RNA–Protein interactions for RNA: ENST00000467908.1

PDXK-209, Transcript of pyridoxal kinase, human

TSL 3 BASIC

Gene PDXK, Length 7,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDXK-209	ENST00000467908	MAP4K4	O95819	1239 aa	Predicted RBP	13.3	□□□□□ -0.28
PDXK-209	ENST00000467908	CT47B1	P0C2W7	299 aa	Predicted RBP	13.3	□□□□□ -0.28
PDXK-209	ENST00000467908	SLC39A6	Q13433	755 aa		13.3	□□□□□ -0.28
PDXK-209	ENST00000467908	ARHGEF10	O15013	1369 aa		13.29	□□□□□ -0.28
PDXK-209	ENST00000467908	FMNL2	Q96PY5	1086 aa		13.29	□□□□□ -0.28
PDXK-209	ENST00000467908	ATP6V1D	Q9Y5K8	247 aa		13.29	□□□□□ -0.28
PDXK-209	ENST00000467908	MTHFSD	Q2M296	383 aa	Known RBP	13.29	□□□□□ -0.28
PDXK-209	ENST00000467908	RALYL	Q86SE5	291 aa	Known RBP	13.29	□□□□□ -0.28
PDXK-209	ENST00000467908	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.29	□□□□□ -0.28
PDXK-209	ENST00000467908	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.28	□□□□□ -0.28
PDXK-209	ENST00000467908	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.28	□□□□□ -0.28
PDXK-209	ENST00000467908	GOLGA6L7	A0A1B0GV03	622 aa		13.28	□□□□□ -0.28
PDXK-209	ENST00000467908	PHACTR3	Q96KR7	559 aa		13.28	□□□□□ -0.28
PDXK-209	ENST00000467908	FAM98C	Q17RN3	349 aa	Known RBP	13.28	□□□□□ -0.28
PDXK-209	ENST00000467908	GBP2	P32456	591 aa	Predicted RBP	13.28	□□□□□ -0.28
PDXK-209	ENST00000467908	ARL1	P40616	181 aa	Predicted RBP	13.28	□□□□□ -0.28
PDXK-209	ENST00000467908	RNF214	Q8ND24	703 aa		13.28	□□□□□ -0.28
PDXK-209	ENST00000467908	MYO5B	Q9ULV0	1848 aa		13.28	□□□□□ -0.28
PDXK-209	ENST00000467908	ZFYVE9	O95405	1425 aa		13.27	□□□□□ -0.28
PDXK-209	ENST00000467908	PDIA4	P13667	645 aa	Known RBP	13.27	□□□□□ -0.28
PDXK-209	ENST00000467908	TTC39A	Q5SRH9	613 aa		13.27	□□□□□ -0.28
PDXK-209	ENST00000467908	CHMP5	Q9NZZ3	219 aa		13.27	□□□□□ -0.28
PDXK-209	ENST00000467908	USP21	Q9UK80	565 aa		13.27	□□□□□ -0.28
PDXK-209	ENST00000467908	FAM135B	Q49AJ0	1406 aa		13.27	□□□□□ -0.29
PDXK-209	ENST00000467908	OLFM4	Q6UX06	510 aa		13.27	□□□□□ -0.29
PDXK-209	ENST00000467908	NFATC2IP	Q8NCF5	419 aa		13.27	□□□□□ -0.29
PDXK-209	ENST00000467908	PIK3R4	Q99570	1358 aa		13.27	□□□□□ -0.29
PDXK-209	ENST00000467908	WDHD1	O75717	1129 aa	Predicted RBP	13.27	□□□□□ -0.29
PDXK-209	ENST00000467908	SASS6	Q6UVJ0	657 aa		13.27	□□□□□ -0.29
PDXK-209	ENST00000467908	RGS22	Q8NE09	1264 aa		13.27	□□□□□ -0.29
PDXK-209	ENST00000467908	ANKRD18A	Q8IVF6	992 aa		13.26	□□□□□ -0.29
PDXK-209	ENST00000467908	BIN2	Q9UBW5	565 aa	Predicted RBP	13.26	□□□□□ -0.29
PDXK-209	ENST00000467908	MBIP	Q9NS73	344 aa		13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	SBNO1	A3KN83	1393 aa		13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	MROH2A	A6NES4	1674 aa		13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	NEXMIF	Q5QGS0	1516 aa		13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	ATF7IP	Q6VMQ6	1270 aa		13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	NUP133	Q8WUM0	1156 aa		13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	CLGN	O14967	610 aa		13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	ANXA1	P04083	346 aa		13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	GOLGA6L10	A0A0M3HER8	536 aa		13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	GOLGA6L10	A6NI86	522 aa		13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	PIP4K2A	P48426	406 aa	Predicted RBP	13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	BRINP3	Q76B58	766 aa		13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	FAM177A1	Q8N128	213 aa	Predicted RBP	13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	CCDC112	Q8NEF3	446 aa		13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	LNPK	Q9C0E8	428 aa		13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	MYO6	Q9UM54	1294 aa		13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	DEPDC5	O75140	1603 aa		13.25	□□□□□ -0.29
PDXK-209	ENST00000467908	POLR3A	O14802	1390 aa	Predicted RBP	13.24	□□□□□ -0.29
PDXK-209	ENST00000467908	AKAP4	Q5JQC9	854 aa		13.24	□□□□□ -0.29
PDXK-209	ENST00000467908	SSH1	Q8WYL5	1049 aa		13.24	□□□□□ -0.29
PDXK-209	ENST00000467908	SMC2	O95347	1197 aa		13.24	□□□□□ -0.29
PDXK-209	ENST00000467908	SBNO2	Q9Y2G9	1366 aa		13.24	□□□□□ -0.29
PDXK-209	ENST00000467908	ZPR1	O75312	459 aa		13.24	□□□□□ -0.29
PDXK-209	ENST00000467908		F6X3S4	739 aa		13.24	□□□□□ -0.29
PDXK-209	ENST00000467908	IL13	P35225	146 aa		13.23	□□□□□ -0.29
PDXK-209	ENST00000467908	NBPF6	Q5VWK0	638 aa		13.23	□□□□□ -0.29
PDXK-209	ENST00000467908	NBPF4	Q96M43	638 aa		13.23	□□□□□ -0.29
PDXK-209	ENST00000467908	SRCIN1	Q9C0H9	1055 aa		13.23	□□□□□ -0.29
PDXK-209	ENST00000467908	GNAI3	P08754	354 aa		13.23	□□□□□ -0.29
PDXK-209	ENST00000467908	BCORL1	Q5H9F3	1711 aa		13.23	□□□□□ -0.29
PDXK-209	ENST00000467908	SMC1A	Q14683	1233 aa	Known RBP	13.23	□□□□□ -0.29
PDXK-209	ENST00000467908	DZIP1	Q86YF9	867 aa	Known RBP	13.23	□□□□□ -0.29
PDXK-209	ENST00000467908	GNAI2	P04899	355 aa		13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	CEP63	Q96MT8	703 aa		13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	SURF6	O75683	361 aa	Known RBP	13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	USP6	P35125	1406 aa		13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	MPHOSPH8	Q99549	860 aa		13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	LAMC1	P11047	1609 aa		13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	CSPG5	O95196	566 aa		13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	ATP6V1A	P38606	617 aa		13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	GTF2A1	P52655	376 aa	Predicted RBP	13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	KIAA0232	Q92628	1395 aa		13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	CCT4	P50991	539 aa	Known RBP	13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	MYD88	Q99836	296 aa		13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	PABPN1L	A6NDY0	278 aa	Known RBP	13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	XBP1	P17861	261 aa		13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	TRIM21	P19474	475 aa	Known RBP	13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	ANKIB1	Q9P2G1	1089 aa		13.22	□□□□□ -0.29
PDXK-209	ENST00000467908	CCDC113	Q9H0I3	377 aa		13.21	□□□□□ -0.29
PDXK-209	ENST00000467908	EZR	P15311	586 aa	Known RBP	13.21	□□□□□ -0.29
PDXK-209	ENST00000467908	TERF1	P54274	439 aa		13.21	□□□□□ -0.29
PDXK-209	ENST00000467908	ERC1	Q8IUD2	1116 aa		13.21	□□□□□ -0.29
PDXK-209	ENST00000467908	ZBTB3	Q9H5J0	574 aa		13.21	□□□□□ -0.29
PDXK-209	ENST00000467908	NKTR	P30414	1462 aa	Known RBP	13.21	□□□□□ -0.29
PDXK-209	ENST00000467908	DES	P17661	470 aa		13.21	□□□□□ -0.29
PDXK-209	ENST00000467908	STK3	Q13188	491 aa		13.21	□□□□□ -0.29
PDXK-209	ENST00000467908	ZKSCAN1	P17029	563 aa	Predicted RBP	13.21	□□□□□ -0.3
PDXK-209	ENST00000467908	GPT	P24298	496 aa		13.21	□□□□□ -0.3
PDXK-209	ENST00000467908	TMCO4	Q5TGY1	634 aa		13.21	□□□□□ -0.3
PDXK-209	ENST00000467908	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
PDXK-209	ENST00000467908	LARP1	Q6PKG0	1096 aa	Known RBP	13.2	□□□□□ -0.3
PDXK-209	ENST00000467908	PDCL2	Q8N4E4	241 aa		13.2	□□□□□ -0.3
PDXK-209	ENST00000467908	TMEM57	Q8N5G2	664 aa		13.2	□□□□□ -0.3
PDXK-209	ENST00000467908	CALCOCO1	Q9P1Z2	691 aa		13.2	□□□□□ -0.3
PDXK-209	ENST00000467908	ATP7B	P35670	1465 aa		13.2	□□□□□ -0.3
PDXK-209	ENST00000467908	TMCO5B	A8MYB1	307 aa		13.2	□□□□□ -0.3
PDXK-209	ENST00000467908	RARS	P54136	660 aa	Known RBP	13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms