RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 BTBD11A6QL63 1104 aa15.67■□□□□ 0.1
CCNL1-216ENST00000475298 U2AF2P26368 475 aaKnown RBP eCLIP15.67■□□□□ 0.11e-17■■■□□ 18.5
CCNL1-216ENST00000475298 TEFQ10587 303 aa15.67■□□□□ 0.1
CCNL1-216ENST00000475298 PI4KAP1Q8N8J0 262 aa15.67■□□□□ 0.1
CCNL1-216ENST00000475298 KDM3BQ7LBC6 1761 aa15.66■□□□□ 0.1
CCNL1-216ENST00000475298 PTMAP06454 111 aaKnown RBP15.66■□□□□ 0.1
CCNL1-216ENST00000475298 ESYT1Q9BSJ8 1104 aa15.66■□□□□ 0.1
CCNL1-216ENST00000475298 ZNF142P52746 1687 aaPredicted RBP15.66■□□□□ 0.1
CCNL1-216ENST00000475298 ST18O60284 1047 aa15.65■□□□□ 0.1
CCNL1-216ENST00000475298 MAP4K4O95819 1239 aaPredicted RBP15.65■□□□□ 0.1
CCNL1-216ENST00000475298 C17orf53Q8N3J3 647 aaPredicted RBP15.65■□□□□ 0.1
CCNL1-216ENST00000475298 SSH3Q8TE77 659 aa15.65■□□□□ 0.1
CCNL1-216ENST00000475298 CHAMP1Q96JM3 812 aa15.65■□□□□ 0.1
CCNL1-216ENST00000475298 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
CCNL1-216ENST00000475298 PRAMEF22A3QJZ6 481 aa15.65■□□□□ 0.1
CCNL1-216ENST00000475298 SURF6O75683 361 aaKnown RBP15.65■□□□□ 0.1
CCNL1-216ENST00000475298 AKAP4Q5JQC9 854 aa15.65■□□□□ 0.1
CCNL1-216ENST00000475298 ANKRD7Q92527 254 aa15.65■□□□□ 0.1
CCNL1-216ENST00000475298 PALD1Q9ULE6 856 aa15.65■□□□□ 0.1
CCNL1-216ENST00000475298 AXIN2Q9Y2T1 843 aa15.65■□□□□ 0.1
CCNL1-216ENST00000475298 CHMLP26374 656 aa15.64■□□□□ 0.09
CCNL1-216ENST00000475298 ARHGEF25Q86VW2 580 aa15.64■□□□□ 0.09
CCNL1-216ENST00000475298 IL25Q9H293 177 aa15.64■□□□□ 0.09
CCNL1-216ENST00000475298 SRGAP3O43295 1099 aa15.64■□□□□ 0.09
CCNL1-216ENST00000475298 PLEKHO1Q53GL0 409 aaPredicted RBP15.64■□□□□ 0.09
CCNL1-216ENST00000475298 BEND3Q5T5X7 828 aa15.64■□□□□ 0.09
CCNL1-216ENST00000475298 PLCD3Q8N3E9 789 aa15.64■□□□□ 0.09
CCNL1-216ENST00000475298 ANKRD24Q8TF21 1146 aa15.64■□□□□ 0.09
CCNL1-216ENST00000475298 DNAAF4Q8WXU2 420 aa15.64■□□□□ 0.09
CCNL1-216ENST00000475298 ANO2Q9NQ90 1003 aa15.64■□□□□ 0.09
CCNL1-216ENST00000475298 SPTLC3Q9NUV7 552 aa15.64■□□□□ 0.09
CCNL1-216ENST00000475298 LMO7Q8WWI1 1683 aa15.63■□□□□ 0.09
CCNL1-216ENST00000475298 PROSER3Q2NL68 480 aa15.63■□□□□ 0.09
CCNL1-216ENST00000475298 MPNDQ8N594 471 aa15.63■□□□□ 0.09
CCNL1-216ENST00000475298 STAP2Q9UGK3 403 aa15.63■□□□□ 0.09
CCNL1-216ENST00000475298 RNMTO43148 476 aaKnown RBP15.63■□□□□ 0.09
CCNL1-216ENST00000475298 NEK4P51957 841 aa15.63■□□□□ 0.09
CCNL1-216ENST00000475298 ADCY9O60503 1353 aa15.63■□□□□ 0.09
CCNL1-216ENST00000475298 NPHP4O75161 1426 aaPredicted RBP15.63■□□□□ 0.09
CCNL1-216ENST00000475298 IRX5P78411 483 aaPredicted RBP15.62■□□□□ 0.09
CCNL1-216ENST00000475298 POLA2Q14181 598 aa15.62■□□□□ 0.09
CCNL1-216ENST00000475298 C1orf141Q5JVX7 400 aa15.62■□□□□ 0.09
CCNL1-216ENST00000475298 NOL8Q76FK4 1167 aaKnown RBP15.62■□□□□ 0.09
CCNL1-216ENST00000475298 RHPN1Q8TCX5 695 aa15.62■□□□□ 0.09
CCNL1-216ENST00000475298 ZNF771Q7L3S4 317 aaPredicted RBP15.61■□□□□ 0.09
CCNL1-216ENST00000475298 PHRF1Q9P1Y6 1649 aaKnown RBP15.61■□□□□ 0.09
CCNL1-216ENST00000475298 HOXB7P09629 217 aa15.61■□□□□ 0.09
CCNL1-216ENST00000475298 TTC12Q9H892 705 aaPredicted RBP15.61■□□□□ 0.09
CCNL1-216ENST00000475298 ZC3H6P61129 1189 aaKnown RBP15.6■□□□□ 0.09
CCNL1-216ENST00000475298 FOXD4L5Q5VV16 416 aaPredicted RBP15.6■□□□□ 0.09
CCNL1-216ENST00000475298 FOXD4L4Q8WXT5 416 aaPredicted RBP15.6■□□□□ 0.09
CCNL1-216ENST00000475298 SLIT3O75094 1523 aa15.59■□□□□ 0.09
CCNL1-216ENST00000475298 AMOTQ4VCS5 1084 aa15.59■□□□□ 0.09
CCNL1-216ENST00000475298 KRT28Q7Z3Y7 464 aa15.59■□□□□ 0.09
CCNL1-216ENST00000475298 PI4K2BQ8TCG2 481 aa15.59■□□□□ 0.09
CCNL1-216ENST00000475298 TMX3Q96JJ7 454 aa15.59■□□□□ 0.09
CCNL1-216ENST00000475298 FEZ1Q99689 392 aa15.59■□□□□ 0.09
CCNL1-216ENST00000475298 TSPY26PQ9H489 355 aa15.59■□□□□ 0.09
CCNL1-216ENST00000475298 MAP3K2Q9Y2U5 619 aa15.59■□□□□ 0.09
CCNL1-216ENST00000475298 RGPD5Q99666 1765 aa15.59■□□□□ 0.09
CCNL1-216ENST00000475298 ADAMTSL3P82987 1691 aa15.59■□□□□ 0.09
CCNL1-216ENST00000475298 GIGYF1O75420 1035 aaPredicted RBP15.58■□□□□ 0.09
CCNL1-216ENST00000475298 CWF19L2Q2TBE0 894 aaKnown RBP15.58■□□□□ 0.09
CCNL1-216ENST00000475298 DDX17Q92841 729 aaKnown RBP15.58■□□□□ 0.09
CCNL1-216ENST00000475298 UPF3BQ9BZI7 483 aaKnown RBP15.58■□□□□ 0.09
CCNL1-216ENST00000475298 DBF4Q9UBU7 674 aaPredicted RBP15.58■□□□□ 0.09
CCNL1-216ENST00000475298 RIOK3O14730 519 aaKnown RBP15.58■□□□□ 0.08
CCNL1-216ENST00000475298 CTIFO43310 598 aaKnown RBP15.58■□□□□ 0.08
CCNL1-216ENST00000475298 RAB11FIP3O75154 756 aa15.58■□□□□ 0.08
CCNL1-216ENST00000475298 PROSER2Q86WR7 435 aaPredicted RBP15.58■□□□□ 0.08
CCNL1-216ENST00000475298 CWC22Q9HCG8 908 aaKnown RBP15.58■□□□□ 0.08
CCNL1-216ENST00000475298 OGFRQ9NZT2 677 aa15.58■□□□□ 0.08
CCNL1-216ENST00000475298 SLFN14P0C7P3 912 aa15.57■□□□□ 0.08
CCNL1-216ENST00000475298 KIF1BPQ96EK5 621 aa15.57■□□□□ 0.08
CCNL1-216ENST00000475298 AOX1Q06278 1338 aa15.56■□□□□ 0.08
CCNL1-216ENST00000475298 MCCP23508 829 aa15.56■□□□□ 0.08
CCNL1-216ENST00000475298 PA2G4Q9UQ80 394 aaKnown RBP15.56■□□□□ 0.08
CCNL1-216ENST00000475298 NCAPD2Q15021 1401 aa15.56■□□□□ 0.08
CCNL1-216ENST00000475298 TRPM3Q9HCF6 1732 aaPredicted RBP15.56■□□□□ 0.08
CCNL1-216ENST00000475298 MBD3O95983 291 aa15.56■□□□□ 0.08
CCNL1-216ENST00000475298 GABPB1Q06547 395 aaPredicted RBP15.56■□□□□ 0.08
CCNL1-216ENST00000475298 AIMP1Q12904 312 aaKnown RBP15.56■□□□□ 0.08
CCNL1-216ENST00000475298 SLC39A6Q13433 755 aa15.56■□□□□ 0.08
CCNL1-216ENST00000475298 OS9Q13438 667 aaPredicted RBP15.56■□□□□ 0.08
CCNL1-216ENST00000475298 CDK11BP21127 795 aaKnown RBP15.55■□□□□ 0.08
CCNL1-216ENST00000475298 KCNJ4P48050 445 aa15.55■□□□□ 0.08
CCNL1-216ENST00000475298 C9orf78Q9NZ63 289 aaPredicted RBP15.55■□□□□ 0.08
CCNL1-216ENST00000475298 SLC20A2Q08357 652 aa15.54■□□□□ 0.08
CCNL1-216ENST00000475298 USP25Q9UHP3 1055 aa15.54■□□□□ 0.08
CCNL1-216ENST00000475298 ERBB3P21860 1342 aa15.54■□□□□ 0.08
CCNL1-216ENST00000475298 C1orf167Q5SNV9 1468 aa15.54■□□□□ 0.08
CCNL1-216ENST00000475298 HEG1Q9ULI3 1381 aa15.54■□□□□ 0.08
CCNL1-216ENST00000475298 KSR2Q6VAB6 950 aa15.54■□□□□ 0.08
CCNL1-216ENST00000475298 PAXIP1Q6ZW49 1069 aaPredicted RBP15.53■□□□□ 0.08
CCNL1-216ENST00000475298 CTNNA3Q9UI47 895 aa15.53■□□□□ 0.08
CCNL1-216ENST00000475298 ANAPC15P60006 121 aa15.53■□□□□ 0.08
CCNL1-216ENST00000475298 CWC27Q6UX04 472 aaKnown RBP15.53■□□□□ 0.08
CCNL1-216ENST00000475298 DIAPH3Q9NSV4 1193 aa15.53■□□□□ 0.08
CCNL1-216ENST00000475298 NLRP2Q9NX02 1062 aa15.53■□□□□ 0.08
CCNL1-216ENST00000475298 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms