RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 TATP17735 454 aaPredicted RBP5.17□□□□□ -1.58
RNU6-1140P-201ENST00000410517 CD97P48960 835 aa5.17□□□□□ -1.58
RNU6-1140P-201ENST00000410517 SKIV2LQ15477 1246 aaKnown RBP5.17□□□□□ -1.58
RNU6-1140P-201ENST00000410517 TNFRSF25Q93038 417 aa5.17□□□□□ -1.58
RNU6-1140P-201ENST00000410517 IREB2P48200 963 aaKnown RBP5.16□□□□□ -1.58
RNU6-1140P-201ENST00000410517 BRPF1P55201 1214 aaPredicted RBP5.16□□□□□ -1.58
RNU6-1140P-201ENST00000410517 SAMD5Q5TGI4 173 aa5.16□□□□□ -1.58
RNU6-1140P-201ENST00000410517 C20orf204Q6ZNR8 217 aa5.16□□□□□ -1.58
RNU6-1140P-201ENST00000410517 BICDL1Q6ZP65 573 aa5.16□□□□□ -1.58
RNU6-1140P-201ENST00000410517 WFDC12Q8WWY7 111 aa5.16□□□□□ -1.58
RNU6-1140P-201ENST00000410517 DDRGK1Q96HY6 314 aa5.16□□□□□ -1.58
RNU6-1140P-201ENST00000410517 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.16□□□□□ -1.58
RNU6-1140P-201ENST00000410517 GTF3C3Q9Y5Q9 886 aa5.16□□□□□ -1.58
RNU6-1140P-201ENST00000410517 FSTP19883 344 aa5.15□□□□□ -1.59
RNU6-1140P-201ENST00000410517 PRR23CQ6ZRP0 262 aa5.15□□□□□ -1.59
RNU6-1140P-201ENST00000410517 ZNF592Q92610 1267 aa5.15□□□□□ -1.59
RNU6-1140P-201ENST00000410517 SLC30A3Q99726 388 aa5.15□□□□□ -1.59
RNU6-1140P-201ENST00000410517 CCDC85AQ96PX6 553 aaPredicted RBP5.14□□□□□ -1.59
RNU6-1140P-201ENST00000410517 KRTAP4-5Q9BYR2 181 aa5.14□□□□□ -1.59
RNU6-1140P-201ENST00000410517 MED26O95402 600 aa5.13□□□□□ -1.59
RNU6-1140P-201ENST00000410517 NR1H3Q13133 447 aa5.13□□□□□ -1.59
RNU6-1140P-201ENST00000410517 NEUROD1Q13562 356 aa5.13□□□□□ -1.59
RNU6-1140P-201ENST00000410517 SLC51AQ86UW1 340 aa5.13□□□□□ -1.59
RNU6-1140P-201ENST00000410517 DMRTC2Q8IXT2 367 aaPredicted RBP5.13□□□□□ -1.59
RNU6-1140P-201ENST00000410517 FMR1NBQ8N0W7 255 aaPredicted RBP5.13□□□□□ -1.59
RNU6-1140P-201ENST00000410517 ZNF330Q9Y3S2 320 aaPredicted RBP5.13□□□□□ -1.59
RNU6-1140P-201ENST00000410517 NOS3P29474 1203 aa5.12□□□□□ -1.59
RNU6-1140P-201ENST00000410517 SFSWAPQ12872 951 aaKnown RBP5.12□□□□□ -1.59
RNU6-1140P-201ENST00000410517 LCE4AQ5TA78 99 aa5.12□□□□□ -1.59
RNU6-1140P-201ENST00000410517 RAB44Q7Z6P3 723 aaPredicted RBP5.12□□□□□ -1.59
RNU6-1140P-201ENST00000410517 JPH1Q9HDC5 661 aaPredicted RBP5.12□□□□□ -1.59
RNU6-1140P-201ENST00000410517 ZDHHC3Q9NYG2 299 aa5.12□□□□□ -1.59
RNU6-1140P-201ENST00000410517 TBC1D8BQ0IIM8 1120 aa5.11□□□□□ -1.59
RNU6-1140P-201ENST00000410517 SPEM2Q0P670 501 aa5.11□□□□□ -1.59
RNU6-1140P-201ENST00000410517 USP4Q13107 963 aa5.11□□□□□ -1.59
RNU6-1140P-201ENST00000410517 SH3D19Q5HYK7 790 aa5.11□□□□□ -1.59
RNU6-1140P-201ENST00000410517 LRRC69Q6ZNQ3 347 aa5.11□□□□□ -1.59
RNU6-1140P-201ENST00000410517 NUDT8Q8WV74 236 aa5.11□□□□□ -1.59
RNU6-1140P-201ENST00000410517 MEGF10Q96KG7 1140 aa5.11□□□□□ -1.59
RNU6-1140P-201ENST00000410517 SMTNP53814 917 aa5.1□□□□□ -1.59
RNU6-1140P-201ENST00000410517 KRTAP17-1Q9BYP8 105 aa5.1□□□□□ -1.59
RNU6-1140P-201ENST00000410517 KDM4CQ9H3R0 1056 aa5.1□□□□□ -1.59
RNU6-1140P-201ENST00000410517 CABP1Q9NZU7 370 aa5.1□□□□□ -1.59
RNU6-1140P-201ENST00000410517 KIAA1324LA8MWY0 1029 aaPredicted RBP5.09□□□□□ -1.59
RNU6-1140P-201ENST00000410517 ADAMTS4O75173 837 aa5.09□□□□□ -1.59
RNU6-1140P-201ENST00000410517 INHAP05111 366 aa5.09□□□□□ -1.59
RNU6-1140P-201ENST00000410517 GDF10P55107 478 aa5.09□□□□□ -1.59
RNU6-1140P-201ENST00000410517 TSGA10IPQ3SY00 556 aa5.09□□□□□ -1.59
RNU6-1140P-201ENST00000410517 IGFLR1Q9H665 355 aa5.09□□□□□ -1.59
RNU6-1140P-201ENST00000410517 NEUROD4Q9HD90 331 aa5.09□□□□□ -1.59
RNU6-1140P-201ENST00000410517 CEP126Q9P2H0 1117 aa5.09□□□□□ -1.59
RNU6-1140P-201ENST00000410517 SERTAD1Q9UHV2 236 aa5.09□□□□□ -1.59
RNU6-1140P-201ENST00000410517 PARP3Q9Y6F1 533 aa5.09□□□□□ -1.59
RNU6-1140P-201ENST00000410517 PTCD1O75127 700 aaKnown RBP5.08□□□□□ -1.6
RNU6-1140P-201ENST00000410517 TGFB1P01137 390 aa5.08□□□□□ -1.6
RNU6-1140P-201ENST00000410517 RFC5P40937 340 aa5.08□□□□□ -1.6
RNU6-1140P-201ENST00000410517 SCNN1DP51172 638 aa5.08□□□□□ -1.6
RNU6-1140P-201ENST00000410517 AFF1P51825 1210 aaKnown RBP5.08□□□□□ -1.6
RNU6-1140P-201ENST00000410517 OGFOD2Q6N063 350 aa5.08□□□□□ -1.6
RNU6-1140P-201ENST00000410517 C14orf37Q86TY3 774 aa5.08□□□□□ -1.6
RNU6-1140P-201ENST00000410517 ZNF295-AS1Q8N0V1 137 aa5.08□□□□□ -1.6
RNU6-1140P-201ENST00000410517 DOLKQ9UPQ8 538 aa5.08□□□□□ -1.6
RNU6-1140P-201ENST00000410517 C8AP07357 584 aa5.07□□□□□ -1.6
RNU6-1140P-201ENST00000410517 UBE2OQ9C0C9 1292 aaKnown RBP5.07□□□□□ -1.6
RNU6-1140P-201ENST00000410517 CDK2AP1O14519 115 aa5.06□□□□□ -1.6
RNU6-1140P-201ENST00000410517 TXLNAP40222 546 aa5.06□□□□□ -1.6
RNU6-1140P-201ENST00000410517 OXLD1Q5BKU9 147 aa5.06□□□□□ -1.6
RNU6-1140P-201ENST00000410517 FBXO11Q86XK2 927 aa5.06□□□□□ -1.6
RNU6-1140P-201ENST00000410517 GJD4Q96KN9 370 aaPredicted RBP5.06□□□□□ -1.6
RNU6-1140P-201ENST00000410517 SLC6A14Q9UN76 642 aa5.06□□□□□ -1.6
RNU6-1140P-201ENST00000410517 IQSEC3Q9UPP2 1182 aaPredicted RBP5.06□□□□□ -1.6
RNU6-1140P-201ENST00000410517 USP3Q9Y6I4 520 aa5.06□□□□□ -1.6
RNU6-1140P-201ENST00000410517 RGS9O75916 674 aaPredicted RBP5.05□□□□□ -1.6
RNU6-1140P-201ENST00000410517 PSAPL1Q6NUJ1 521 aa5.05□□□□□ -1.6
RNU6-1140P-201ENST00000410517 IGF2-ASQ6U949 168 aa5.05□□□□□ -1.6
RNU6-1140P-201ENST00000410517 BHMTQ93088 406 aa5.05□□□□□ -1.6
RNU6-1140P-201ENST00000410517 PCMTD1Q96MG8 357 aaPredicted RBP5.05□□□□□ -1.6
RNU6-1140P-201ENST00000410517 GOPCQ9HD26 462 aa5.05□□□□□ -1.6
RNU6-1140P-201ENST00000410517 A6NJY4 79 aa5.04□□□□□ -1.6
RNU6-1140P-201ENST00000410517 DZIP1LQ8IYY4 767 aaKnown RBP5.04□□□□□ -1.6
RNU6-1140P-201ENST00000410517 DTWD1Q8N5C7 304 aa5.04□□□□□ -1.6
RNU6-1140P-201ENST00000410517 SIRT1Q96EB6 747 aa5.04□□□□□ -1.6
RNU6-1140P-201ENST00000410517 GPBP1L1Q9HC44 474 aaPredicted RBP5.04□□□□□ -1.6
RNU6-1140P-201ENST00000410517 ADGRE2Q9UHX3 823 aa5.04□□□□□ -1.6
RNU6-1140P-201ENST00000410517 SOCS7O14512 581 aa5.03□□□□□ -1.6
RNU6-1140P-201ENST00000410517 GSC2O15499 205 aa5.03□□□□□ -1.6
RNU6-1140P-201ENST00000410517 WNT11O96014 354 aa5.03□□□□□ -1.6
RNU6-1140P-201ENST00000410517 IGLV1-40P01703 118 aa5.03□□□□□ -1.6
RNU6-1140P-201ENST00000410517 FLIIQ13045 1269 aa5.03□□□□□ -1.6
RNU6-1140P-201ENST00000410517 MSL1Q68DK7 614 aa5.03□□□□□ -1.6
RNU6-1140P-201ENST00000410517 ILDR2Q71H61 639 aa5.03□□□□□ -1.6
RNU6-1140P-201ENST00000410517 IL27Q8NEV9 243 aa5.03□□□□□ -1.6
RNU6-1140P-201ENST00000410517 CCER1Q8TC90 406 aaPredicted RBP5.03□□□□□ -1.6
RNU6-1140P-201ENST00000410517 CEP63Q96MT8 703 aa5.03□□□□□ -1.6
RNU6-1140P-201ENST00000410517 AKTIPQ9H8T0 292 aa5.03□□□□□ -1.6
RNU6-1140P-201ENST00000410517 ALX3O95076 343 aa5.02□□□□□ -1.61
RNU6-1140P-201ENST00000410517 SPINK2P20155 84 aa5.02□□□□□ -1.61
RNU6-1140P-201ENST00000410517 GRIK1P39086 918 aa5.02□□□□□ -1.61
RNU6-1140P-201ENST00000410517 MTFR1Q15390 333 aa5.02□□□□□ -1.61
RNU6-1140P-201ENST00000410517 TMEM259Q4ZIN3 620 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms