RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 NEXNQ0ZGT2 675 aa27.56■■■□□ 2
VSX1-205ENST00000429762 NUP188Q5SRE5 1749 aa27.56■■■□□ 2
VSX1-205ENST00000429762 NEURL1BA8MQ27 555 aa27.55■■■□□ 2
VSX1-205ENST00000429762 ATP5J2-PTCD1G3V325 749 aa27.55■■■□□ 2
VSX1-205ENST00000429762 PLBD2Q8NHP8 589 aa27.55■■■□□ 2
VSX1-205ENST00000429762 ZBTB3Q9H5J0 574 aa27.55■■■□□ 2
VSX1-205ENST00000429762 ATRNO75882 1429 aa27.55■■■□□ 2
VSX1-205ENST00000429762 TEX13AQ9BXU3 409 aaPredicted RBP27.55■■■□□ 2
VSX1-205ENST00000429762 SMARCA5O60264 1052 aaPredicted RBP27.54■■■□□ 2
VSX1-205ENST00000429762 STARD3NLO95772 234 aa27.54■■■□□ 2
VSX1-205ENST00000429762 C8orf34Q49A92 452 aa27.54■■■□□ 2
VSX1-205ENST00000429762 JARID2Q92833 1246 aaPredicted RBP27.54■■■□□ 2
VSX1-205ENST00000429762 CYP19A1P11511 503 aaPredicted RBP27.53■■■□□ 2
VSX1-205ENST00000429762 PTF1AQ7RTS3 328 aa27.53■■■□□ 2
VSX1-205ENST00000429762 EXOC6BQ9Y2D4 811 aa27.53■■■□□ 2
VSX1-205ENST00000429762 GRM8O00222 908 aa27.53■■■□□ 2
VSX1-205ENST00000429762 FAM161AQ3B820 660 aa27.53■■■□□ 2
VSX1-205ENST00000429762 PPP1R42Q7Z4L9 355 aa27.52■■■□□ 2
VSX1-205ENST00000429762 TRPC5Q9UL62 973 aaPredicted RBP27.52■■■□□ 2
VSX1-205ENST00000429762 GCKRQ14397 625 aa27.51■■□□□ 1.99
VSX1-205ENST00000429762 SUCLG2Q96I99 432 aa27.51■■□□□ 1.99
VSX1-205ENST00000429762 ZBTB1Q9Y2K1 713 aa27.5■■□□□ 1.99
VSX1-205ENST00000429762 PALLDQ8WX93 1383 aa27.5■■□□□ 1.99
VSX1-205ENST00000429762 C16orf71Q8IYS4 520 aaPredicted RBP27.49■■□□□ 1.99
VSX1-205ENST00000429762 ARXQ96QS3 562 aa27.49■■□□□ 1.99
VSX1-205ENST00000429762 SRGAP3O43295 1099 aa27.48■■□□□ 1.99
VSX1-205ENST00000429762 ATP6V1AP38606 617 aa27.48■■□□□ 1.99
VSX1-205ENST00000429762 QTRT2Q9H974 415 aaKnown RBP27.48■■□□□ 1.99
VSX1-205ENST00000429762 UTYO14607 1347 aa27.48■■□□□ 1.99
VSX1-205ENST00000429762 LOC102724428A0A0B4J2F2 783 aa27.48■■□□□ 1.99
VSX1-205ENST00000429762 SIK1P57059 783 aa27.48■■□□□ 1.99
VSX1-205ENST00000429762 KAZALD1Q96I82 304 aa27.48■■□□□ 1.99
VSX1-205ENST00000429762 SSH3Q8TE77 659 aa27.47■■□□□ 1.99
VSX1-205ENST00000429762 ITPK1Q13572 414 aa27.46■■□□□ 1.99
VSX1-205ENST00000429762 SEPT12Q8IYM1 358 aa27.46■■□□□ 1.99
VSX1-205ENST00000429762 OTUD7AQ8TE49 926 aaPredicted RBP27.46■■□□□ 1.99
VSX1-205ENST00000429762 POLA2Q14181 598 aa27.46■■□□□ 1.99
VSX1-205ENST00000429762 BICC1Q9H694 974 aaKnown RBP27.45■■□□□ 1.98
VSX1-205ENST00000429762 ZBTB47Q9UFB7 747 aaPredicted RBP27.45■■□□□ 1.98
VSX1-205ENST00000429762 KCNQ4P56696 695 aa27.44■■□□□ 1.98
VSX1-205ENST00000429762 KIF6Q6ZMV9 814 aa27.44■■□□□ 1.98
VSX1-205ENST00000429762 UBE3BQ7Z3V4 1068 aa27.43■■□□□ 1.98
VSX1-205ENST00000429762 A0A087WZG4 1122 aa27.42■■□□□ 1.98
VSX1-205ENST00000429762 EPHA10Q5JZY3 1008 aa27.42■■□□□ 1.98
VSX1-205ENST00000429762 BTAF1O14981 1849 aa27.42■■□□□ 1.98
VSX1-205ENST00000429762 RTL5Q5HYW3 569 aaPredicted RBP27.42■■□□□ 1.98
VSX1-205ENST00000429762 SMARCC1Q92922 1105 aaPredicted RBP27.42■■□□□ 1.98
VSX1-205ENST00000429762 IBTKQ9P2D0 1353 aaPredicted RBP27.42■■□□□ 1.98
VSX1-205ENST00000429762 SURF6O75683 361 aaKnown RBP27.41■■□□□ 1.98
VSX1-205ENST00000429762 NPM2Q86SE8 214 aaKnown RBP27.41■■□□□ 1.98
VSX1-205ENST00000429762 NHSQ6T4R5 1651 aa27.41■■□□□ 1.98
VSX1-205ENST00000429762 ONECUT3O60422 494 aaPredicted RBP27.4■■□□□ 1.98
VSX1-205ENST00000429762 CRKLP46109 303 aaKnown RBP27.4■■□□□ 1.98
VSX1-205ENST00000429762 INTS5Q6P9B9 1019 aaKnown RBP27.4■■□□□ 1.98
VSX1-205ENST00000429762 PLEKHM2Q8IWE5 1019 aa27.4■■□□□ 1.98
VSX1-205ENST00000429762 HLFQ16534 295 aa27.39■■□□□ 1.98
VSX1-205ENST00000429762 CCDC87Q9NVE4 849 aa27.39■■□□□ 1.98
VSX1-205ENST00000429762 CWC25Q9NXE8 425 aaPredicted RBP27.39■■□□□ 1.98
VSX1-205ENST00000429762 PA2G4Q9UQ80 394 aaKnown RBP27.39■■□□□ 1.98
VSX1-205ENST00000429762 MTX1Q13505 466 aa27.39■■□□□ 1.97
VSX1-205ENST00000429762 TBC1D2BQ9UPU7 963 aa27.39■■□□□ 1.97
VSX1-205ENST00000429762 MAP3K15Q6ZN16 1313 aa27.38■■□□□ 1.97
VSX1-205ENST00000429762 MYH14Q7Z406 1995 aaKnown RBP27.38■■□□□ 1.97
VSX1-205ENST00000429762 LRRCC1Q9C099 1032 aa27.38■■□□□ 1.97
VSX1-205ENST00000429762 HDAC5Q9UQL6 1122 aa27.38■■□□□ 1.97
VSX1-205ENST00000429762 CASP7P55210 303 aa27.37■■□□□ 1.97
VSX1-205ENST00000429762 SEC24BO95487 1268 aa27.37■■□□□ 1.97
VSX1-205ENST00000429762 TCIRG1Q13488 830 aa27.37■■□□□ 1.97
VSX1-205ENST00000429762 SBF2Q86WG5 1849 aa27.36■■□□□ 1.97
VSX1-205ENST00000429762 CICQ96RK0 1608 aaPredicted RBP27.36■■□□□ 1.97
VSX1-205ENST00000429762 IL6STP40189 918 aaPredicted RBP27.36■■□□□ 1.97
VSX1-205ENST00000429762 ISCA1Q9BUE6 129 aa27.36■■□□□ 1.97
VSX1-205ENST00000429762 IL1RAPL2Q9NP60 686 aa27.36■■□□□ 1.97
VSX1-205ENST00000429762 COL5A3P25940 1745 aaPredicted RBP27.36■■□□□ 1.97
VSX1-205ENST00000429762 RREB1Q92766 1687 aa27.35■■□□□ 1.97
VSX1-205ENST00000429762 DZIP3Q86Y13 1208 aaKnown RBP27.35■■□□□ 1.97
VSX1-205ENST00000429762 LINC00116Q8NCU8 138 aa27.35■■□□□ 1.97
VSX1-205ENST00000429762 BRWD3Q6RI45 1802 aa27.35■■□□□ 1.97
VSX1-205ENST00000429762 H7C1W4 665 aa27.34■■□□□ 1.97
VSX1-205ENST00000429762 GPTP24298 496 aa27.34■■□□□ 1.97
VSX1-205ENST00000429762 CCDC191Q8NCU4 936 aa27.33■■□□□ 1.97
VSX1-205ENST00000429762 KLHDC4Q8TBB5 520 aa27.33■■□□□ 1.97
VSX1-205ENST00000429762 EIF5P55010 431 aaKnown RBP27.33■■□□□ 1.97
VSX1-205ENST00000429762 GIGYF2Q6Y7W6 1299 aaKnown RBP27.33■■□□□ 1.97
VSX1-205ENST00000429762 GSPT1P15170 499 aaKnown RBP27.32■■□□□ 1.96
VSX1-205ENST00000429762 OS9Q13438 667 aaPredicted RBP27.32■■□□□ 1.96
VSX1-205ENST00000429762 TSHZ3Q63HK5 1081 aa27.32■■□□□ 1.96
VSX1-205ENST00000429762 RHPN1Q8TCX5 695 aa27.31■■□□□ 1.96
VSX1-205ENST00000429762 NUP98P52948 1817 aa27.31■■□□□ 1.96
VSX1-205ENST00000429762 BMP2KLQ5H9B9 411 aa27.31■■□□□ 1.96
VSX1-205ENST00000429762 ANKRD36CQ5JPF3 1778 aa27.3■■□□□ 1.96
VSX1-205ENST00000429762 RAB11FIP3O75154 756 aa27.3■■□□□ 1.96
VSX1-205ENST00000429762 TTC22Q5TAA0 569 aa27.29■■□□□ 1.96
VSX1-205ENST00000429762 SMIM5Q71RC9 77 aa27.29■■□□□ 1.96
VSX1-205ENST00000429762 SIL1Q9H173 461 aa27.29■■□□□ 1.96
VSX1-205ENST00000429762 NOP58Q9Y2X3 529 aaKnown RBP27.29■■□□□ 1.96
VSX1-205ENST00000429762 ZNF831Q5JPB2 1677 aa27.29■■□□□ 1.96
VSX1-205ENST00000429762 FOXO4P98177 505 aa27.28■■□□□ 1.96
VSX1-205ENST00000429762 NUTM1Q86Y26 1132 aa27.28■■□□□ 1.96
VSX1-205ENST00000429762 LMBR1LQ6UX01 489 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms