RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 SETDB2Q96T68 719 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 TEX13AQ9BXU3 409 aaPredicted RBP3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 ZNF277Q9NRM2 450 aaPredicted RBP3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 TBC1D2BQ9UPU7 963 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 ZNF330Q9Y3S2 320 aaPredicted RBP3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 RGPD2P0DJD1 1756 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 PKD1L3Q7Z443 1732 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 BRCA1P38398 1863 aaKnown RBP3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 ITGB4P16144 1822 aa3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 MYH14Q7Z406 1995 aaKnown RBP3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 ZNF541Q9H0D2 1346 aa3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 SBF1O95248 1867 aa3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 NPR1P16066 1061 aa3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 ALDH1B1P30837 517 aa3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 IL6STP40189 918 aaPredicted RBP3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 IARSP41252 1262 aaKnown RBP3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 DGKZQ13574 1117 aa3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 PRPF38BQ5VTL8 546 aaKnown RBP3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 CC2D2BQ6DHV5 1058 aa3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 TPTE2Q6XPS3 522 aa3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 USP50Q70EL3 339 aaPredicted RBP3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 NBPF5PQ86XG9 351 aaPredicted RBP3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 SYNE4Q8N205 404 aa3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 LGR6Q9HBX8 967 aa3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 TSKSQ9UJT2 592 aa3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 GJA3Q9Y6H8 435 aa3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 TLL2Q9Y6L7 1015 aa3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 ZNF831Q5JPB2 1677 aa3.23□□□□□ -1.89
RNU4-53P-201ENST00000410828 KLRG2A4D1S0 409 aaPredicted RBP3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 TRAF5O00463 557 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 AOC2O75106 756 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 CAMTA2O94983 1202 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 CELF2O95319 508 aaKnown RBP3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 GTF2E1P29083 439 aaPredicted RBP3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 IL13P35225 146 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 EPS15P42566 896 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 SCNN1DP51172 638 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 BRPF1P55201 1214 aaPredicted RBP3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 FMR1Q06787 632 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 NOGQ13253 232 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 GRIPAP1Q4V328 841 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 CST9Q5W186 159 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 CLEC4GQ6UXB4 293 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 SAPCD2Q86UD0 394 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 MORC1Q86VD1 984 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 DZIP3Q86Y13 1208 aaKnown RBP3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 ZNF496Q96IT1 587 aaPredicted RBP3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 HHIPL1Q96JK4 782 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 PSMD1Q99460 953 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 POLR3GLQ9BT43 218 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 ZNF652Q9Y2D9 606 aa3.22□□□□□ -1.89
RNU4-53P-201ENST00000410828 A1BGP04217 495 aa3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 HMOX1P09601 288 aa3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 SOX10P56693 466 aa3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 TEFQ10587 303 aa3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 MTHFSDQ2M296 383 aaKnown RBP3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 CIAPIN1Q6FI81 312 aa3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 ZNF790Q6PG37 636 aa3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 OLFM4Q6UX06 510 aa3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 CDC37L1Q7L3B6 337 aa3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 NIM1KQ8IY84 436 aa3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 LARGE2Q8N3Y3 721 aa3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 ZC3H15Q8WU90 426 aaKnown RBP3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 GCC1Q96CN9 775 aa3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 FMNL2Q96PY5 1086 aa3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 TMX4Q9H1E5 349 aaPredicted RBP3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 PANK3Q9H999 370 aa3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 ADARB2Q9NS39 739 aaKnown RBP3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 NIP7Q9Y221 180 aaKnown RBP eCLIP3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 HEG1Q9ULI3 1381 aa3.21□□□□□ -1.9
RNU4-53P-201ENST00000410828 COL5A3P25940 1745 aaPredicted RBP3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 FAM177BA6PVY3 158 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 GNAT3A8MTJ3 354 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 RGL2O15211 777 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 PPIP5K2O43314 1243 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 HUNKP57058 714 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 CRY2Q49AN0 593 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 NBPF15Q8N660 670 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 GAS2L2Q8NHY3 880 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 RPGRQ92834 1020 aaKnown RBP3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 CCDC102AQ96A19 550 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 GLIS2Q9BZE0 524 aaPredicted RBP3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 VPS33BQ9H267 617 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 ZNF408Q9H9D4 720 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 SAGE1Q9NXZ1 904 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 GPRC5DQ9NZD1 345 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 PGAP2Q9UHJ9 254 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 KNSTRNQ9Y448 316 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 CUL9Q8IWT3 2517 aa3.2□□□□□ -1.9
RNU4-53P-201ENST00000410828 NRXN2Q9P2S2 1712 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 SCN4AP35499 1836 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 KIAA0100Q14667 2235 aaKnown RBP3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 BTBD11A6QL63 1104 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 H7C1D1 291 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 DIAPH1O60610 1272 aaKnown RBP3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 TRPA1O75762 1119 aa3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 SNRPA1P09661 255 aaKnown RBP3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 HOXA10P31260 410 aaPredicted RBP3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 PIP4K2AP48426 406 aaPredicted RBP3.19□□□□□ -1.9
RNU4-53P-201ENST00000410828 GMPSP49915 693 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms