RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 LMOD1P29536 600 aaPredicted RBP6.28□□□□□ -1.4
RNU6ATAC28P-201ENST00000459249 FAM196AQ6ZSG2 479 aa6.28□□□□□ -1.4
RNU6ATAC28P-201ENST00000459249 OCEL1Q9H607 264 aa6.28□□□□□ -1.4
RNU6ATAC28P-201ENST00000459249 NLRP2Q9NX02 1062 aa6.28□□□□□ -1.4
RNU6ATAC28P-201ENST00000459249 POLKQ9UBT6 870 aa6.28□□□□□ -1.4
RNU6ATAC28P-201ENST00000459249 TRIM35Q9UPQ4 493 aa6.28□□□□□ -1.4
RNU6ATAC28P-201ENST00000459249 PCDHGA10Q9Y5H3 936 aa6.28□□□□□ -1.4
RNU6ATAC28P-201ENST00000459249 EMILIN1Q9Y6C2 1016 aa6.28□□□□□ -1.4
RNU6ATAC28P-201ENST00000459249 OVOS2A0A0G2JMS6 1433 aa6.27□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.27□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 CARNS1A5YM72 827 aa6.27□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 IL2RBP14784 551 aa6.27□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 PDE3BQ13370 1112 aa6.27□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 DDB1Q16531 1140 aa6.27□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 TSR1Q2NL82 804 aaKnown RBP6.27□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 HSP90AB2PQ58FF8 381 aa6.27□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 MORC1Q86VD1 984 aa6.27□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 NUTM1Q86Y26 1132 aa6.27□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 RBM46Q8TBY0 533 aaKnown RBP6.27□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 TFIP11Q9UBB9 837 aaKnown RBP6.27□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 RGPD1P0DJD0 1748 aa6.26□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 IRX5P78411 483 aaPredicted RBP6.26□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 QPCTQ16769 361 aa6.26□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 FAM161AQ3B820 660 aa6.26□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 RTL5Q5HYW3 569 aaPredicted RBP6.26□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 PADI6Q6TGC4 694 aa6.26□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 DNAJC14Q6Y2X3 702 aaPredicted RBP6.26□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 SULF1Q8IWU6 871 aa6.26□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 FAM177A1Q8N128 213 aaPredicted RBP6.26□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 NLRP7Q8WX94 980 aa6.26□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 KIAA1522Q9P206 1035 aaPredicted RBP6.26□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 MAP2P11137 1827 aaKnown RBP6.26□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 MEGF6O75095 1541 aa6.25□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 TNS1Q9HBL0 1735 aaKnown RBP6.25□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 MOXD2PA6NHM9 499 aa6.25□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 EXOC5O00471 708 aa6.25□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 GPR37L1O60883 481 aa6.25□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 IER5LQ5T953 404 aa6.25□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 NBPF6Q5VWK0 638 aa6.25□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 TMEM92Q6UXU6 159 aa6.25□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 LTV1Q96GA3 475 aaPredicted RBP6.25□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 NBPF4Q96M43 638 aa6.25□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 PARD3Q8TEW0 1356 aa6.25□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 IGSF1Q8N6C5 1336 aa6.25□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 KDRP35968 1356 aa6.24□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 SF3B2Q13435 895 aaKnown RBP6.24□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 EIF4A2Q14240 407 aaKnown RBP6.24□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 MARCH10Q8NA82 808 aaPredicted RBP6.24□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 RAPGEF4Q8WZA2 1011 aa6.24□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 MRRFQ96E11 262 aaKnown RBP6.24□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 UCN2Q96RP3 112 aa6.24□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 PCDHB15Q9Y5E8 787 aa6.24□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 MAFBQ9Y5Q3 323 aaPredicted RBP6.24□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 PKD1L3Q7Z443 1732 aa6.24□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 RGPD3A6NKT7 1758 aaPredicted RBP6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 RGPD2P0DJD1 1756 aa6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 RGPD4Q7Z3J3 1758 aa6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 COL3A1P02461 1466 aaPredicted RBP6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 SHANK3Q9BYB0 1731 aa6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 PPM1GO15355 546 aaPredicted RBP6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 TATP17735 454 aaPredicted RBP6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 VAMP1P23763 118 aa6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 ARID4AP29374 1257 aaPredicted RBP6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 TNNT2P45379 298 aaPredicted RBP6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 BAG6P46379 1132 aa6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 MTHFSP49914 203 aa6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 VAC14Q08AM6 782 aa6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 CC2D1BQ5T0F9 858 aaKnown RBP6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 ZCRB1Q8TBF4 217 aaKnown RBP6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 EYA1Q99502 592 aa6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 TRIM34Q9BYJ4 488 aa6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 NHSQ6T4R5 1651 aa6.23□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 SBF2Q86WG5 1849 aa6.22□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 TRIM37O94972 964 aa6.22□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 IL13P35225 146 aa6.22□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 C6orf132Q5T0Z8 1188 aa6.22□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 FAM182BQ5T319 152 aa6.22□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 PRR7Q8TB68 274 aa6.22□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 ZBTB3Q9H5J0 574 aa6.22□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 PCDH11XQ9BZA7 1347 aa6.22□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 PCDH11YQ9BZA8 1340 aa6.22□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 EP400Q96L91 3159 aa6.21□□□□□ -1.41
RNU6ATAC28P-201ENST00000459249 PLSCR1O15162 318 aa6.21□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 ZNF16P17020 682 aaPredicted RBP6.21□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 NDUFV2P19404 249 aa6.21□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 PRSS12P56730 875 aa6.21□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 CSPP1Q1MSJ5 1256 aa6.21□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 PIP4P2Q8N4L2 257 aa6.21□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 USHBP1Q8N6Y0 703 aa6.21□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 DRC1Q96MC2 740 aa6.21□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 CAMKK2Q96RR4 588 aa6.21□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 SPG7Q9UQ90 795 aa6.21□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 RREB1Q92766 1687 aa6.2□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 CYP27B1O15528 508 aa6.2□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 ATP9BO43861 1147 aa6.2□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 DIAPH1O60610 1272 aaKnown RBP6.2□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 TCF3P15923 654 aa6.2□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 PPP2R1AP30153 589 aa6.2□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 USP46P62068 366 aa6.2□□□□□ -1.42
RNU6ATAC28P-201ENST00000459249 SEMA3FQ13275 785 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms