RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 MTMR6Q9Y217 621 aa16.38■□□□□ 0.21
UBE2D3-210ENST00000453744 RAD50Q92878 1312 aa16.38■□□□□ 0.21
UBE2D3-210ENST00000453744 PIK3R4Q99570 1358 aa16.38■□□□□ 0.21
UBE2D3-210ENST00000453744 ME1P48163 572 aa16.38■□□□□ 0.21
UBE2D3-210ENST00000453744 TTC6Q86TZ1 520 aa16.38■□□□□ 0.21
UBE2D3-210ENST00000453744 SCAND2PQ9GZW5 306 aaPredicted RBP16.38■□□□□ 0.21
UBE2D3-210ENST00000453744 SOS1Q07889 1333 aaPredicted RBP16.38■□□□□ 0.21
UBE2D3-210ENST00000453744 ZSCAN20P17040 1043 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-210ENST00000453744 PTH1RQ03431 593 aa16.37■□□□□ 0.21
UBE2D3-210ENST00000453744 A0A0G2JS52 829 aa16.37■□□□□ 0.21
UBE2D3-210ENST00000453744 SLC26A8Q96RN1 970 aa16.37■□□□□ 0.21
UBE2D3-210ENST00000453744 RGS12O14924 1447 aa16.37■□□□□ 0.21
UBE2D3-210ENST00000453744 MED14O60244 1454 aa16.37■□□□□ 0.21
UBE2D3-210ENST00000453744 A0A087WWV3 80 aa16.36■□□□□ 0.21
UBE2D3-210ENST00000453744 NBPF7P0C2Y1 421 aaPredicted RBP16.36■□□□□ 0.21
UBE2D3-210ENST00000453744 ACEP12821 1306 aa16.36■□□□□ 0.21
UBE2D3-210ENST00000453744 ME3Q16798 604 aa16.36■□□□□ 0.21
UBE2D3-210ENST00000453744 ERCC4Q92889 916 aaPredicted RBP16.36■□□□□ 0.21
UBE2D3-210ENST00000453744 USP44Q9H0E7 712 aa16.36■□□□□ 0.21
UBE2D3-210ENST00000453744 ECHDC1Q9NTX5 307 aa16.36■□□□□ 0.21
UBE2D3-210ENST00000453744 PNPLA6Q8IY17 1366 aa16.36■□□□□ 0.21
UBE2D3-210ENST00000453744 SKILP12757 684 aa16.36■□□□□ 0.21
UBE2D3-210ENST00000453744 ASXL2Q76L83 1435 aa16.35■□□□□ 0.21
UBE2D3-210ENST00000453744 LARP1Q6PKG0 1096 aaKnown RBP16.35■□□□□ 0.21
UBE2D3-210ENST00000453744 KIF24Q5T7B8 1368 aa16.35■□□□□ 0.21
UBE2D3-210ENST00000453744 TNNT3P45378 269 aaPredicted RBP16.35■□□□□ 0.21
UBE2D3-210ENST00000453744 SHROOM2Q13796 1616 aa16.35■□□□□ 0.21
UBE2D3-210ENST00000453744 POGZQ7Z3K3 1410 aa16.35■□□□□ 0.21
UBE2D3-210ENST00000453744 KCNF1Q9H3M0 494 aa16.35■□□□□ 0.21
UBE2D3-210ENST00000453744 DDX19AQ9NUU7 478 aaKnown RBP16.35■□□□□ 0.21
UBE2D3-210ENST00000453744 USP16Q9Y5T5 823 aa16.35■□□□□ 0.21
UBE2D3-210ENST00000453744 ATP10DQ9P241 1426 aa16.34■□□□□ 0.21
UBE2D3-210ENST00000453744 TTC21BQ7Z4L5 1316 aa16.34■□□□□ 0.21
UBE2D3-210ENST00000453744 DNAAF4Q8WXU2 420 aa16.34■□□□□ 0.21
UBE2D3-210ENST00000453744 FAM227BQ96M60 508 aa16.34■□□□□ 0.21
UBE2D3-210ENST00000453744 MAP3K19Q56UN5 1328 aa16.34■□□□□ 0.21
UBE2D3-210ENST00000453744 MNS1Q8NEH6 495 aa16.34■□□□□ 0.21
UBE2D3-210ENST00000453744 SMTNL1A8MU46 457 aa16.34■□□□□ 0.21
UBE2D3-210ENST00000453744 KIF20AO95235 890 aa16.34■□□□□ 0.21
UBE2D3-210ENST00000453744 BIN1O00499 593 aa16.33■□□□□ 0.21
UBE2D3-210ENST00000453744 OGFRQ9NZT2 677 aa16.33■□□□□ 0.21
UBE2D3-210ENST00000453744 CCDC66A2RUB6 948 aa16.33■□□□□ 0.2
UBE2D3-210ENST00000453744 TPM4P67936 248 aa16.33■□□□□ 0.2
UBE2D3-210ENST00000453744 ISM2Q6H9L7 571 aa16.33■□□□□ 0.2
UBE2D3-210ENST00000453744 CHPF2Q9P2E5 772 aa16.33■□□□□ 0.2
UBE2D3-210ENST00000453744 POLR3GO15318 223 aaPredicted RBP16.33■□□□□ 0.2
UBE2D3-210ENST00000453744 CCT2P78371 535 aaKnown RBP16.33■□□□□ 0.2
UBE2D3-210ENST00000453744 CREB3L3Q68CJ9 461 aa16.33■□□□□ 0.2
UBE2D3-210ENST00000453744 KIF18AQ8NI77 898 aa16.33■□□□□ 0.2
UBE2D3-210ENST00000453744 EYA1Q99502 592 aa16.33■□□□□ 0.2
UBE2D3-210ENST00000453744 EFCAB6Q5THR3 1501 aa16.32■□□□□ 0.2
UBE2D3-210ENST00000453744 AP5Z1O43299 807 aa16.32■□□□□ 0.2
UBE2D3-210ENST00000453744 ZNF75DP51815 510 aa16.32■□□□□ 0.2
UBE2D3-210ENST00000453744 NMIQ13287 307 aaPredicted RBP16.32■□□□□ 0.2
UBE2D3-210ENST00000453744 ZSCAN25Q6NSZ9 544 aa16.32■□□□□ 0.2
UBE2D3-210ENST00000453744 HYPKQ9NX55 129 aa16.32■□□□□ 0.2
UBE2D3-210ENST00000453744 BRF1Q92994 677 aa16.32■□□□□ 0.2
UBE2D3-210ENST00000453744 LSG1Q9H089 658 aaKnown RBP16.32■□□□□ 0.2
UBE2D3-210ENST00000453744 VGLL3A8MV65 326 aa16.31■□□□□ 0.2
UBE2D3-210ENST00000453744 ANKRD1Q15327 319 aa16.31■□□□□ 0.2
UBE2D3-210ENST00000453744 VPS53Q5VIR6 699 aa16.31■□□□□ 0.2
UBE2D3-210ENST00000453744 TMX1Q9H3N1 280 aa16.31■□□□□ 0.2
UBE2D3-210ENST00000453744 MRVI1Q9Y6F6 885 aa16.31■□□□□ 0.2
UBE2D3-210ENST00000453744 NR1I2O75469 434 aa16.31■□□□□ 0.2
UBE2D3-210ENST00000453744 NEUROD6Q96NK8 337 aa16.31■□□□□ 0.2
UBE2D3-210ENST00000453744 TPCN1Q9ULQ1 816 aa16.31■□□□□ 0.2
UBE2D3-210ENST00000453744 PAXBP1Q9Y5B6 917 aa16.31■□□□□ 0.2
UBE2D3-210ENST00000453744 ARID5BQ14865 1188 aa16.31■□□□□ 0.2
UBE2D3-210ENST00000453744 UTP14CQ5TAP6 766 aaKnown RBP16.31■□□□□ 0.2
UBE2D3-210ENST00000453744 KRT222Q8N1A0 295 aa16.31■□□□□ 0.2
UBE2D3-210ENST00000453744 ABTB2Q8N961 1025 aa16.31■□□□□ 0.2
UBE2D3-210ENST00000453744 FEZ1Q99689 392 aa16.31■□□□□ 0.2
UBE2D3-210ENST00000453744 JAK2O60674 1132 aa16.3■□□□□ 0.2
UBE2D3-210ENST00000453744 GLI2P10070 1586 aa16.3■□□□□ 0.2
UBE2D3-210ENST00000453744 ELF2Q15723 593 aa16.3■□□□□ 0.2
UBE2D3-210ENST00000453744 RIC3Q7Z5B4 369 aa16.3■□□□□ 0.2
UBE2D3-210ENST00000453744 CCDC69A6NI79 296 aa16.3■□□□□ 0.2
UBE2D3-210ENST00000453744 CCAR1Q8IX12 1150 aaKnown RBP16.3■□□□□ 0.2
UBE2D3-210ENST00000453744 CACTINQ8WUQ7 758 aaKnown RBP16.3■□□□□ 0.2
UBE2D3-210ENST00000453744 ZNF215Q9UL58 517 aaPredicted RBP16.3■□□□□ 0.2
UBE2D3-210ENST00000453744 CEP57L1Q8IYX8 460 aa16.3■□□□□ 0.2
UBE2D3-210ENST00000453744 STK11IPQ8N1F8 1099 aa16.3■□□□□ 0.2
UBE2D3-210ENST00000453744 CFAP45Q9UL16 551 aa16.3■□□□□ 0.2
UBE2D3-210ENST00000453744 NPHP3Q7Z494 1330 aa16.3■□□□□ 0.2
UBE2D3-210ENST00000453744 NCBP1Q09161 790 aaKnown RBP16.29■□□□□ 0.2
UBE2D3-210ENST00000453744 SPTLC3Q9NUV7 552 aa16.29■□□□□ 0.2
UBE2D3-210ENST00000453744 STAP2Q9UGK3 403 aa16.29■□□□□ 0.2
UBE2D3-210ENST00000453744 NDUFB9Q9Y6M9 179 aa16.29■□□□□ 0.2
UBE2D3-210ENST00000453744 LEO1Q8WVC0 666 aaPredicted RBP16.29■□□□□ 0.2
UBE2D3-210ENST00000453744 GTF3C6Q969F1 213 aa16.29■□□□□ 0.2
UBE2D3-210ENST00000453744 EVI5LQ96CN4 794 aa16.29■□□□□ 0.2
UBE2D3-210ENST00000453744 HDAC5Q9UQL6 1122 aa16.29■□□□□ 0.2
UBE2D3-210ENST00000453744 CWF19L2Q2TBE0 894 aaKnown RBP16.28■□□□□ 0.2
UBE2D3-210ENST00000453744 FSIP1Q8NA03 581 aa16.28■□□□□ 0.2
UBE2D3-210ENST00000453744 GTF2F1P35269 517 aaKnown RBP eCLIP16.28■□□□□ 0.27e-7■■■□□ 15.7
UBE2D3-210ENST00000453744 STK38Q15208 465 aa16.28■□□□□ 0.2
UBE2D3-210ENST00000453744 MPRIPQ6WCQ1 1025 aa16.28■□□□□ 0.2
UBE2D3-210ENST00000453744 AOPEPQ8N6M6 819 aa16.28■□□□□ 0.2
UBE2D3-210ENST00000453744 PDILTQ8N807 584 aa16.28■□□□□ 0.2
UBE2D3-210ENST00000453744 NAT10Q9H0A0 1025 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms