RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 SLAIN2Q9P270 581 aa11.29□□□□□ -0.6
NDE1-201ENST00000396354 ERBB3P21860 1342 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 RNMTO43148 476 aaKnown RBP11.28□□□□□ -0.6
NDE1-201ENST00000396354 NBPF7P0C2Y1 421 aaPredicted RBP11.28□□□□□ -0.6
NDE1-201ENST00000396354 MX1P20591 662 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 KLHL40Q2TBA0 621 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 TCEANC2Q96MN5 208 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 LRRCC1Q9C099 1032 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 LMBRD1Q9NUN5 540 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 KIF1AQ12756 1690 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 MEGF6O75095 1541 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 FAM177BA6PVY3 158 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 NUCB2P80303 420 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 JARID2Q92833 1246 aaPredicted RBP11.28□□□□□ -0.6
NDE1-201ENST00000396354 ZDHHC9Q9Y397 364 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 C5P01031 1676 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 FIBPO43427 364 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 GADD45BO75293 160 aaPredicted RBP11.28□□□□□ -0.6
NDE1-201ENST00000396354 AIMP1Q12904 312 aaKnown RBP11.28□□□□□ -0.6
NDE1-201ENST00000396354 CHRNA2Q15822 529 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 AKAP4Q5JQC9 854 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 BRINP3Q76B58 766 aa11.28□□□□□ -0.6
NDE1-201ENST00000396354 C17orf53Q8N3J3 647 aaPredicted RBP11.28□□□□□ -0.6
NDE1-201ENST00000396354 ADAMTS7Q9UKP4 1686 aa11.27□□□□□ -0.6
NDE1-201ENST00000396354 BTBD11A6QL63 1104 aa11.27□□□□□ -0.61
NDE1-201ENST00000396354 KDM6AO15550 1401 aaPredicted RBP11.27□□□□□ -0.61
NDE1-201ENST00000396354 SRGAP3O43295 1099 aa11.26□□□□□ -0.61
NDE1-201ENST00000396354 UBTFL1P0CB47 393 aaPredicted RBP11.26□□□□□ -0.61
NDE1-201ENST00000396354 FOSBP53539 338 aa11.26□□□□□ -0.61
NDE1-201ENST00000396354 TSC1Q92574 1164 aa11.26□□□□□ -0.61
NDE1-201ENST00000396354 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
NDE1-201ENST00000396354 PXDNLA1KZ92 1463 aa11.26□□□□□ -0.61
NDE1-201ENST00000396354 PI4KAP2A4QPH2 592 aa11.26□□□□□ -0.61
NDE1-201ENST00000396354 KCNJ4P48050 445 aa11.26□□□□□ -0.61
NDE1-201ENST00000396354 SLC39A6Q13433 755 aa11.26□□□□□ -0.61
NDE1-201ENST00000396354 PI4KAP1Q8N8J0 262 aa11.26□□□□□ -0.61
NDE1-201ENST00000396354 SIL1Q9H173 461 aa11.26□□□□□ -0.61
NDE1-201ENST00000396354 PIP4K2AP48426 406 aaPredicted RBP11.26□□□□□ -0.61
NDE1-201ENST00000396354 IBTKQ9P2D0 1353 aaPredicted RBP11.25□□□□□ -0.61
NDE1-201ENST00000396354 HEG1Q9ULI3 1381 aa11.25□□□□□ -0.61
NDE1-201ENST00000396354 BEND3Q5T5X7 828 aa11.25□□□□□ -0.61
NDE1-201ENST00000396354 FERMT3Q86UX7 667 aa11.25□□□□□ -0.61
NDE1-201ENST00000396354 BABAM1Q9NWV8 329 aa11.25□□□□□ -0.61
NDE1-201ENST00000396354 ATP8B2P98198 1209 aa11.25□□□□□ -0.61
NDE1-201ENST00000396354 CCDC173Q0VFZ6 552 aa11.25□□□□□ -0.61
NDE1-201ENST00000396354 GIGYF1O75420 1035 aaPredicted RBP11.24□□□□□ -0.61
NDE1-201ENST00000396354 MCCP23508 829 aa11.24□□□□□ -0.61
NDE1-201ENST00000396354 TEFQ10587 303 aa11.24□□□□□ -0.61
NDE1-201ENST00000396354 PLEKHO1Q53GL0 409 aaPredicted RBP11.24□□□□□ -0.61
NDE1-201ENST00000396354 PA2G4Q9UQ80 394 aaKnown RBP11.24□□□□□ -0.61
NDE1-201ENST00000396354 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.24□□□□□ -0.61
NDE1-201ENST00000396354 SOS1Q07889 1333 aaPredicted RBP11.24□□□□□ -0.61
NDE1-201ENST00000396354 VPS37CA5D8V6 355 aaPredicted RBP11.24□□□□□ -0.61
NDE1-201ENST00000396354 PPP1R42Q7Z4L9 355 aa11.24□□□□□ -0.61
NDE1-201ENST00000396354 ESYT1Q9BSJ8 1104 aa11.24□□□□□ -0.61
NDE1-201ENST00000396354 ZSCAN30Q86W11 494 aa11.24□□□□□ -0.61
NDE1-201ENST00000396354 SCN11AQ9UI33 1791 aa11.23□□□□□ -0.61
NDE1-201ENST00000396354 FAM173BQ6P4H8 233 aa11.23□□□□□ -0.61
NDE1-201ENST00000396354 PDIA6Q15084 440 aa11.23□□□□□ -0.61
NDE1-201ENST00000396354 CWF19L2Q2TBE0 894 aaKnown RBP11.23□□□□□ -0.61
NDE1-201ENST00000396354 CNPY2Q9Y2B0 182 aa11.23□□□□□ -0.61
NDE1-201ENST00000396354 NPHP3Q7Z494 1330 aa11.23□□□□□ -0.61
NDE1-201ENST00000396354 GLI3P10071 1580 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 NLRP2Q9NX02 1062 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 PODXL2Q9NZ53 605 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 USP25Q9UHP3 1055 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 NDUFB9Q9Y6M9 179 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 GNAI3P08754 354 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 CHMLP26374 656 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 STK3Q13188 491 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 NECAB1Q8N987 351 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 PIP4K2BP78356 416 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 C1orf141Q5JVX7 400 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 SPC24Q8NBT2 197 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 KLHDC4Q8TBB5 520 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 SSH3Q8TE77 659 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 DNAAF4Q8WXU2 420 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 SRCIN1Q9C0H9 1055 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 OSBPL3Q9H4L5 887 aa11.22□□□□□ -0.61
NDE1-201ENST00000396354 NAP1L2Q9ULW6 460 aaPredicted RBP11.22□□□□□ -0.61
NDE1-201ENST00000396354 CAPN15O75808 1086 aa11.21□□□□□ -0.61
NDE1-201ENST00000396354 AMOTQ4VCS5 1084 aa11.21□□□□□ -0.61
NDE1-201ENST00000396354 CCDC83Q8IWF9 413 aa11.21□□□□□ -0.61
NDE1-201ENST00000396354 CYP27B1O15528 508 aa11.21□□□□□ -0.62
NDE1-201ENST00000396354 SPOCK2Q92563 424 aa11.21□□□□□ -0.62
NDE1-201ENST00000396354 FBXW7Q969H0 707 aa11.21□□□□□ -0.62
NDE1-201ENST00000396354 KAZALD1Q96I82 304 aa11.21□□□□□ -0.62
NDE1-201ENST00000396354 MAP3K2Q9Y2U5 619 aa11.21□□□□□ -0.62
NDE1-201ENST00000396354 TNS3Q68CZ2 1445 aa11.21□□□□□ -0.62
NDE1-201ENST00000396354 HCLS1P14317 486 aaPredicted RBP11.2□□□□□ -0.62
NDE1-201ENST00000396354 CASTP20810 708 aaKnown RBP11.2□□□□□ -0.62
NDE1-201ENST00000396354 USP48Q86UV5 1035 aa11.2□□□□□ -0.62
NDE1-201ENST00000396354 CAMK4Q16566 473 aa11.2□□□□□ -0.62
NDE1-201ENST00000396354 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
NDE1-201ENST00000396354 NFATC2IPQ8NCF5 419 aa11.2□□□□□ -0.62
NDE1-201ENST00000396354 BBXQ8WY36 941 aaPredicted RBP11.2□□□□□ -0.62
NDE1-201ENST00000396354 TTC12Q9H892 705 aaPredicted RBP11.2□□□□□ -0.62
NDE1-201ENST00000396354 OVOS2A0A0G2JMS6 1433 aa11.2□□□□□ -0.62
NDE1-201ENST00000396354 PHKG2P15735 406 aa11.2□□□□□ -0.62
NDE1-201ENST00000396354 PRPF40BQ6NWY9 871 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms