RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 LARP6Q9BRS8 491 aaKnown RBP15.15■□□□□ 0.02
RNF220-211ENST00000474956 STAP2Q9UGK3 403 aa15.15■□□□□ 0.02
RNF220-211ENST00000474956 TNS3Q68CZ2 1445 aa15.15■□□□□ 0.02
RNF220-211ENST00000474956 CADPS2Q86UW7 1296 aa15.15■□□□□ 0.02
RNF220-211ENST00000474956 TLR7Q9NYK1 1049 aaKnown RBP15.15■□□□□ 0.02
RNF220-211ENST00000474956 SCN11AQ9UI33 1791 aa15.14■□□□□ 0.01
RNF220-211ENST00000474956 RRP9O43818 475 aaKnown RBP15.14■□□□□ 0.01
RNF220-211ENST00000474956 REC8O95072 547 aa15.14■□□□□ 0.01
RNF220-211ENST00000474956 NEK4P51957 841 aa15.14■□□□□ 0.01
RNF220-211ENST00000474956 DDX21Q9NR30 783 aaKnown RBP eCLIP15.14■□□□□ 0.01
RNF220-211ENST00000474956 ATP5J2-PTCD1G3V325 749 aa15.14■□□□□ 0.01
RNF220-211ENST00000474956 PTCD1O75127 700 aaKnown RBP15.14■□□□□ 0.01
RNF220-211ENST00000474956 BAG4O95429 457 aaKnown RBP15.14■□□□□ 0.01
RNF220-211ENST00000474956 RIC3Q7Z5B4 369 aa15.14■□□□□ 0.01
RNF220-211ENST00000474956 ANP32BQ92688 251 aaKnown RBP15.14■□□□□ 0.01
RNF220-211ENST00000474956 DDX49Q9Y6V7 483 aaKnown RBP15.14■□□□□ 0.01
RNF220-211ENST00000474956 PPP1R9BQ96SB3 815 aa15.14■□□□□ 0.01
RNF220-211ENST00000474956 MYD88Q99836 296 aa15.14■□□□□ 0.01
RNF220-211ENST00000474956 NASPP49321 788 aaPredicted RBP15.13■□□□□ 0.01
RNF220-211ENST00000474956 HSP90AA2PQ14568 343 aaPredicted RBP15.13■□□□□ 0.01
RNF220-211ENST00000474956 IFNL2Q8IZJ0 200 aa15.13■□□□□ 0.01
RNF220-211ENST00000474956 SPG7Q9UQ90 795 aa15.13■□□□□ 0.01
RNF220-211ENST00000474956 GRM8O00222 908 aa15.12■□□□□ 0.01
RNF220-211ENST00000474956 NUCB2P80303 420 aa15.12■□□□□ 0.01
RNF220-211ENST00000474956 KIF1BPQ96EK5 621 aa15.12■□□□□ 0.01
RNF220-211ENST00000474956 CWC27Q6UX04 472 aaKnown RBP15.12■□□□□ 0.01
RNF220-211ENST00000474956 CCDC8Q9H0W5 538 aaPredicted RBP15.12■□□□□ 0.01
RNF220-211ENST00000474956 STRN4Q9NRL3 753 aa15.12■□□□□ 0.01
RNF220-211ENST00000474956 HYPKQ9NX55 129 aa15.12■□□□□ 0.01
RNF220-211ENST00000474956 ADAMTS7Q9UKP4 1686 aa15.12■□□□□ 0.01
RNF220-211ENST00000474956 LRP10Q7Z4F1 713 aa15.12■□□□□ 0.01
RNF220-211ENST00000474956 DDX54Q8TDD1 881 aaKnown RBP15.12■□□□□ 0.01
RNF220-211ENST00000474956 PRDM11Q9NQV5 511 aa15.12■□□□□ 0.01
RNF220-211ENST00000474956 NDUFB9Q9Y6M9 179 aa15.11■□□□□ 0.01
RNF220-211ENST00000474956 SASH1O94885 1247 aa15.11■□□□□ 0.01
RNF220-211ENST00000474956 CPA1P15085 419 aa15.11■□□□□ 0.01
RNF220-211ENST00000474956 COL9A3Q14050 684 aaPredicted RBP15.11■□□□□ 0.01
RNF220-211ENST00000474956 TOM1L2Q6ZVM7 507 aa15.1■□□□□ 0.01
RNF220-211ENST00000474956 CHGBP05060 677 aa15.1■□□□□ 0.01
RNF220-211ENST00000474956 LINS1Q8NG48 757 aa15.1■□□□□ 0.01
RNF220-211ENST00000474956 NEURL1BA8MQ27 555 aa15.1■□□□□ 0.01
RNF220-211ENST00000474956 RAB11FIP3O75154 756 aa15.1■□□□□ 0.01
RNF220-211ENST00000474956 CABP4P57796 275 aa15.1■□□□□ 0.01
RNF220-211ENST00000474956 AACSQ86V21 672 aa15.09■□□□□ 0.01
RNF220-211ENST00000474956 TTC5Q8N0Z6 440 aa15.09■□□□□ 0.01
RNF220-211ENST00000474956 EAF2Q96CJ1 260 aaPredicted RBP15.09■□□□□ 0.01
RNF220-211ENST00000474956 EDC3Q96F86 508 aaKnown RBP15.09■□□□□ 0.01
RNF220-211ENST00000474956 ZDHHC9Q9Y397 364 aa15.09■□□□□ 0.01
RNF220-211ENST00000474956 CCDC9Q9Y3X0 531 aaKnown RBP15.09■□□□□ 0.01
RNF220-211ENST00000474956 OVOS2A0A0G2JMS6 1433 aa15.09■□□□□ 0.01
RNF220-211ENST00000474956 TPM2P07951 284 aa15.09■□□□□ 0.01
RNF220-211ENST00000474956 ZNF445P59923 1031 aa15.09■□□□□ 0.01
RNF220-211ENST00000474956 KDM4FA0A1W2PPD8 638 aa15.09■□□□□ 0.01
RNF220-211ENST00000474956 ALDH1L1O75891 902 aa15.09■□□□□ 0.01
RNF220-211ENST00000474956 ZSCAN30Q86W11 494 aa15.09■□□□□ 0.01
RNF220-211ENST00000474956 RASEFQ8IZ41 740 aa15.09■□□□□ 0.01
RNF220-211ENST00000474956 FOXD4L6Q3SYB3 417 aaPredicted RBP15.08■□□□□ 0
RNF220-211ENST00000474956 LARP1Q6PKG0 1096 aaKnown RBP15.08■□□□□ 0
RNF220-211ENST00000474956 FOXD4L3Q6VB84 417 aaPredicted RBP15.08■□□□□ 0
RNF220-211ENST00000474956 TMX3Q96JJ7 454 aa15.08■□□□□ 0
RNF220-211ENST00000474956 DCAF5Q96JK2 942 aa15.08■□□□□ 0
RNF220-211ENST00000474956 CWC22Q9HCG8 908 aaKnown RBP15.08■□□□□ 0
RNF220-211ENST00000474956 SLAIN2Q9P270 581 aa15.08■□□□□ 0
RNF220-211ENST00000474956 NBPF26B4DH59 902 aa15.08■□□□□ 0
RNF220-211ENST00000474956 ST18O60284 1047 aa15.08■□□□□ 0
RNF220-211ENST00000474956 CYP2E1P05181 493 aaPredicted RBP15.08■□□□□ 0
RNF220-211ENST00000474956 NBPF14Q5TI25 921 aa15.08■□□□□ 0
RNF220-211ENST00000474956 NBPF10Q6P3W6 841 aaKnown RBP15.08■□□□□ 0
RNF220-211ENST00000474956 UBE3BQ7Z3V4 1068 aa15.08■□□□□ 0
RNF220-211ENST00000474956 NBPF15Q8N660 670 aa15.08■□□□□ 0
RNF220-211ENST00000474956 MTX1Q13505 466 aa15.07■□□□□ 0
RNF220-211ENST00000474956 GCKRQ14397 625 aa15.07■□□□□ 0
RNF220-211ENST00000474956 MCTP1Q6DN14 999 aa15.07■□□□□ 0
RNF220-211ENST00000474956 A1BGP04217 495 aa15.07■□□□□ 0
RNF220-211ENST00000474956 DCCP43146 1447 aa15.07■□□□□ 0
RNF220-211ENST00000474956 PTH1RQ03431 593 aa15.07■□□□□ 0
RNF220-211ENST00000474956 TTLL7Q6ZT98 887 aa15.07■□□□□ 0
RNF220-211ENST00000474956 ANKRD13DQ6ZTN6 518 aa15.07■□□□□ 0
RNF220-211ENST00000474956 KAT6BQ8WYB5 2073 aa15.07■□□□□ 0
RNF220-211ENST00000474956 STRCQ7RTU9 1775 aa15.06■□□□□ 0
RNF220-211ENST00000474956 SNRPA1P09661 255 aaKnown RBP15.06■□□□□ 0
RNF220-211ENST00000474956 CLASRPQ8N2M8 674 aaKnown RBP15.06■□□□□ 0
RNF220-211ENST00000474956 SGSM2O43147 1006 aa15.05■□□□□ 0
RNF220-211ENST00000474956 DDX58O95786 925 aaKnown RBP15.05■□□□□ 0
RNF220-211ENST00000474956 LMBRD1Q9NUN5 540 aa15.05■□□□□ 0
RNF220-211ENST00000474956 FAM227BQ96M60 508 aa15.05■□□□□ -0
RNF220-211ENST00000474956 METTL22Q9BUU2 404 aaPredicted RBP15.05■□□□□ -0
RNF220-211ENST00000474956 BOLA2Q9H3K6 86 aa15.05■□□□□ -0
RNF220-211ENST00000474956 IFIT2P09913 472 aaKnown RBP15.05■□□□□ -0
RNF220-211ENST00000474956 MSNP26038 577 aaKnown RBP15.05■□□□□ -0
RNF220-211ENST00000474956 FMNL2Q96PY5 1086 aa15.05■□□□□ -0
RNF220-211ENST00000474956 LSG1Q9H089 658 aaKnown RBP15.05■□□□□ -0
RNF220-211ENST00000474956 GLI3P10071 1580 aa15.05■□□□□ -0
RNF220-211ENST00000474956 ZNF330Q9Y3S2 320 aaPredicted RBP15.04■□□□□ -0
RNF220-211ENST00000474956 ZSCAN23Q3MJ62 389 aa15.04■□□□□ -0
RNF220-211ENST00000474956 HS1BP3Q53T59 392 aa15.04■□□□□ -0
RNF220-211ENST00000474956 CAVIN1Q6NZI2 390 aaKnown RBP15.04■□□□□ -0
RNF220-211ENST00000474956 WDR17Q8IZU2 1322 aa15.04■□□□□ -0
RNF220-211ENST00000474956 NCLP19338 710 aaKnown RBP15.04■□□□□ -0
RNF220-211ENST00000474956 CNTROBQ8N137 903 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms