RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 LRP2BPQ9P2M1 347 aa13.62□□□□□ -0.23
PTCH1-208ENST00000430669 SLF2Q8IX21 1173 aa13.62□□□□□ -0.23
PTCH1-208ENST00000430669 SF3B2Q13435 895 aaKnown RBP13.62□□□□□ -0.23
PTCH1-208ENST00000430669 IFT172Q9UG01 1749 aa13.62□□□□□ -0.23
PTCH1-208ENST00000430669 CEP131Q9UPN4 1083 aa13.62□□□□□ -0.23
PTCH1-208ENST00000430669 AGLP35573 1532 aa13.61□□□□□ -0.23
PTCH1-208ENST00000430669 IGHDP01880 384 aa13.61□□□□□ -0.23
PTCH1-208ENST00000430669 CDC5LQ99459 802 aaKnown RBP13.61□□□□□ -0.23
PTCH1-208ENST00000430669 UBAC1Q9BSL1 405 aa13.61□□□□□ -0.23
PTCH1-208ENST00000430669 DIP2BQ9P265 1576 aa13.61□□□□□ -0.23
PTCH1-208ENST00000430669 MCM4P33991 863 aa13.61□□□□□ -0.23
PTCH1-208ENST00000430669 GCP02774 474 aa13.61□□□□□ -0.23
PTCH1-208ENST00000430669 HMGN5P82970 282 aaKnown RBP13.61□□□□□ -0.23
PTCH1-208ENST00000430669 IL2RBP14784 551 aa13.61□□□□□ -0.23
PTCH1-208ENST00000430669 STK38Q15208 465 aa13.6□□□□□ -0.23
PTCH1-208ENST00000430669 MTHFSDQ2M296 383 aaKnown RBP13.6□□□□□ -0.23
PTCH1-208ENST00000430669 NOL7Q9UMY1 257 aaKnown RBP13.6□□□□□ -0.23
PTCH1-208ENST00000430669 CEP89Q96ST8 783 aa13.6□□□□□ -0.23
PTCH1-208ENST00000430669 ZBTB40Q9NUA8 1239 aa13.6□□□□□ -0.23
PTCH1-208ENST00000430669 SMARCC1Q92922 1105 aaPredicted RBP13.6□□□□□ -0.23
PTCH1-208ENST00000430669 CDCA7Q9BWT1 371 aaPredicted RBP13.6□□□□□ -0.23
PTCH1-208ENST00000430669 RNF41Q9H4P4 317 aaPredicted RBP13.6□□□□□ -0.23
PTCH1-208ENST00000430669 C8orf58Q8NAV2 365 aa13.6□□□□□ -0.23
PTCH1-208ENST00000430669 CCDC43Q96MW1 224 aaKnown RBP13.59□□□□□ -0.23
PTCH1-208ENST00000430669 SMARCA5O60264 1052 aaPredicted RBP13.59□□□□□ -0.23
PTCH1-208ENST00000430669 LIMCH1Q9UPQ0 1083 aa13.59□□□□□ -0.23
PTCH1-208ENST00000430669 AOX1Q06278 1338 aa13.59□□□□□ -0.23
PTCH1-208ENST00000430669 FAM177BA6PVY3 158 aa13.59□□□□□ -0.23
PTCH1-208ENST00000430669 ATP8B2P98198 1209 aa13.59□□□□□ -0.23
PTCH1-208ENST00000430669 RRP12Q5JTH9 1297 aaKnown RBP13.59□□□□□ -0.23
PTCH1-208ENST00000430669 A2ML1A8K2U0 1454 aa13.59□□□□□ -0.23
PTCH1-208ENST00000430669 TULP4Q9NRJ4 1543 aa13.59□□□□□ -0.23
PTCH1-208ENST00000430669 RAD21O60216 631 aa13.59□□□□□ -0.23
PTCH1-208ENST00000430669 ZFYP08048 801 aaPredicted RBP13.59□□□□□ -0.23
PTCH1-208ENST00000430669 RIMS1Q86UR5 1692 aaKnown RBP13.59□□□□□ -0.23
PTCH1-208ENST00000430669 USP6P35125 1406 aa13.59□□□□□ -0.23
PTCH1-208ENST00000430669 EYA1Q99502 592 aa13.59□□□□□ -0.23
PTCH1-208ENST00000430669 TNMDQ9H2S6 317 aa13.58□□□□□ -0.23
PTCH1-208ENST00000430669 DCTPP1Q9H773 170 aa13.58□□□□□ -0.24
PTCH1-208ENST00000430669 TRMT112Q9UI30 125 aaKnown RBP13.58□□□□□ -0.24
PTCH1-208ENST00000430669 FIBPO43427 364 aa13.58□□□□□ -0.24
PTCH1-208ENST00000430669 TOM1O60784 492 aa13.58□□□□□ -0.24
PTCH1-208ENST00000430669 PCDHB15Q9Y5E8 787 aa13.58□□□□□ -0.24
PTCH1-208ENST00000430669 GPS2Q13227 327 aa13.58□□□□□ -0.24
PTCH1-208ENST00000430669 SPATA32Q96LK8 384 aa13.58□□□□□ -0.24
PTCH1-208ENST00000430669 BOLA2Q9H3K6 86 aa13.58□□□□□ -0.24
PTCH1-208ENST00000430669 NCKAP5LQ9HCH0 1330 aa13.58□□□□□ -0.24
PTCH1-208ENST00000430669 SCAND2PQ9GZW5 306 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-208ENST00000430669 FAM13BQ9NYF5 915 aa13.57□□□□□ -0.24
PTCH1-208ENST00000430669 UBE3BQ7Z3V4 1068 aa13.57□□□□□ -0.24
PTCH1-208ENST00000430669 SNX21Q969T3 373 aa13.57□□□□□ -0.24
PTCH1-208ENST00000430669 STIM1Q13586 685 aa13.57□□□□□ -0.24
PTCH1-208ENST00000430669 CCDC152Q4G0S7 254 aa13.57□□□□□ -0.24
PTCH1-208ENST00000430669 SMC5Q8IY18 1101 aa13.57□□□□□ -0.24
PTCH1-208ENST00000430669 FAM43AQ8N2R8 423 aa13.57□□□□□ -0.24
PTCH1-208ENST00000430669 TRIM35Q9UPQ4 493 aa13.57□□□□□ -0.24
PTCH1-208ENST00000430669 RNMTO43148 476 aaKnown RBP13.57□□□□□ -0.24
PTCH1-208ENST00000430669 PHACTR3Q96KR7 559 aa13.57□□□□□ -0.24
PTCH1-208ENST00000430669 TMEM131LA2VDJ0 1609 aa13.57□□□□□ -0.24
PTCH1-208ENST00000430669 FOSBP53539 338 aa13.57□□□□□ -0.24
PTCH1-208ENST00000430669 PCMTD1Q96MG8 357 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-208ENST00000430669 IDH1O75874 414 aaKnown RBP13.56□□□□□ -0.24
PTCH1-208ENST00000430669 ME1P48163 572 aa13.56□□□□□ -0.24
PTCH1-208ENST00000430669 FILIP1LQ4L180 1135 aa13.56□□□□□ -0.24
PTCH1-208ENST00000430669 LINS1Q8NG48 757 aa13.56□□□□□ -0.24
PTCH1-208ENST00000430669 NAPBQ9H115 298 aa13.56□□□□□ -0.24
PTCH1-208ENST00000430669 CDK5RAP3Q96JB5 506 aa13.56□□□□□ -0.24
PTCH1-208ENST00000430669 EPS15P42566 896 aa13.56□□□□□ -0.24
PTCH1-208ENST00000430669 LRRC59Q96AG4 307 aaKnown RBP13.56□□□□□ -0.24
PTCH1-208ENST00000430669 MEIS3Q99687 375 aa13.56□□□□□ -0.24
PTCH1-208ENST00000430669 RAI14Q9P0K7 980 aa13.56□□□□□ -0.24
PTCH1-208ENST00000430669 UQCRFS1P1P0C7P4 283 aa13.55□□□□□ -0.24
PTCH1-208ENST00000430669 SPTY2D1Q68D10 685 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-208ENST00000430669 CEP85Q6P2H3 762 aa13.55□□□□□ -0.24
PTCH1-208ENST00000430669 SMARCE1Q969G3 411 aa13.55□□□□□ -0.24
PTCH1-208ENST00000430669 MTERF4Q7Z6M4 381 aaKnown RBP13.55□□□□□ -0.24
PTCH1-208ENST00000430669 PHAXQ9H814 394 aaKnown RBP13.55□□□□□ -0.24
PTCH1-208ENST00000430669 NPHP4O75161 1426 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-208ENST00000430669 RHPN1Q8TCX5 695 aa13.55□□□□□ -0.24
PTCH1-208ENST00000430669 NGLY1Q96IV0 654 aa13.55□□□□□ -0.24
PTCH1-208ENST00000430669 ZNF213O14771 459 aa13.55□□□□□ -0.24
PTCH1-208ENST00000430669 FBLN1P23142 703 aa13.55□□□□□ -0.24
PTCH1-208ENST00000430669 PDE1AP54750 535 aa13.55□□□□□ -0.24
PTCH1-208ENST00000430669 TBC1D2Q9BYX2 928 aa13.55□□□□□ -0.24
PTCH1-208ENST00000430669 NYXQ9GZU5 481 aa13.55□□□□□ -0.24
PTCH1-208ENST00000430669 CHL1O00533 1208 aa13.55□□□□□ -0.24
PTCH1-208ENST00000430669 ZGPATQ8N5A5 531 aaKnown RBP13.55□□□□□ -0.24
PTCH1-208ENST00000430669 CTAGE5O15320 804 aa13.54□□□□□ -0.24
PTCH1-208ENST00000430669 RPGRQ92834 1020 aaKnown RBP13.54□□□□□ -0.24
PTCH1-208ENST00000430669 CBFA2T2O43439 604 aa13.54□□□□□ -0.24
PTCH1-208ENST00000430669 IL15P40933 162 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-208ENST00000430669 TXLNBQ8N3L3 684 aa13.54□□□□□ -0.24
PTCH1-208ENST00000430669 ADGRL3Q9HAR2 1447 aa13.54□□□□□ -0.24
PTCH1-208ENST00000430669 STK3Q13188 491 aa13.54□□□□□ -0.24
PTCH1-208ENST00000430669 HOMER1Q86YM7 354 aa13.54□□□□□ -0.24
PTCH1-208ENST00000430669 TRIM5Q9C035 493 aa13.54□□□□□ -0.24
PTCH1-208ENST00000430669 GRPEL1Q9HAV7 217 aa13.54□□□□□ -0.24
PTCH1-208ENST00000430669 ANKIB1Q9P2G1 1089 aa13.54□□□□□ -0.24
PTCH1-208ENST00000430669 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
PTCH1-208ENST00000430669 VIRMAQ69YN4 1812 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms