RNA–Protein interactions for RNA: ENST00000450829.5

TM9SF4-205, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-205ENST00000450829 RTN4Q9NQC3 1192 aaKnown RBP7.27□□□□□ -1.25
TM9SF4-205ENST00000450829 PDZRN3Q9UPQ7 1066 aa7.27□□□□□ -1.25
TM9SF4-205ENST00000450829 NUP98P52948 1817 aa7.27□□□□□ -1.25
TM9SF4-205ENST00000450829 BCORQ6W2J9 1755 aa7.26□□□□□ -1.25
TM9SF4-205ENST00000450829 YY1P25490 414 aa7.26□□□□□ -1.25
TM9SF4-205ENST00000450829 PDE4AP27815 886 aa7.26□□□□□ -1.25
TM9SF4-205ENST00000450829 RGS3P49796 1198 aa7.26□□□□□ -1.25
TM9SF4-205ENST00000450829 CCT4P50991 539 aaKnown RBP7.26□□□□□ -1.25
TM9SF4-205ENST00000450829 FKBP5Q13451 457 aaPredicted RBP7.26□□□□□ -1.25
TM9SF4-205ENST00000450829 NECTIN2Q92692 538 aa7.26□□□□□ -1.25
TM9SF4-205ENST00000450829 AKT1S1Q96B36 256 aa7.26□□□□□ -1.25
TM9SF4-205ENST00000450829 MTFR1LQ9H019 292 aa7.26□□□□□ -1.25
TM9SF4-205ENST00000450829 C1orf115Q9H7X2 142 aa7.26□□□□□ -1.25
TM9SF4-205ENST00000450829 C4BP0C0L5 1744 aa7.26□□□□□ -1.25
TM9SF4-205ENST00000450829 PNPLA7Q6ZV29 1317 aa7.26□□□□□ -1.25
TM9SF4-205ENST00000450829 LAMB2P55268 1798 aa7.25□□□□□ -1.25
TM9SF4-205ENST00000450829 ADCY9O60503 1353 aa7.25□□□□□ -1.25
TM9SF4-205ENST00000450829 F6X3S4 739 aa7.25□□□□□ -1.25
TM9SF4-205ENST00000450829 GIGYF1O75420 1035 aaPredicted RBP7.25□□□□□ -1.25
TM9SF4-205ENST00000450829 NKX1-1Q15270 411 aaPredicted RBP7.25□□□□□ -1.25
TM9SF4-205ENST00000450829 C8orf34Q49A92 452 aa7.25□□□□□ -1.25
TM9SF4-205ENST00000450829 ZNF790Q6PG37 636 aa7.25□□□□□ -1.25
TM9SF4-205ENST00000450829 HOMEZQ8IX15 550 aa7.25□□□□□ -1.25
TM9SF4-205ENST00000450829 ZCRB1Q8TBF4 217 aaKnown RBP7.25□□□□□ -1.25
TM9SF4-205ENST00000450829 DDX54Q8TDD1 881 aaKnown RBP7.25□□□□□ -1.25
TM9SF4-205ENST00000450829 MEIS3Q99687 375 aa7.25□□□□□ -1.25
TM9SF4-205ENST00000450829 FHDC1Q9C0D6 1143 aaPredicted RBP7.25□□□□□ -1.25
TM9SF4-205ENST00000450829 CHPF2Q9P2E5 772 aa7.25□□□□□ -1.25
TM9SF4-205ENST00000450829 IBTKQ9P2D0 1353 aaPredicted RBP7.24□□□□□ -1.25
TM9SF4-205ENST00000450829 PRIM1P49642 420 aaKnown RBP7.24□□□□□ -1.25
TM9SF4-205ENST00000450829 KCNQ4P56696 695 aa7.24□□□□□ -1.25
TM9SF4-205ENST00000450829 FAM161AQ3B820 660 aa7.24□□□□□ -1.25
TM9SF4-205ENST00000450829 SLC27A3Q5K4L6 730 aa7.24□□□□□ -1.25
TM9SF4-205ENST00000450829 CEP85Q6P2H3 762 aa7.24□□□□□ -1.25
TM9SF4-205ENST00000450829 SIRT2Q8IXJ6 389 aa7.24□□□□□ -1.25
TM9SF4-205ENST00000450829 ANKRD44Q8N8A2 993 aa7.24□□□□□ -1.25
TM9SF4-205ENST00000450829 GCC1Q96CN9 775 aa7.24□□□□□ -1.25
TM9SF4-205ENST00000450829 SYT17Q9BSW7 474 aa7.24□□□□□ -1.25
TM9SF4-205ENST00000450829 PHAXQ9H814 394 aaKnown RBP7.24□□□□□ -1.25
TM9SF4-205ENST00000450829 CEP350Q5VT06 3117 aa7.23□□□□□ -1.25
TM9SF4-205ENST00000450829 PRAMEF22A3QJZ6 481 aa7.23□□□□□ -1.25
TM9SF4-205ENST00000450829 EIF2S2P20042 333 aaKnown RBP7.23□□□□□ -1.25
TM9SF4-205ENST00000450829 NUCB1Q02818 461 aa7.23□□□□□ -1.25
TM9SF4-205ENST00000450829 SLC39A6Q13433 755 aa7.23□□□□□ -1.25
TM9SF4-205ENST00000450829 SLC4A10Q6U841 1118 aa7.23□□□□□ -1.25
TM9SF4-205ENST00000450829 NFATC2IPQ8NCF5 419 aa7.23□□□□□ -1.25
TM9SF4-205ENST00000450829 DBF4Q9UBU7 674 aaPredicted RBP7.23□□□□□ -1.25
TM9SF4-205ENST00000450829 KIAA1551Q9HCM1 1747 aa7.23□□□□□ -1.25
TM9SF4-205ENST00000450829 MYH14Q7Z406 1995 aaKnown RBP7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 ERVV-2B6SEH9 535 aa7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 ANXA1P04083 346 aa7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 GNAI3P08754 354 aa7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 CABP4P57796 275 aa7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 PROSER3Q2NL68 480 aa7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 RPAP2Q8IXW5 612 aaPredicted RBP7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 TTC5Q8N0Z6 440 aa7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 DNAAF4Q8WXU2 420 aa7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 SYTL4Q96C24 671 aaPredicted RBP7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 ZNF496Q96IT1 587 aaPredicted RBP7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 FMNL2Q96PY5 1086 aa7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 DDX21Q9NR30 783 aaKnown RBP eCLIP7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 ERBB4Q15303 1308 aa7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 KIF13BQ9NQT8 1826 aa7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 SCN7AQ01118 1682 aa7.22□□□□□ -1.25
TM9SF4-205ENST00000450829 PALLDQ8WX93 1383 aa7.21□□□□□ -1.25
TM9SF4-205ENST00000450829 C4AP0C0L4 1744 aa7.21□□□□□ -1.25
TM9SF4-205ENST00000450829 GNAI2P04899 355 aa7.21□□□□□ -1.26
TM9SF4-205ENST00000450829 SNRPA1P09661 255 aaKnown RBP7.21□□□□□ -1.26
TM9SF4-205ENST00000450829 PDIA6Q15084 440 aa7.21□□□□□ -1.26
TM9SF4-205ENST00000450829 CHD1LQ86WJ1 897 aa7.21□□□□□ -1.26
TM9SF4-205ENST00000450829 SRCIN1Q9C0H9 1055 aa7.21□□□□□ -1.26
TM9SF4-205ENST00000450829 HYPKQ9NX55 129 aa7.21□□□□□ -1.26
TM9SF4-205ENST00000450829 CCNL1Q9UK58 526 aaPredicted RBP7.21□□□□□ -1.26
TM9SF4-205ENST00000450829 SPEF2Q9C093 1822 aa7.21□□□□□ -1.26
TM9SF4-205ENST00000450829 BRCA1P38398 1863 aaKnown RBP7.2□□□□□ -1.26
TM9SF4-205ENST00000450829 PI4KAP2A4QPH2 592 aa7.2□□□□□ -1.26
TM9SF4-205ENST00000450829 HMMRO75330 724 aa7.2□□□□□ -1.26
TM9SF4-205ENST00000450829 ALDH1L1O75891 902 aa7.2□□□□□ -1.26
TM9SF4-205ENST00000450829 ANP32AP39687 249 aaKnown RBP7.2□□□□□ -1.26
TM9SF4-205ENST00000450829 BEND3Q5T5X7 828 aa7.2□□□□□ -1.26
TM9SF4-205ENST00000450829 LRP10Q7Z4F1 713 aa7.2□□□□□ -1.26
TM9SF4-205ENST00000450829 AMIGO3Q86WK7 504 aa7.2□□□□□ -1.26
TM9SF4-205ENST00000450829 PI4KAP1Q8N8J0 262 aa7.2□□□□□ -1.26
TM9SF4-205ENST00000450829 ZNF784Q8NCA9 323 aaPredicted RBP7.2□□□□□ -1.26
TM9SF4-205ENST00000450829 SLC16A10Q8TF71 515 aa7.2□□□□□ -1.26
TM9SF4-205ENST00000450829 LNPKQ9C0E8 428 aa7.2□□□□□ -1.26
TM9SF4-205ENST00000450829 DCTPP1Q9H773 170 aa7.2□□□□□ -1.26
TM9SF4-205ENST00000450829 A0A1B0GUL6 1792 aa7.2□□□□□ -1.26
TM9SF4-205ENST00000450829 MYH7P12883 1935 aa7.19□□□□□ -1.26
TM9SF4-205ENST00000450829 DDX60Q8IY21 1712 aaKnown RBP7.19□□□□□ -1.26
TM9SF4-205ENST00000450829 UBTFL1P0CB47 393 aaPredicted RBP7.19□□□□□ -1.26
TM9SF4-205ENST00000450829 KSR2Q6VAB6 950 aa7.19□□□□□ -1.26
TM9SF4-205ENST00000450829 CHRDL2Q6WN34 429 aa7.19□□□□□ -1.26
TM9SF4-205ENST00000450829 COL23A1Q86Y22 540 aaPredicted RBP7.19□□□□□ -1.26
TM9SF4-205ENST00000450829 NLGN2Q8NFZ4 835 aa7.19□□□□□ -1.26
TM9SF4-205ENST00000450829 USP44Q9H0E7 712 aa7.19□□□□□ -1.26
TM9SF4-205ENST00000450829 PODXL2Q9NZ53 605 aa7.19□□□□□ -1.26
TM9SF4-205ENST00000450829 TFCP2L1Q9NZI6 479 aa7.19□□□□□ -1.26
TM9SF4-205ENST00000450829 MAP3K2Q9Y2U5 619 aa7.19□□□□□ -1.26
TM9SF4-205ENST00000450829 ARAP2Q8WZ64 1704 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms