RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 GOLGA6L3A6NEY3 463 aa18.02■□□□□ 0.48
SF1-211ENST00000448404 TOM1L2Q6ZVM7 507 aa18.02■□□□□ 0.48
SF1-211ENST00000448404 HYPKQ9NX55 129 aa18.02■□□□□ 0.48
SF1-211ENST00000448404 DDX11L8A8MPP1 907 aa18.02■□□□□ 0.48
SF1-211ENST00000448404 TTC5Q8N0Z6 440 aa18.02■□□□□ 0.48
SF1-211ENST00000448404 GBP4Q96PP9 640 aa18.02■□□□□ 0.48
SF1-211ENST00000448404 PXDNLA1KZ92 1463 aa18.02■□□□□ 0.48
SF1-211ENST00000448404 CABP4P57796 275 aa18.02■□□□□ 0.47
SF1-211ENST00000448404 UBE3BQ7Z3V4 1068 aa18.02■□□□□ 0.47
SF1-211ENST00000448404 CADPS2Q86UW7 1296 aa18.02■□□□□ 0.47
SF1-211ENST00000448404 LINS1Q8NG48 757 aa18.02■□□□□ 0.47
SF1-211ENST00000448404 RAB11FIP3O75154 756 aa18.01■□□□□ 0.47
SF1-211ENST00000448404 PTH1RQ03431 593 aa18.01■□□□□ 0.47
SF1-211ENST00000448404 BOLA2Q9H3K6 86 aa18.01■□□□□ 0.47
SF1-211ENST00000448404 CIZ1Q9ULV3 898 aaPredicted RBP18.01■□□□□ 0.47
SF1-211ENST00000448404 SPATA31A3Q5VYP0 1347 aa18.01■□□□□ 0.47
SF1-211ENST00000448404 CLASRPQ8N2M8 674 aaKnown RBP18.01■□□□□ 0.47
SF1-211ENST00000448404 NCAPD2Q15021 1401 aa18.01■□□□□ 0.47
SF1-211ENST00000448404 NEURL1BA8MQ27 555 aa18■□□□□ 0.47
SF1-211ENST00000448404 IFIT2P09913 472 aaKnown RBP18■□□□□ 0.47
SF1-211ENST00000448404 FAM227BQ96M60 508 aa18■□□□□ 0.47
SF1-211ENST00000448404 CACNA1FO60840 1977 aa17.99■□□□□ 0.47
SF1-211ENST00000448404 A1BGP04217 495 aa17.99■□□□□ 0.47
SF1-211ENST00000448404 RBM27Q9P2N5 1060 aaKnown RBP17.99■□□□□ 0.47
SF1-211ENST00000448404 TTLL7Q6ZT98 887 aa17.99■□□□□ 0.47
SF1-211ENST00000448404 ANKRD13DQ6ZTN6 518 aa17.99■□□□□ 0.47
SF1-211ENST00000448404 FAM43AQ8N2R8 423 aa17.99■□□□□ 0.47
SF1-211ENST00000448404 GDPD2Q9HCC8 539 aa17.99■□□□□ 0.47
SF1-211ENST00000448404 NSFL1CQ9UNZ2 370 aaKnown RBP17.99■□□□□ 0.47
SF1-211ENST00000448404 DDX49Q9Y6V7 483 aaKnown RBP17.99■□□□□ 0.47
SF1-211ENST00000448404 SGSM2O43147 1006 aa17.98■□□□□ 0.47
SF1-211ENST00000448404 PRPF40AO75400 957 aaKnown RBP17.98■□□□□ 0.47
SF1-211ENST00000448404 GCKRQ14397 625 aa17.98■□□□□ 0.47
SF1-211ENST00000448404 TCEANC2Q96MN5 208 aa17.98■□□□□ 0.47
SF1-211ENST00000448404 CHMP3Q9Y3E7 222 aa17.98■□□□□ 0.47
SF1-211ENST00000448404 ALDH1L1O75891 902 aa17.98■□□□□ 0.47
SF1-211ENST00000448404 SLFNL1Q499Z3 407 aa17.98■□□□□ 0.47
SF1-211ENST00000448404 DNAJC5Q9H3Z4 198 aa17.98■□□□□ 0.47
SF1-211ENST00000448404 TAF6LQ9Y6J9 622 aa17.98■□□□□ 0.47
SF1-211ENST00000448404 FSD2A1L4K1 749 aa17.97■□□□□ 0.47
SF1-211ENST00000448404 NBPF26B4DH59 902 aa17.97■□□□□ 0.47
SF1-211ENST00000448404 DDX58O95786 925 aaKnown RBP17.97■□□□□ 0.47
SF1-211ENST00000448404 ADCK5Q3MIX3 580 aa17.97■□□□□ 0.47
SF1-211ENST00000448404 NBPF14Q5TI25 921 aa17.97■□□□□ 0.47
SF1-211ENST00000448404 NBPF10Q6P3W6 841 aaKnown RBP17.97■□□□□ 0.47
SF1-211ENST00000448404 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
SF1-211ENST00000448404 NBPF15Q8N660 670 aa17.97■□□□□ 0.47
SF1-211ENST00000448404 LARP1Q6PKG0 1096 aaKnown RBP17.97■□□□□ 0.47
SF1-211ENST00000448404 CNTROBQ8N137 903 aa17.97■□□□□ 0.47
SF1-211ENST00000448404 CCDC85AQ96PX6 553 aaPredicted RBP17.97■□□□□ 0.47
SF1-211ENST00000448404 ZBTB3Q9H5J0 574 aa17.97■□□□□ 0.47
SF1-211ENST00000448404 G3BP1Q13283 466 aaKnown RBP eCLIP17.96■□□□□ 0.475e-7■□□□□ 9.3
SF1-211ENST00000448404 TNS3Q68CZ2 1445 aa17.96■□□□□ 0.47
SF1-211ENST00000448404 LSG1Q9H089 658 aaKnown RBP17.96■□□□□ 0.47
SF1-211ENST00000448404 SNX14Q9Y5W7 946 aa17.96■□□□□ 0.47
SF1-211ENST00000448404 ALS2Q96Q42 1657 aa17.96■□□□□ 0.47
SF1-211ENST00000448404 SNRPA1P09661 255 aaKnown RBP17.96■□□□□ 0.47
SF1-211ENST00000448404 DCAF5Q96JK2 942 aa17.96■□□□□ 0.47
SF1-211ENST00000448404 DIAPH3Q9NSV4 1193 aa17.96■□□□□ 0.47
SF1-211ENST00000448404 ECHDC1Q9NTX5 307 aa17.96■□□□□ 0.47
SF1-211ENST00000448404 PHRF1Q9P1Y6 1649 aaKnown RBP17.96■□□□□ 0.47
SF1-211ENST00000448404 CYP2E1P05181 493 aaPredicted RBP17.96■□□□□ 0.46
SF1-211ENST00000448404 PRPF40BQ6NWY9 871 aaKnown RBP17.96■□□□□ 0.46
SF1-211ENST00000448404 CAVIN1Q6NZI2 390 aaKnown RBP17.96■□□□□ 0.46
SF1-211ENST00000448404 C5P01031 1676 aa17.95■□□□□ 0.46
SF1-211ENST00000448404 LARGE1O95461 756 aa17.95■□□□□ 0.46
SF1-211ENST00000448404 MCCP23508 829 aa17.95■□□□□ 0.46
SF1-211ENST00000448404 NEXNQ0ZGT2 675 aa17.95■□□□□ 0.46
SF1-211ENST00000448404 MTX1Q13505 466 aa17.95■□□□□ 0.46
SF1-211ENST00000448404 A0A087WZG4 1122 aa17.95■□□□□ 0.46
SF1-211ENST00000448404 METTL22Q9BUU2 404 aaPredicted RBP17.95■□□□□ 0.46
SF1-211ENST00000448404 HSPA4P34932 840 aa17.94■□□□□ 0.46
SF1-211ENST00000448404 KAT6BQ8WYB5 2073 aa17.94■□□□□ 0.46
SF1-211ENST00000448404 FMNL2Q96PY5 1086 aa17.94■□□□□ 0.46
SF1-211ENST00000448404 SLAIN2Q9P270 581 aa17.94■□□□□ 0.46
SF1-211ENST00000448404 TUBGCP6Q96RT7 1819 aa17.93■□□□□ 0.46
SF1-211ENST00000448404 GLRX3O76003 335 aaKnown RBP17.93■□□□□ 0.46
SF1-211ENST00000448404 TFCP2Q12800 502 aa17.93■□□□□ 0.46
SF1-211ENST00000448404 GRPEL1Q9HAV7 217 aa17.93■□□□□ 0.46
SF1-211ENST00000448404 LMBRD1Q9NUN5 540 aa17.93■□□□□ 0.46
SF1-211ENST00000448404 RAD50Q92878 1312 aa17.92■□□□□ 0.46
SF1-211ENST00000448404 A0A0D9SFI3 127 aa17.92■□□□□ 0.46
SF1-211ENST00000448404 NMIQ13287 307 aaPredicted RBP17.92■□□□□ 0.46
SF1-211ENST00000448404 CASTP20810 708 aaKnown RBP17.92■□□□□ 0.46
SF1-211ENST00000448404 AK2P54819 239 aa17.92■□□□□ 0.46
SF1-211ENST00000448404 ZCRB1Q8TBF4 217 aaKnown RBP17.92■□□□□ 0.46
SF1-211ENST00000448404 ZNF594Q96JF6 807 aaPredicted RBP17.92■□□□□ 0.46
SF1-211ENST00000448404 HSP90AB4PQ58FF6 505 aa17.91■□□□□ 0.46
SF1-211ENST00000448404 KIAA1211Q6ZU35 1233 aa17.91■□□□□ 0.46
SF1-211ENST00000448404 GPT2Q8TD30 523 aa17.91■□□□□ 0.46
SF1-211ENST00000448404 RRAGDQ9NQL2 400 aaPredicted RBP17.91■□□□□ 0.46
SF1-211ENST00000448404 NUCB2P80303 420 aa17.91■□□□□ 0.46
SF1-211ENST00000448404 LMBR1LQ6UX01 489 aa17.91■□□□□ 0.46
SF1-211ENST00000448404 PKNOX2Q96KN3 472 aa17.91■□□□□ 0.46
SF1-211ENST00000448404 SEC62Q99442 399 aaKnown RBP17.91■□□□□ 0.46
SF1-211ENST00000448404 CAMTA1Q9Y6Y1 1673 aa17.9■□□□□ 0.46
SF1-211ENST00000448404 CCDC129Q6ZRS4 1044 aa17.9■□□□□ 0.46
SF1-211ENST00000448404 RUFY3Q7L099 469 aa17.9■□□□□ 0.46
SF1-211ENST00000448404 ZNF589Q86UQ0 364 aaPredicted RBP17.9■□□□□ 0.46
SF1-211ENST00000448404 JAKMIP1Q96N16 626 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 752.2 ms