RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 KIAA2012Q0VF49 1180 aa16.77■□□□□ 0.28
NUP98-204ENST00000397004 CHPF2Q9P2E5 772 aa16.77■□□□□ 0.28
NUP98-204ENST00000397004 EIF2S2P20042 333 aaKnown RBP16.77■□□□□ 0.28
NUP98-204ENST00000397004 CASTP20810 708 aaKnown RBP16.77■□□□□ 0.28
NUP98-204ENST00000397004 NOLC1Q14978 699 aaKnown RBP eCLIP16.77■□□□□ 0.28
NUP98-204ENST00000397004 CCDC83Q8IWF9 413 aa16.77■□□□□ 0.28
NUP98-204ENST00000397004 LIMCH1Q9UPQ0 1083 aa16.77■□□□□ 0.28
NUP98-204ENST00000397004 TTC21AQ8NDW8 1320 aa16.77■□□□□ 0.28
NUP98-204ENST00000397004 PTMAP06454 111 aaKnown RBP16.77■□□□□ 0.27
NUP98-204ENST00000397004 ADCY9O60503 1353 aa16.77■□□□□ 0.27
NUP98-204ENST00000397004 PI4KAP2A4QPH2 592 aa16.77■□□□□ 0.27
NUP98-204ENST00000397004 FAM173BQ6P4H8 233 aa16.77■□□□□ 0.27
NUP98-204ENST00000397004 PI4KAP1Q8N8J0 262 aa16.77■□□□□ 0.27
NUP98-204ENST00000397004 AMOTL2Q9Y2J4 779 aa16.77■□□□□ 0.27
NUP98-204ENST00000397004 UBE2HP62256 183 aa16.76■□□□□ 0.27
NUP98-204ENST00000397004 ME3Q16798 604 aa16.76■□□□□ 0.27
NUP98-204ENST00000397004 NECAB1Q8N987 351 aa16.76■□□□□ 0.27
NUP98-204ENST00000397004 KDM4AO75164 1064 aa16.76■□□□□ 0.27
NUP98-204ENST00000397004 NLRP6P59044 892 aa16.76■□□□□ 0.27
NUP98-204ENST00000397004 MYRIPQ8NFW9 859 aa16.76■□□□□ 0.27
NUP98-204ENST00000397004 PYCARDQ9ULZ3 195 aa16.76■□□□□ 0.27
NUP98-204ENST00000397004 PA2G4Q9UQ80 394 aaKnown RBP16.76■□□□□ 0.27
NUP98-204ENST00000397004 GJB2P29033 226 aa16.75■□□□□ 0.27
NUP98-204ENST00000397004 SYAP1Q96A49 352 aaPredicted RBP16.75■□□□□ 0.27
NUP98-204ENST00000397004 CEMIPQ8WUJ3 1361 aa16.75■□□□□ 0.27
NUP98-204ENST00000397004 EIF4A1P60842 406 aaKnown RBP16.75■□□□□ 0.27
NUP98-204ENST00000397004 CHD2O14647 1828 aaKnown RBP16.75■□□□□ 0.27
NUP98-204ENST00000397004 EPB41L2O43491 1005 aaKnown RBP16.75■□□□□ 0.27
NUP98-204ENST00000397004 RAB11FIP3O75154 756 aa16.75■□□□□ 0.27
NUP98-204ENST00000397004 NGDNQ8NEJ9 315 aaKnown RBP16.74■□□□□ 0.27
NUP98-204ENST00000397004 KIF1BPQ96EK5 621 aa16.74■□□□□ 0.27
NUP98-204ENST00000397004 USP42Q9H9J4 1324 aaKnown RBP16.74■□□□□ 0.27
NUP98-204ENST00000397004 UVSSAQ2YD98 709 aa16.74■□□□□ 0.27
NUP98-204ENST00000397004 THEMISQ8N1K5 641 aaPredicted RBP16.74■□□□□ 0.27
NUP98-204ENST00000397004 SPTLC3Q9NUV7 552 aa16.74■□□□□ 0.27
NUP98-204ENST00000397004 PRPF40BQ6NWY9 871 aaKnown RBP16.74■□□□□ 0.27
NUP98-204ENST00000397004 TBX22Q9Y458 520 aa16.74■□□□□ 0.27
NUP98-204ENST00000397004 PRAMEF22A3QJZ6 481 aa16.73■□□□□ 0.27
NUP98-204ENST00000397004 PROSER3Q2NL68 480 aa16.73■□□□□ 0.27
NUP98-204ENST00000397004 TPCN1Q9ULQ1 816 aa16.73■□□□□ 0.27
NUP98-204ENST00000397004 NECTIN1Q15223 517 aa16.73■□□□□ 0.27
NUP98-204ENST00000397004 SETD1BQ9UPS6 1966 aaKnown RBP16.73■□□□□ 0.27
NUP98-204ENST00000397004 MED1Q15648 1581 aaPredicted RBP16.73■□□□□ 0.27
NUP98-204ENST00000397004 KCNB2Q92953 911 aa16.73■□□□□ 0.27
NUP98-204ENST00000397004 FAM227BQ96M60 508 aa16.72■□□□□ 0.27
NUP98-204ENST00000397004 ZSWIM6Q9HCJ5 1215 aa16.72■□□□□ 0.27
NUP98-204ENST00000397004 FAM184AQ8NB25 1140 aa16.72■□□□□ 0.27
NUP98-204ENST00000397004 KAZALD1Q96I82 304 aa16.72■□□□□ 0.27
NUP98-204ENST00000397004 TCEANC2Q96MN5 208 aa16.72■□□□□ 0.27
NUP98-204ENST00000397004 JAKMIP1Q96N16 626 aaKnown RBP16.72■□□□□ 0.27
NUP98-204ENST00000397004 TTC6Q86TZ1 520 aa16.72■□□□□ 0.27
NUP98-204ENST00000397004 SMC3Q9UQE7 1217 aa16.72■□□□□ 0.27
NUP98-204ENST00000397004 EID1Q9Y6B2 187 aa16.72■□□□□ 0.27
NUP98-204ENST00000397004 PHF14O94880 888 aa16.71■□□□□ 0.27
NUP98-204ENST00000397004 NBPF6Q5VWK0 638 aa16.71■□□□□ 0.27
NUP98-204ENST00000397004 CNTROBQ8N137 903 aa16.71■□□□□ 0.27
NUP98-204ENST00000397004 NBPF4Q96M43 638 aa16.71■□□□□ 0.27
NUP98-204ENST00000397004 PRDM10Q9NQV6 1147 aa16.71■□□□□ 0.27
NUP98-204ENST00000397004 LIG1P18858 919 aa16.71■□□□□ 0.27
NUP98-204ENST00000397004 CDC37L1Q7L3B6 337 aa16.71■□□□□ 0.27
NUP98-204ENST00000397004 DNAAF4Q8WXU2 420 aa16.71■□□□□ 0.27
NUP98-204ENST00000397004 TLR7Q9NYK1 1049 aaKnown RBP16.7■□□□□ 0.26
NUP98-204ENST00000397004 GTF2F1P35269 517 aaKnown RBP eCLIP16.7■□□□□ 0.26
NUP98-204ENST00000397004 KIAA1524Q8TCG1 905 aa16.7■□□□□ 0.26
NUP98-204ENST00000397004 KDM3BQ7LBC6 1761 aa16.7■□□□□ 0.26
NUP98-204ENST00000397004 CHGBP05060 677 aa16.69■□□□□ 0.26
NUP98-204ENST00000397004 CWF19L2Q2TBE0 894 aaKnown RBP16.69■□□□□ 0.26
NUP98-204ENST00000397004 FERMT3Q86UX7 667 aa16.69■□□□□ 0.26
NUP98-204ENST00000397004 PDRG1Q9NUG6 133 aa16.69■□□□□ 0.26
NUP98-204ENST00000397004 RGPD2P0DJD1 1756 aa16.69■□□□□ 0.26
NUP98-204ENST00000397004 VPS53Q5VIR6 699 aa16.69■□□□□ 0.26
NUP98-204ENST00000397004 CHMP3Q9Y3E7 222 aa16.69■□□□□ 0.26
NUP98-204ENST00000397004 SPC24Q8NBT2 197 aa16.68■□□□□ 0.26
NUP98-204ENST00000397004 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.68■□□□□ 0.26
NUP98-204ENST00000397004 SASH1O94885 1247 aa16.68■□□□□ 0.26
NUP98-204ENST00000397004 PLCB2Q00722 1185 aa16.68■□□□□ 0.26
NUP98-204ENST00000397004 NPHP4O75161 1426 aaPredicted RBP16.68■□□□□ 0.26
NUP98-204ENST00000397004 CAMK4Q16566 473 aa16.68■□□□□ 0.26
NUP98-204ENST00000397004 MAP7D2Q96T17 732 aa16.68■□□□□ 0.26
NUP98-204ENST00000397004 MTX1Q13505 466 aa16.67■□□□□ 0.26
NUP98-204ENST00000397004 DNTTIP2Q5QJE6 756 aaKnown RBP16.67■□□□□ 0.26
NUP98-204ENST00000397004 ATP2B3Q16720 1220 aa16.67■□□□□ 0.26
NUP98-204ENST00000397004 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
NUP98-204ENST00000397004 EAF2Q96CJ1 260 aaPredicted RBP16.67■□□□□ 0.26
NUP98-204ENST00000397004 BABAM1Q9NWV8 329 aa16.67■□□□□ 0.26
NUP98-204ENST00000397004 VPS37CA5D8V6 355 aaPredicted RBP16.67■□□□□ 0.26
NUP98-204ENST00000397004 MRVI1Q9Y6F6 885 aa16.67■□□□□ 0.26
NUP98-204ENST00000397004 COL15A1P39059 1388 aa16.67■□□□□ 0.26
NUP98-204ENST00000397004 GLRX3O76003 335 aaKnown RBP16.66■□□□□ 0.26
NUP98-204ENST00000397004 RBM8AQ9Y5S9 174 aaKnown RBP16.66■□□□□ 0.26
NUP98-204ENST00000397004 TTC41PQ6P2S7 1318 aa16.66■□□□□ 0.26
NUP98-204ENST00000397004 A0A0D9SFI3 127 aa16.66■□□□□ 0.26
NUP98-204ENST00000397004 HMGN5P82970 282 aaKnown RBP16.66■□□□□ 0.26
NUP98-204ENST00000397004 CREB3L3Q68CJ9 461 aa16.66■□□□□ 0.26
NUP98-204ENST00000397004 LUZP1Q86V48 1076 aa16.66■□□□□ 0.26
NUP98-204ENST00000397004 CCDC171Q6TFL3 1326 aa16.66■□□□□ 0.26
NUP98-204ENST00000397004 ABTB2Q8N961 1025 aa16.66■□□□□ 0.26
NUP98-204ENST00000397004 LRRC59Q96AG4 307 aaKnown RBP16.65■□□□□ 0.26
NUP98-204ENST00000397004 BCL2L12Q9HB09 334 aa16.65■□□□□ 0.26
NUP98-204ENST00000397004 DIAPH3Q9NSV4 1193 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms