RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CLCN6P51797 869 aa8.88□□□□□ -0.99
VTI1A-201ENST00000393077 PKP1Q13835 747 aa8.88□□□□□ -0.99
VTI1A-201ENST00000393077 CKAP2LQ8IYA6 745 aa8.88□□□□□ -0.99
VTI1A-201ENST00000393077 N4BP2L2Q92802 583 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-201ENST00000393077 CEP89Q96ST8 783 aa8.88□□□□□ -0.99
VTI1A-201ENST00000393077 HMOX1P09601 288 aa8.88□□□□□ -0.99
VTI1A-201ENST00000393077 ZNF165P49910 485 aa8.88□□□□□ -0.99
VTI1A-201ENST00000393077 IRX1P78414 480 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-201ENST00000393077 ZKSCAN8Q15776 578 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-201ENST00000393077 POTEDQ86YR6 584 aa8.88□□□□□ -0.99
VTI1A-201ENST00000393077 NUP133Q8WUM0 1156 aa8.88□□□□□ -0.99
VTI1A-201ENST00000393077 RARSP54136 660 aaKnown RBP8.88□□□□□ -0.99
VTI1A-201ENST00000393077 SLFNL1Q499Z3 407 aa8.88□□□□□ -0.99
VTI1A-201ENST00000393077 NUTM2GQ5VZR2 741 aa8.88□□□□□ -0.99
VTI1A-201ENST00000393077 OTUD6BQ8N6M0 293 aa8.88□□□□□ -0.99
VTI1A-201ENST00000393077 GCC1Q96CN9 775 aa8.88□□□□□ -0.99
VTI1A-201ENST00000393077 ZCCHC17Q9NP64 241 aaKnown RBP8.88□□□□□ -0.99
VTI1A-201ENST00000393077 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.88□□□□□ -0.99
VTI1A-201ENST00000393077 ZNF518AQ6AHZ1 1483 aa8.88□□□□□ -0.99
VTI1A-201ENST00000393077 DIAPH1O60610 1272 aaKnown RBP8.87□□□□□ -0.99
VTI1A-201ENST00000393077 RLBP1P12271 317 aa8.87□□□□□ -0.99
VTI1A-201ENST00000393077 EVCP57679 992 aa8.87□□□□□ -0.99
VTI1A-201ENST00000393077 TADA2BQ86TJ2 420 aa8.87□□□□□ -0.99
VTI1A-201ENST00000393077 NBPF3Q9H094 633 aa8.87□□□□□ -0.99
VTI1A-201ENST00000393077 ODF2LQ9ULJ1 636 aa8.87□□□□□ -0.99
VTI1A-201ENST00000393077 PRAG1Q86YV5 1406 aa8.87□□□□□ -0.99
VTI1A-201ENST00000393077 GOLGA6L10A6NI86 522 aa8.87□□□□□ -0.99
VTI1A-201ENST00000393077 TTC19Q6DKK2 380 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-201ENST00000393077 CHAMP1Q96JM3 812 aa8.87□□□□□ -0.99
VTI1A-201ENST00000393077 ADAM21Q9UKJ8 722 aa8.87□□□□□ -0.99
VTI1A-201ENST00000393077 ANKRD36BQ8N2N9 1353 aa8.87□□□□□ -0.99
VTI1A-201ENST00000393077 GOLGA6L7A0A1B0GV03 622 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 GSDMDP57764 484 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 ZSCAN25Q6NSZ9 544 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 CHD1O14646 1710 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 ST5P78524 1137 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 CCDC70Q6NSX1 233 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 MICALCLQ6ZW33 695 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 TCP11L2Q8N4U5 519 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 RSRC1Q96IZ7 334 aaKnown RBP8.86□□□□□ -0.99
VTI1A-201ENST00000393077 TESK2Q96S53 571 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 ZSWIM4Q9H7M6 989 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 ZMYM3Q14202 1370 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 CCDC69A6NI79 296 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 CD2BP2O95400 341 aaKnown RBP8.86□□□□□ -0.99
VTI1A-201ENST00000393077 LUZP1Q86V48 1076 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 CTCFLQ8NI51 663 aaPredicted RBP8.86□□□□□ -0.99
VTI1A-201ENST00000393077 FMNL2Q96PY5 1086 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 CRACR2AQ9BSW2 395 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 TMX4Q9H1E5 349 aaPredicted RBP8.86□□□□□ -0.99
VTI1A-201ENST00000393077 FRMD3A2A2Y4 597 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 SRGAP3O43295 1099 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 ATP8B1O43520 1251 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 TUBB4AP04350 444 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 KRT85P78386 507 aa8.86□□□□□ -0.99
VTI1A-201ENST00000393077 CCDC97Q96F63 343 aaPredicted RBP8.86□□□□□ -0.99
VTI1A-201ENST00000393077 NSFL1CQ9UNZ2 370 aaKnown RBP8.86□□□□□ -0.99
VTI1A-201ENST00000393077 RILPL2Q969X0 211 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 C14orf93Q9H972 538 aaKnown RBP8.85□□□□□ -0.99
VTI1A-201ENST00000393077 LCMT1Q9UIC8 334 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 ELP1O95163 1332 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 ERC2O15083 957 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 MEX3CQ5U5Q3 659 aaKnown RBP8.85□□□□□ -0.99
VTI1A-201ENST00000393077 NAIF1Q69YI7 327 aaPredicted RBP8.85□□□□□ -0.99
VTI1A-201ENST00000393077 WWC2Q6AWC2 1192 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 CLEC17AQ6ZS10 378 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 PRPF38AQ8NAV1 312 aaKnown RBP8.85□□□□□ -0.99
VTI1A-201ENST00000393077 RUNDC1Q96C34 613 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 SH3GL3Q99963 347 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 GNL3LQ9NVN8 582 aaKnown RBP8.85□□□□□ -0.99
VTI1A-201ENST00000393077 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.85□□□□□ -0.995e-6■■■□□ 17
VTI1A-201ENST00000393077 TEX14Q8IWB6 1497 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 GADD45BO75293 160 aaPredicted RBP8.85□□□□□ -0.99
VTI1A-201ENST00000393077 SEC31AO94979 1220 aaKnown RBP8.85□□□□□ -0.99
VTI1A-201ENST00000393077 PSMD2Q13200 908 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 ANO6Q4KMQ2 910 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 PACS2Q86VP3 889 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 NUTM1Q86Y26 1132 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 ARMC2Q8NEN0 867 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 TMX3Q96JJ7 454 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 CNPY2Q9Y2B0 182 aa8.85□□□□□ -0.99
VTI1A-201ENST00000393077 RALGAPBQ86X10 1494 aa8.84□□□□□ -0.99
VTI1A-201ENST00000393077 CCDC73Q6ZRK6 1079 aa8.84□□□□□ -0.99
VTI1A-201ENST00000393077 CEP112Q8N8E3 955 aa8.84□□□□□ -0.99
VTI1A-201ENST00000393077 SCLT1Q96NL6 688 aa8.84□□□□□ -0.99
VTI1A-201ENST00000393077 CARD6Q9BX69 1037 aa8.84□□□□□ -0.99
VTI1A-201ENST00000393077 RBM6P78332 1123 aaKnown RBP8.84□□□□□ -0.99
VTI1A-201ENST00000393077 HDXQ7Z353 690 aa8.84□□□□□ -0.99
VTI1A-201ENST00000393077 PDILTQ8N807 584 aa8.84□□□□□ -0.99
VTI1A-201ENST00000393077 KIF1BPQ96EK5 621 aa8.84□□□□□ -0.99
VTI1A-201ENST00000393077 MRFAP1L1Q96HT8 127 aa8.84□□□□□ -0.99
VTI1A-201ENST00000393077 SGSM3Q96HU1 749 aa8.84□□□□□ -0.99
VTI1A-201ENST00000393077 CAPN7Q9Y6W3 813 aa8.84□□□□□ -0.99
VTI1A-201ENST00000393077 POTEB2H3BUK9 544 aa8.84□□□□□ -0.99
VTI1A-201ENST00000393077 ZSCAN12O43309 604 aa8.84□□□□□ -0.99
VTI1A-201ENST00000393077 ISM2Q6H9L7 571 aa8.84□□□□□ -0.99
VTI1A-201ENST00000393077 TYRO3Q06418 890 aa8.83□□□□□ -1
VTI1A-201ENST00000393077 HDAC1Q13547 482 aaPredicted RBP8.83□□□□□ -1
VTI1A-201ENST00000393077 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.83□□□□□ -1
VTI1A-201ENST00000393077 THEMISQ8N1K5 641 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms