RNA–Protein interactions for RNA: ENST00000395035.3

CDKL4-202, Transcript of cyclin dependent kinase like 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKL4, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL4-202ENST00000395035 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.52□□□□□ -1.05
CDKL4-202ENST00000395035 C8orf37Q96NL8 207 aa8.52□□□□□ -1.05
CDKL4-202ENST00000395035 POLMQ9NP87 494 aaPredicted RBP8.52□□□□□ -1.05
CDKL4-202ENST00000395035 CYLDQ9NQC7 956 aa8.52□□□□□ -1.05
CDKL4-202ENST00000395035 RECKO95980 971 aa8.51□□□□□ -1.05
CDKL4-202ENST00000395035 FURINP09958 794 aa8.51□□□□□ -1.05
CDKL4-202ENST00000395035 ERVK-9P63128 1117 aa8.51□□□□□ -1.05
CDKL4-202ENST00000395035 RGL4Q8IZJ4 473 aa8.51□□□□□ -1.05
CDKL4-202ENST00000395035 NISCHQ9Y2I1 1504 aa8.5□□□□□ -1.05
CDKL4-202ENST00000395035 NPR3P17342 541 aa8.5□□□□□ -1.05
CDKL4-202ENST00000395035 NAA30Q147X3 362 aaPredicted RBP8.5□□□□□ -1.05
CDKL4-202ENST00000395035 EAPPQ56P03 285 aaPredicted RBP8.5□□□□□ -1.05
CDKL4-202ENST00000395035 GAS2L2Q8NHY3 880 aa8.5□□□□□ -1.05
CDKL4-202ENST00000395035 HELQQ8TDG4 1101 aa8.5□□□□□ -1.05
CDKL4-202ENST00000395035 ZNF358Q9NW07 568 aa8.5□□□□□ -1.05
CDKL4-202ENST00000395035 SENP3-EIF4A1A0A087X0R7 540 aa8.49□□□□□ -1.05
CDKL4-202ENST00000395035 MYCP01106 439 aaPredicted RBP8.49□□□□□ -1.05
CDKL4-202ENST00000395035 IGFBP4P22692 258 aa8.49□□□□□ -1.05
CDKL4-202ENST00000395035 RNF144AP50876 292 aaPredicted RBP8.49□□□□□ -1.05
CDKL4-202ENST00000395035 FOXO3O43524 673 aa8.48□□□□□ -1.05
CDKL4-202ENST00000395035 FAM13AO94988 1023 aa8.48□□□□□ -1.05
CDKL4-202ENST00000395035 CC2D2BQ6DHV5 1058 aa8.48□□□□□ -1.05
CDKL4-202ENST00000395035 DRC1Q96MC2 740 aa8.48□□□□□ -1.05
CDKL4-202ENST00000395035 TMEM229AB2RXF0 380 aa8.47□□□□□ -1.05
CDKL4-202ENST00000395035 GPC1P35052 558 aa8.47□□□□□ -1.05
CDKL4-202ENST00000395035 NEDD1Q8NHV4 660 aa8.47□□□□□ -1.05
CDKL4-202ENST00000395035 RBCK1Q9BYM8 510 aa8.47□□□□□ -1.05
CDKL4-202ENST00000395035 KRBA1A5PL33 1030 aa8.46□□□□□ -1.06
CDKL4-202ENST00000395035 BCRP11274 1271 aa8.46□□□□□ -1.06
CDKL4-202ENST00000395035 SCTRP47872 440 aa8.46□□□□□ -1.06
CDKL4-202ENST00000395035 ZC3H6P61129 1189 aaKnown RBP8.46□□□□□ -1.06
CDKL4-202ENST00000395035 TSNAXIP1Q2TAA8 658 aa8.46□□□□□ -1.06
CDKL4-202ENST00000395035 LYSMD3Q7Z3D4 306 aa8.46□□□□□ -1.06
CDKL4-202ENST00000395035 SREK1Q8WXA9 508 aaKnown RBP8.46□□□□□ -1.06
CDKL4-202ENST00000395035 BCL11AQ9H165 835 aa8.46□□□□□ -1.06
CDKL4-202ENST00000395035 P4HBP07237 508 aaKnown RBP8.45□□□□□ -1.06
CDKL4-202ENST00000395035 MRPL58Q14197 206 aaKnown RBP8.45□□□□□ -1.06
CDKL4-202ENST00000395035 TMC7Q7Z402 723 aa8.45□□□□□ -1.06
CDKL4-202ENST00000395035 SCG3Q8WXD2 468 aaKnown RBP8.45□□□□□ -1.06
CDKL4-202ENST00000395035 KRTAP9-9Q9BYP9 154 aa8.45□□□□□ -1.06
CDKL4-202ENST00000395035 KRTAP9-4Q9BYQ2 154 aa8.45□□□□□ -1.06
CDKL4-202ENST00000395035 MBIPQ9NS73 344 aa8.45□□□□□ -1.06
CDKL4-202ENST00000395035 ATAD2Q6PL18 1390 aa8.45□□□□□ -1.06
CDKL4-202ENST00000395035 A0A1W2PRU2 124 aa8.44□□□□□ -1.06
CDKL4-202ENST00000395035 CYP2U1Q7Z449 544 aa8.44□□□□□ -1.06
CDKL4-202ENST00000395035 TNS4Q8IZW8 715 aa8.44□□□□□ -1.06
CDKL4-202ENST00000395035 BACH2Q9BYV9 841 aa8.44□□□□□ -1.06
CDKL4-202ENST00000395035 CUEDC1Q9NWM3 386 aaPredicted RBP8.44□□□□□ -1.06
CDKL4-202ENST00000395035 WASLO00401 505 aaPredicted RBP8.43□□□□□ -1.06
CDKL4-202ENST00000395035 BACH1O14867 736 aa8.43□□□□□ -1.06
CDKL4-202ENST00000395035 MPSTP25325 297 aa8.43□□□□□ -1.06
CDKL4-202ENST00000395035 SCNN1DP51172 638 aa8.43□□□□□ -1.06
CDKL4-202ENST00000395035 OSBPL3Q9H4L5 887 aa8.43□□□□□ -1.06
CDKL4-202ENST00000395035 IGF1RP08069 1367 aa8.43□□□□□ -1.06
CDKL4-202ENST00000395035 TREHO43280 583 aa8.42□□□□□ -1.06
CDKL4-202ENST00000395035 NDUFB5O43674 189 aa8.42□□□□□ -1.06
CDKL4-202ENST00000395035 EPHA4P54764 986 aa8.42□□□□□ -1.06
CDKL4-202ENST00000395035 FMR1Q06787 632 aaKnown RBP eCLIP8.42□□□□□ -1.06
CDKL4-202ENST00000395035 CLN3Q13286 438 aa8.42□□□□□ -1.06
CDKL4-202ENST00000395035 NAALADL2Q58DX5 795 aa8.42□□□□□ -1.06
CDKL4-202ENST00000395035 PUS7Q96PZ0 661 aaKnown RBP8.42□□□□□ -1.06
CDKL4-202ENST00000395035 SAP130Q9H0E3 1048 aa8.42□□□□□ -1.06
CDKL4-202ENST00000395035 MEN1O00255 615 aa8.41□□□□□ -1.06
CDKL4-202ENST00000395035 STAU1O95793 577 aaKnown RBP8.41□□□□□ -1.06
CDKL4-202ENST00000395035 GDF10P55107 478 aa8.41□□□□□ -1.06
CDKL4-202ENST00000395035 PRICKLE2Q7Z3G6 844 aa8.41□□□□□ -1.06
CDKL4-202ENST00000395035 FAM177A1Q8N128 213 aaPredicted RBP8.41□□□□□ -1.06
CDKL4-202ENST00000395035 ACDQ96AP0 544 aa8.41□□□□□ -1.06
CDKL4-202ENST00000395035 CITED4Q96RK1 184 aa8.41□□□□□ -1.06
CDKL4-202ENST00000395035 GRIP2Q9C0E4 1043 aa8.41□□□□□ -1.06
CDKL4-202ENST00000395035 ESF1Q9H501 851 aaKnown RBP8.41□□□□□ -1.06
CDKL4-202ENST00000395035 BRPF3Q9ULD4 1205 aa8.41□□□□□ -1.06
CDKL4-202ENST00000395035 SCAMP3O14828 347 aaKnown RBP8.4□□□□□ -1.06
CDKL4-202ENST00000395035 HMGB1P09429 215 aaKnown RBP8.4□□□□□ -1.06
CDKL4-202ENST00000395035 DSC3Q14574 896 aa8.4□□□□□ -1.06
CDKL4-202ENST00000395035 LDLRAD1Q5T700 205 aa8.4□□□□□ -1.06
CDKL4-202ENST00000395035 C16orf46Q6P387 395 aa8.4□□□□□ -1.06
CDKL4-202ENST00000395035 VTI1AQ96AJ9 217 aa8.4□□□□□ -1.06
CDKL4-202ENST00000395035 TSPAN10Q9H1Z9 355 aaPredicted RBP8.4□□□□□ -1.06
CDKL4-202ENST00000395035 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.4□□□□□ -1.06
CDKL4-202ENST00000395035 BTBD11A6QL63 1104 aa8.39□□□□□ -1.07
CDKL4-202ENST00000395035 GNRH1P01148 92 aa8.39□□□□□ -1.07
CDKL4-202ENST00000395035 INHAP05111 366 aa8.39□□□□□ -1.07
CDKL4-202ENST00000395035 ITGB7P26010 798 aa8.39□□□□□ -1.07
CDKL4-202ENST00000395035 ERCC5P28715 1186 aaPredicted RBP8.39□□□□□ -1.07
CDKL4-202ENST00000395035 HDLBPQ00341 1268 aaKnown RBP8.39□□□□□ -1.07
CDKL4-202ENST00000395035 PLCB3Q01970 1234 aa8.39□□□□□ -1.07
CDKL4-202ENST00000395035 CHMP7Q8WUX9 453 aaPredicted RBP8.39□□□□□ -1.07
CDKL4-202ENST00000395035 GMCL1Q96IK5 515 aa8.39□□□□□ -1.07
CDKL4-202ENST00000395035 NLRP3Q96P20 1036 aa8.39□□□□□ -1.07
CDKL4-202ENST00000395035 SLC4A9Q96Q91 983 aa8.39□□□□□ -1.07
CDKL4-202ENST00000395035 LRRC4BQ9NT99 713 aa8.39□□□□□ -1.07
CDKL4-202ENST00000395035 SERTAD1Q9UHV2 236 aa8.39□□□□□ -1.07
CDKL4-202ENST00000395035 SPATA31C2B4DYI2 1134 aa8.38□□□□□ -1.07
CDKL4-202ENST00000395035 FZD6O60353 706 aa8.38□□□□□ -1.07
CDKL4-202ENST00000395035 RHOQP17081 205 aa8.38□□□□□ -1.07
CDKL4-202ENST00000395035 EIF1AXP47813 144 aaKnown RBP8.38□□□□□ -1.07
CDKL4-202ENST00000395035 WDR44Q5JSH3 913 aa8.38□□□□□ -1.07
CDKL4-202ENST00000395035 ALKBH2Q6NS38 261 aa8.38□□□□□ -1.07
CDKL4-202ENST00000395035 ALYREFQ86V81 257 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms