RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 SSH3Q8TE77 659 aa17.72■□□□□ 0.43
CALD1-207ENST00000430085 ASAP1Q9ULH1 1129 aa17.72■□□□□ 0.43
CALD1-207ENST00000430085 GRM8O00222 908 aa17.72■□□□□ 0.43
CALD1-207ENST00000430085 SRGAP3O43295 1099 aa17.72■□□□□ 0.43
CALD1-207ENST00000430085 SEC24BO95487 1268 aa17.72■□□□□ 0.43
CALD1-207ENST00000430085 PLEKHM2Q8IWE5 1019 aa17.72■□□□□ 0.43
CALD1-207ENST00000430085 MYD88Q99836 296 aa17.72■□□□□ 0.43
CALD1-207ENST00000430085 MSH5O43196 834 aa17.71■□□□□ 0.43
CALD1-207ENST00000430085 KRT27Q7Z3Y8 459 aa17.71■□□□□ 0.43
CALD1-207ENST00000430085 VSIG10Q8N0Z9 540 aa17.71■□□□□ 0.43
CALD1-207ENST00000430085 SYTL4Q96C24 671 aaPredicted RBP17.71■□□□□ 0.43
CALD1-207ENST00000430085 DDRGK1Q96HY6 314 aa17.71■□□□□ 0.43
CALD1-207ENST00000430085 TEX13AQ9BXU3 409 aaPredicted RBP17.71■□□□□ 0.43
CALD1-207ENST00000430085 LRRCC1Q9C099 1032 aa17.71■□□□□ 0.43
CALD1-207ENST00000430085 ATG3Q9NT62 314 aa17.71■□□□□ 0.43
CALD1-207ENST00000430085 BCL9O00512 1426 aa17.71■□□□□ 0.43
CALD1-207ENST00000430085 IBTKQ9P2D0 1353 aaPredicted RBP17.71■□□□□ 0.43
CALD1-207ENST00000430085 NBPF26B4DH59 902 aa17.7■□□□□ 0.42
CALD1-207ENST00000430085 IGKV5-2P06315 115 aa17.7■□□□□ 0.42
CALD1-207ENST00000430085 POLA2Q14181 598 aa17.7■□□□□ 0.42
CALD1-207ENST00000430085 FAM182BQ5T319 152 aa17.7■□□□□ 0.42
CALD1-207ENST00000430085 NBPF14Q5TI25 921 aa17.7■□□□□ 0.42
CALD1-207ENST00000430085 NBPF10Q6P3W6 841 aaKnown RBP17.7■□□□□ 0.42
CALD1-207ENST00000430085 ILDR2Q71H61 639 aa17.7■□□□□ 0.42
CALD1-207ENST00000430085 C16orf71Q8IYS4 520 aaPredicted RBP17.7■□□□□ 0.42
CALD1-207ENST00000430085 NBPF15Q8N660 670 aa17.7■□□□□ 0.42
CALD1-207ENST00000430085 PLBD2Q8NHP8 589 aa17.7■□□□□ 0.42
CALD1-207ENST00000430085 NEURL1BA8MQ27 555 aa17.7■□□□□ 0.42
CALD1-207ENST00000430085 A1BGP04217 495 aa17.7■□□□□ 0.42
CALD1-207ENST00000430085 RBM42Q9BTD8 480 aaKnown RBP17.7■□□□□ 0.42
CALD1-207ENST00000430085 UTYO14607 1347 aa17.69■□□□□ 0.42
CALD1-207ENST00000430085 MARCH10Q8NA82 808 aaPredicted RBP17.69■□□□□ 0.42
CALD1-207ENST00000430085 ARFGEF2Q9Y6D5 1785 aa17.69■□□□□ 0.42
CALD1-207ENST00000430085 SURF6O75683 361 aaKnown RBP17.68■□□□□ 0.42
CALD1-207ENST00000430085 GCKRQ14397 625 aa17.68■□□□□ 0.42
CALD1-207ENST00000430085 RAB11FIP3O75154 756 aa17.68■□□□□ 0.42
CALD1-207ENST00000430085 MTX1Q13505 466 aa17.68■□□□□ 0.42
CALD1-207ENST00000430085 ERICH6Q7L0X2 663 aa17.68■□□□□ 0.42
CALD1-207ENST00000430085 DOT1LQ8TEK3 1739 aa17.68■□□□□ 0.42
CALD1-207ENST00000430085 STARD3NLO95772 234 aa17.67■□□□□ 0.42
CALD1-207ENST00000430085 PRIM1P49642 420 aaKnown RBP17.67■□□□□ 0.42
CALD1-207ENST00000430085 TTC22Q5TAA0 569 aa17.67■□□□□ 0.42
CALD1-207ENST00000430085 OTUD7AQ8TE49 926 aaPredicted RBP17.67■□□□□ 0.42
CALD1-207ENST00000430085 HSP90AB4PQ58FF6 505 aa17.66■□□□□ 0.42
CALD1-207ENST00000430085 DNAJC10Q8IXB1 793 aa17.66■□□□□ 0.42
CALD1-207ENST00000430085 SUCLG2Q96I99 432 aa17.66■□□□□ 0.42
CALD1-207ENST00000430085 NOP58Q9Y2X3 529 aaKnown RBP17.66■□□□□ 0.42
CALD1-207ENST00000430085 AFDNP55196 1824 aaKnown RBP17.66■□□□□ 0.42
CALD1-207ENST00000430085 KAT6BQ8WYB5 2073 aa17.65■□□□□ 0.42
CALD1-207ENST00000430085 GSPT1P15170 499 aaKnown RBP17.65■□□□□ 0.42
CALD1-207ENST00000430085 TTLL7Q6ZT98 887 aa17.65■□□□□ 0.42
CALD1-207ENST00000430085 MFAP1P55081 439 aaKnown RBP17.64■□□□□ 0.42
CALD1-207ENST00000430085 SBF2Q86WG5 1849 aa17.64■□□□□ 0.42
CALD1-207ENST00000430085 ATP5J2-PTCD1G3V325 749 aa17.64■□□□□ 0.41
CALD1-207ENST00000430085 OS9Q13438 667 aaPredicted RBP17.64■□□□□ 0.41
CALD1-207ENST00000430085 BICC1Q9H694 974 aaKnown RBP17.64■□□□□ 0.41
CALD1-207ENST00000430085 ZNF330Q9Y3S2 320 aaPredicted RBP17.64■□□□□ 0.41
CALD1-207ENST00000430085 CDC45O75419 566 aa17.63■□□□□ 0.41
CALD1-207ENST00000430085 PDE1AP54750 535 aa17.63■□□□□ 0.41
CALD1-207ENST00000430085 KIF1BPQ96EK5 621 aa17.63■□□□□ 0.41
CALD1-207ENST00000430085 OSBPL3Q9H4L5 887 aa17.63■□□□□ 0.41
CALD1-207ENST00000430085 NUP188Q5SRE5 1749 aa17.63■□□□□ 0.41
CALD1-207ENST00000430085 RHPN1Q8TCX5 695 aa17.62■□□□□ 0.41
CALD1-207ENST00000430085 KAZALD1Q96I82 304 aa17.62■□□□□ 0.41
CALD1-207ENST00000430085 TBC1D32Q96NH3 1257 aa17.62■□□□□ 0.41
CALD1-207ENST00000430085 ZBTB3Q9H5J0 574 aa17.62■□□□□ 0.41
CALD1-207ENST00000430085 A0A087WZG4 1122 aa17.62■□□□□ 0.41
CALD1-207ENST00000430085 MX1P20591 662 aa17.62■□□□□ 0.41
CALD1-207ENST00000430085 KIF6Q6ZMV9 814 aa17.62■□□□□ 0.41
CALD1-207ENST00000430085 ACSBG1Q96GR2 724 aa17.62■□□□□ 0.41
CALD1-207ENST00000430085 TBC1D9Q6ZT07 1266 aa17.61■□□□□ 0.41
CALD1-207ENST00000430085 UBE3BQ7Z3V4 1068 aa17.61■□□□□ 0.41
CALD1-207ENST00000430085 IL1RAPL2Q9NP60 686 aa17.61■□□□□ 0.41
CALD1-207ENST00000430085 DAXXQ9UER7 740 aaPredicted RBP17.61■□□□□ 0.41
CALD1-207ENST00000430085 EIF5BO60841 1220 aaKnown RBP17.6■□□□□ 0.41
CALD1-207ENST00000430085 FAM196AQ6ZSG2 479 aa17.6■□□□□ 0.41
CALD1-207ENST00000430085 ERC1Q8IUD2 1116 aa17.6■□□□□ 0.41
CALD1-207ENST00000430085 CWC25Q9NXE8 425 aaPredicted RBP17.6■□□□□ 0.41
CALD1-207ENST00000430085 C22orf23Q9BZE7 217 aa17.6■□□□□ 0.41
CALD1-207ENST00000430085 SALL3Q9BXA9 1300 aa17.6■□□□□ 0.41
CALD1-207ENST00000430085 CYP19A1P11511 503 aaPredicted RBP17.59■□□□□ 0.41
CALD1-207ENST00000430085 SDSP20132 328 aa17.59■□□□□ 0.41
CALD1-207ENST00000430085 CASC1Q6TDU7 716 aa17.59■□□□□ 0.41
CALD1-207ENST00000430085 SLC4A9Q96Q91 983 aa17.59■□□□□ 0.41
CALD1-207ENST00000430085 NHSQ6T4R5 1651 aa17.59■□□□□ 0.41
CALD1-207ENST00000430085 CCDC191Q8NCU4 936 aa17.59■□□□□ 0.41
CALD1-207ENST00000430085 JARID2Q92833 1246 aaPredicted RBP17.59■□□□□ 0.41
CALD1-207ENST00000430085 ARXQ96QS3 562 aa17.59■□□□□ 0.41
CALD1-207ENST00000430085 COL15A1P39059 1388 aa17.58■□□□□ 0.41
CALD1-207ENST00000430085 STAP2Q9UGK3 403 aa17.58■□□□□ 0.4
CALD1-207ENST00000430085 PA2G4Q9UQ80 394 aaKnown RBP17.58■□□□□ 0.4
CALD1-207ENST00000430085 G3BP1Q13283 466 aaKnown RBP eCLIP17.57■□□□□ 0.48e-9■□□□□ 9.6
CALD1-207ENST00000430085 AOX1Q06278 1338 aa17.57■□□□□ 0.4
CALD1-207ENST00000430085 TJP1Q07157 1748 aa17.57■□□□□ 0.4
CALD1-207ENST00000430085 EPHA10Q5JZY3 1008 aa17.57■□□□□ 0.4
CALD1-207ENST00000430085 TSHZ3Q63HK5 1081 aa17.57■□□□□ 0.4
CALD1-207ENST00000430085 NUTM1Q86Y26 1132 aa17.57■□□□□ 0.4
CALD1-207ENST00000430085 CLASRPQ8N2M8 674 aaKnown RBP17.57■□□□□ 0.4
CALD1-207ENST00000430085 TNS1Q9HBL0 1735 aaKnown RBP17.56■□□□□ 0.4
CALD1-207ENST00000430085 H7C1W4 665 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms