□ -1.15
COPA-203ENST00000481040 USP5P45974 858 aa7.89□□□□□ -1.15
COPA-203ENST00000481040 TNNI2P48788 182 aa7.89□□□□□ -1.15
COPA-203ENST00000481040 DHX9Q08211 1270 aaKnown RBP7.89□□□□□ -1.15
COPA-203ENST00000481040 PPP1R26Q5T8A7 1209 aaPredicted RBP7.89□□□□□ -1.15
COPA-203ENST00000481040 ARMC5Q96C12 935 aa7.89□□□□□ -1.15
COPA-203ENST00000481040 CHMP3Q9Y3E7 222 aa7.89□□□□□ -1.15
COPA-203ENST00000481040 DNM1Q05193 864 aaKnown RBP7.88□□□□□ -1.15
COPA-203ENST00000481040 FBF1Q8TES7 1133 aa7.88□□□□□ -1.15
COPA-203ENST00000481040 GMLQ99445 158 aa7.88□□□□□ -1.15
COPA-203ENST00000481040 CFHR5Q9BXR6 569 aa7.88□□□□□ -1.15
COPA-203ENST00000481040 AK5Q9Y6K8 562 aa7.88□□□□□ -1.15
COPA-203ENST00000481040 ANKRD62A6NC57 917 aa7.87□□□□□ -1.15
COPA-203ENST00000481040 MAN1A2O60476 641 aa7.87□□□□□ -1.15
COPA-203ENST00000481040 LILRA1O75019 489 aa7.87□□□□□ -1.15
COPA-203ENST00000481040 PDGFAP04085 211 aa7.87□□□□□ -1.15
COPA-203ENST00000481040 VSIG8P0DPA2 414 aa7.87□□□□□ -1.15
COPA-203ENST00000481040 DNAJA1P31689 397 aaKnown RBP7.87□□□□□ -1.15
COPA-203ENST00000481040 POTEAQ6S8J7 498 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms