RNA–Protein interactions for RNA: ENST00000394987.4

C15orf39-202, Transcript of chromosome 15 open reading frame 39, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C15orf39, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf39-202ENST00000394987 CCDC47Q96A33 483 aaKnown RBP16.05■□□□□ 0.16
C15orf39-202ENST00000394987 TSPY26PQ9H489 355 aa16.05■□□□□ 0.16
C15orf39-202ENST00000394987 CWC22Q9HCG8 908 aaKnown RBP16.05■□□□□ 0.16
C15orf39-202ENST00000394987 SNRPA1P09661 255 aaKnown RBP16.05■□□□□ 0.16
C15orf39-202ENST00000394987 ANKIB1Q9P2G1 1089 aa16.05■□□□□ 0.16
C15orf39-202ENST00000394987 CCDC83Q8IWF9 413 aa16.04■□□□□ 0.16
C15orf39-202ENST00000394987 IQSEC3Q9UPP2 1182 aaPredicted RBP16.04■□□□□ 0.16
C15orf39-202ENST00000394987 HOOK1Q9UJC3 728 aaKnown RBP16.04■□□□□ 0.16
C15orf39-202ENST00000394987 TRIM35Q9UPQ4 493 aa16.04■□□□□ 0.16
C15orf39-202ENST00000394987 ZNF652Q9Y2D9 606 aa16.04■□□□□ 0.16
C15orf39-202ENST00000394987 RNF17Q9BXT8 1623 aaKnown RBP16.04■□□□□ 0.16
C15orf39-202ENST00000394987 VAMP4O75379 141 aa16.04■□□□□ 0.16
C15orf39-202ENST00000394987 UBAC1Q9BSL1 405 aa16.04■□□□□ 0.16
C15orf39-202ENST00000394987 PDCL3Q9H2J4 239 aa16.04■□□□□ 0.16
C15orf39-202ENST00000394987 KDM5AP29375 1690 aaKnown RBP16.04■□□□□ 0.16
C15orf39-202ENST00000394987 TTLL5Q6EMB2 1281 aa16.03■□□□□ 0.16
C15orf39-202ENST00000394987 IP6K1Q92551 441 aa16.03■□□□□ 0.16
C15orf39-202ENST00000394987 CCDC69A6NI79 296 aa16.03■□□□□ 0.16
C15orf39-202ENST00000394987 CGNQ9P2M7 1197 aaKnown RBP16.03■□□□□ 0.16
C15orf39-202ENST00000394987 INSRP06213 1382 aa16.03■□□□□ 0.16
C15orf39-202ENST00000394987 GOLIM4O00461 696 aa16.03■□□□□ 0.16
C15orf39-202ENST00000394987 DHX37Q8IY37 1157 aaKnown RBP16.03■□□□□ 0.16
C15orf39-202ENST00000394987 C16orf71Q8IYS4 520 aaPredicted RBP16.03■□□□□ 0.16
C15orf39-202ENST00000394987 ANKRD20A12PQ8NF67 263 aa16.03■□□□□ 0.16
C15orf39-202ENST00000394987 GDPD2Q9HCC8 539 aa16.03■□□□□ 0.16
C15orf39-202ENST00000394987 PLEKHG1Q9ULL1 1385 aa16.03■□□□□ 0.16
C15orf39-202ENST00000394987 TRIM22Q8IYM9 498 aa16.03■□□□□ 0.16
C15orf39-202ENST00000394987 PRR36Q9H6K5 1346 aa16.03■□□□□ 0.16
C15orf39-202ENST00000394987 SLC4A8Q2Y0W8 1093 aa16.02■□□□□ 0.16
C15orf39-202ENST00000394987 FAM177A1Q8N128 213 aaPredicted RBP16.02■□□□□ 0.16
C15orf39-202ENST00000394987 MNS1Q8NEH6 495 aa16.02■□□□□ 0.16
C15orf39-202ENST00000394987 RIMBP3CA6NJZ7 1639 aa16.02■□□□□ 0.15
C15orf39-202ENST00000394987 RIMBP3BA6NNM3 1639 aa16.02■□□□□ 0.15
C15orf39-202ENST00000394987 RAB11FIP3O75154 756 aa16.02■□□□□ 0.15
C15orf39-202ENST00000394987 CLCN1P35523 988 aa16.02■□□□□ 0.15
C15orf39-202ENST00000394987 GUCY1B3Q02153 619 aa16.02■□□□□ 0.15
C15orf39-202ENST00000394987 ZSCAN25Q6NSZ9 544 aa16.02■□□□□ 0.15
C15orf39-202ENST00000394987 RIMBP3Q9UFD9 1639 aa16.02■□□□□ 0.15
C15orf39-202ENST00000394987 PTPRCP08575 1304 aa16.01■□□□□ 0.15
C15orf39-202ENST00000394987 IPO7O95373 1038 aaKnown RBP16.01■□□□□ 0.15
C15orf39-202ENST00000394987 BRPF1P55201 1214 aaPredicted RBP16.01■□□□□ 0.15
C15orf39-202ENST00000394987 PA2G4Q9UQ80 394 aaKnown RBP16.01■□□□□ 0.15
C15orf39-202ENST00000394987 HAND2P61296 217 aa16.01■□□□□ 0.15
C15orf39-202ENST00000394987 CWF19L2Q2TBE0 894 aaKnown RBP16.01■□□□□ 0.15
C15orf39-202ENST00000394987 PDILTQ8N807 584 aa16.01■□□□□ 0.15
C15orf39-202ENST00000394987 ECHDC1Q9NTX5 307 aa16.01■□□□□ 0.15
C15orf39-202ENST00000394987 TBC1D9Q6ZT07 1266 aa16.01■□□□□ 0.15
C15orf39-202ENST00000394987 CTNNA3Q9UI47 895 aa16.01■□□□□ 0.15
C15orf39-202ENST00000394987 C6orf229H3BNL8 230 aa16■□□□□ 0.15
C15orf39-202ENST00000394987 DDX46Q7L014 1031 aaKnown RBP16■□□□□ 0.15
C15orf39-202ENST00000394987 RAB11FIP4Q86YS3 637 aa16■□□□□ 0.15
C15orf39-202ENST00000394987 ZBTB9Q96C00 473 aa16■□□□□ 0.15
C15orf39-202ENST00000394987 TCEANC2Q96MN5 208 aa16■□□□□ 0.15
C15orf39-202ENST00000394987 ZNF830Q96NB3 372 aaPredicted RBP16■□□□□ 0.15
C15orf39-202ENST00000394987 CWC25Q9NXE8 425 aaPredicted RBP16■□□□□ 0.15
C15orf39-202ENST00000394987 E9PCH4 1651 aa16■□□□□ 0.15
C15orf39-202ENST00000394987 ANKRD18BA2A2Z9 1011 aa16■□□□□ 0.15
C15orf39-202ENST00000394987 MBD3O95983 291 aa16■□□□□ 0.15
C15orf39-202ENST00000394987 RBM27Q9P2N5 1060 aaKnown RBP16■□□□□ 0.15
C15orf39-202ENST00000394987 AKAP2Q9Y2D5 859 aa16■□□□□ 0.15
C15orf39-202ENST00000394987 A2ML1A8K2U0 1454 aa16■□□□□ 0.15
C15orf39-202ENST00000394987 ANKRD1Q15327 319 aa16■□□□□ 0.15
C15orf39-202ENST00000394987 WDR33Q9C0J8 1336 aaKnown RBP16■□□□□ 0.15
C15orf39-202ENST00000394987 HMGN5P82970 282 aaKnown RBP15.99■□□□□ 0.15
C15orf39-202ENST00000394987 LMBR1LQ6UX01 489 aa15.99■□□□□ 0.15
C15orf39-202ENST00000394987 MRPL50Q8N5N7 158 aaKnown RBP15.99■□□□□ 0.15
C15orf39-202ENST00000394987 SPHKAPQ2M3C7 1700 aa15.99■□□□□ 0.15
C15orf39-202ENST00000394987 KRT85P78386 507 aa15.99■□□□□ 0.15
C15orf39-202ENST00000394987 IMMTQ16891 758 aaKnown RBP15.99■□□□□ 0.15
C15orf39-202ENST00000394987 CAVIN4Q5BKX8 364 aa15.99■□□□□ 0.15
C15orf39-202ENST00000394987 TEX35Q5T0J7 233 aa15.99■□□□□ 0.15
C15orf39-202ENST00000394987 HDAC1Q13547 482 aaPredicted RBP15.99■□□□□ 0.15
C15orf39-202ENST00000394987 NAPBQ9H115 298 aa15.99■□□□□ 0.15
C15orf39-202ENST00000394987 MAP3K4Q9Y6R4 1608 aa15.99■□□□□ 0.15
C15orf39-202ENST00000394987 TOM1O60784 492 aa15.99■□□□□ 0.15
C15orf39-202ENST00000394987 AKAP4Q5JQC9 854 aa15.99■□□□□ 0.15
C15orf39-202ENST00000394987 PHAXQ9H814 394 aaKnown RBP15.99■□□□□ 0.15
C15orf39-202ENST00000394987 SBNO1A3KN83 1393 aa15.99■□□□□ 0.15
C15orf39-202ENST00000394987 PDCL2Q8N4E4 241 aa15.98■□□□□ 0.15
C15orf39-202ENST00000394987 RHPN1Q8TCX5 695 aa15.98■□□□□ 0.15
C15orf39-202ENST00000394987 FILIP1Q7Z7B0 1213 aa15.98■□□□□ 0.15
C15orf39-202ENST00000394987 USP5P45974 858 aa15.98■□□□□ 0.15
C15orf39-202ENST00000394987 ZHX3Q9H4I2 956 aa15.98■□□□□ 0.15
C15orf39-202ENST00000394987 DDB1Q16531 1140 aa15.97■□□□□ 0.15
C15orf39-202ENST00000394987 CEP152O94986 1710 aa15.97■□□□□ 0.15
C15orf39-202ENST00000394987 CCT2P78371 535 aaKnown RBP15.97■□□□□ 0.15
C15orf39-202ENST00000394987 OLFM4Q6UX06 510 aa15.97■□□□□ 0.15
C15orf39-202ENST00000394987 TRPM1Q7Z4N2 1603 aa15.97■□□□□ 0.15
C15orf39-202ENST00000394987 PIK3R4Q99570 1358 aa15.97■□□□□ 0.15
C15orf39-202ENST00000394987 RANBP6O60518 1105 aaKnown RBP15.97■□□□□ 0.15
C15orf39-202ENST00000394987 NBPF6Q5VWK0 638 aa15.97■□□□□ 0.15
C15orf39-202ENST00000394987 NBPF4Q96M43 638 aa15.97■□□□□ 0.15
C15orf39-202ENST00000394987 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
C15orf39-202ENST00000394987 G2E3Q7L622 706 aa15.97■□□□□ 0.15
C15orf39-202ENST00000394987 ARHGAP45Q92619 1136 aa15.97■□□□□ 0.15
C15orf39-202ENST00000394987 ATP6V1AP38606 617 aa15.96■□□□□ 0.15
C15orf39-202ENST00000394987 HSP90AB3PQ58FF7 597 aa15.96■□□□□ 0.15
C15orf39-202ENST00000394987 BMP2KLQ5H9B9 411 aa15.96■□□□□ 0.15
C15orf39-202ENST00000394987 USP25Q9UHP3 1055 aa15.96■□□□□ 0.15
C15orf39-202ENST00000394987 ZNF521Q96K83 1311 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms