RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 HDAC5Q9UQL6 1122 aa17.07■□□□□ 0.32
TNFRSF1B-201ENST00000376259 UHRF1BP1LA0JNW5 1464 aa17.07■□□□□ 0.32
TNFRSF1B-201ENST00000376259 A0A087WWV3 80 aa17.07■□□□□ 0.32
TNFRSF1B-201ENST00000376259 SGSM2O43147 1006 aa17.07■□□□□ 0.32
TNFRSF1B-201ENST00000376259 PHF8Q9UPP1 1060 aa17.07■□□□□ 0.32
TNFRSF1B-201ENST00000376259 ABCC3O15438 1527 aa17.07■□□□□ 0.32
TNFRSF1B-201ENST00000376259 HTATSF1O43719 755 aaKnown RBP17.06■□□□□ 0.32
TNFRSF1B-201ENST00000376259 CCDC73Q6ZRK6 1079 aa17.06■□□□□ 0.32
TNFRSF1B-201ENST00000376259 DBF4Q9UBU7 674 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1B-201ENST00000376259 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.06■□□□□ 0.32
TNFRSF1B-201ENST00000376259 V9GYY5 206 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1B-201ENST00000376259 MYOM1P52179 1685 aa17.06■□□□□ 0.32
TNFRSF1B-201ENST00000376259 PROSER3Q2NL68 480 aa17.06■□□□□ 0.32
TNFRSF1B-201ENST00000376259 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
TNFRSF1B-201ENST00000376259 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
TNFRSF1B-201ENST00000376259 KIF3AQ9Y496 699 aa17.06■□□□□ 0.32
TNFRSF1B-201ENST00000376259 CPLX1O14810 134 aa17.06■□□□□ 0.32
TNFRSF1B-201ENST00000376259 HAND2P61296 217 aa17.06■□□□□ 0.32
TNFRSF1B-201ENST00000376259 RUFY3Q7L099 469 aa17.06■□□□□ 0.32
TNFRSF1B-201ENST00000376259 PTCH1Q13635 1447 aa17.05■□□□□ 0.32
TNFRSF1B-201ENST00000376259 PNPLA6Q8IY17 1366 aa17.05■□□□□ 0.32
TNFRSF1B-201ENST00000376259 CCDC186Q7Z3E2 898 aa17.05■□□□□ 0.32
TNFRSF1B-201ENST00000376259 FLT4P35916 1363 aa17.05■□□□□ 0.32
TNFRSF1B-201ENST00000376259 PTGS1P23219 599 aa17.05■□□□□ 0.32
TNFRSF1B-201ENST00000376259 BIN1O00499 593 aa17.05■□□□□ 0.32
TNFRSF1B-201ENST00000376259 BRF1Q92994 677 aa17.05■□□□□ 0.32
TNFRSF1B-201ENST00000376259 CHMP4CQ96CF2 233 aa17.05■□□□□ 0.32
TNFRSF1B-201ENST00000376259 SETD1BQ9UPS6 1966 aaKnown RBP17.04■□□□□ 0.32
TNFRSF1B-201ENST00000376259 PDCP20941 246 aa17.04■□□□□ 0.32
TNFRSF1B-201ENST00000376259 ANAPC15P60006 121 aa17.04■□□□□ 0.32
TNFRSF1B-201ENST00000376259 HSP90AB3PQ58FF7 597 aa17.04■□□□□ 0.32
TNFRSF1B-201ENST00000376259 FAM177A1Q8N128 213 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1B-201ENST00000376259 CCAR2Q8N163 923 aaKnown RBP17.04■□□□□ 0.32
TNFRSF1B-201ENST00000376259 CHMP4AQ9BY43 222 aa17.04■□□□□ 0.32
TNFRSF1B-201ENST00000376259 DNAJC25Q9H1X3 360 aa17.04■□□□□ 0.32
TNFRSF1B-201ENST00000376259 ADGRB3O60242 1522 aa17.04■□□□□ 0.32
TNFRSF1B-201ENST00000376259 ROBO2Q9HCK4 1378 aa17.04■□□□□ 0.32
TNFRSF1B-201ENST00000376259 CHRNA2Q15822 529 aa17.04■□□□□ 0.32
TNFRSF1B-201ENST00000376259 ANO6Q4KMQ2 910 aa17.03■□□□□ 0.32
TNFRSF1B-201ENST00000376259 HSPA4P34932 840 aa17.03■□□□□ 0.32
TNFRSF1B-201ENST00000376259 CDC37L1Q7L3B6 337 aa17.03■□□□□ 0.32
TNFRSF1B-201ENST00000376259 COPS6Q7L5N1 327 aa17.03■□□□□ 0.32
TNFRSF1B-201ENST00000376259 BICC1Q9H694 974 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1B-201ENST00000376259 CREB3L3Q68CJ9 461 aa17.03■□□□□ 0.32
TNFRSF1B-201ENST00000376259 KINO60870 393 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1B-201ENST00000376259 SMC2O95347 1197 aa17.02■□□□□ 0.32
TNFRSF1B-201ENST00000376259 ZNF771Q7L3S4 317 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1B-201ENST00000376259 ERC1Q8IUD2 1116 aa17.02■□□□□ 0.32
TNFRSF1B-201ENST00000376259 THEMISQ8N1K5 641 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1B-201ENST00000376259 JAK2O60674 1132 aa17.02■□□□□ 0.32
TNFRSF1B-201ENST00000376259 ME3Q16798 604 aa17.02■□□□□ 0.32
TNFRSF1B-201ENST00000376259 LARP1Q6PKG0 1096 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1B-201ENST00000376259 HOMER1Q86YM7 354 aa17.02■□□□□ 0.32
TNFRSF1B-201ENST00000376259 INTS4Q96HW7 963 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1B-201ENST00000376259 MROH2AA6NES4 1674 aa17.02■□□□□ 0.32
TNFRSF1B-201ENST00000376259 ADGRB1O14514 1584 aa17.02■□□□□ 0.32
TNFRSF1B-201ENST00000376259 TNRQ92752 1358 aa17.02■□□□□ 0.31
TNFRSF1B-201ENST00000376259 GOLIM4O00461 696 aa17.02■□□□□ 0.31
TNFRSF1B-201ENST00000376259 LETM1O95202 739 aaPredicted RBP17.02■□□□□ 0.31
TNFRSF1B-201ENST00000376259 ZNF165P49910 485 aa17.02■□□□□ 0.31
TNFRSF1B-201ENST00000376259 PPP4R3BQ5MIZ7 849 aa17.02■□□□□ 0.31
TNFRSF1B-201ENST00000376259 CABLES1Q8TDN4 633 aa17.02■□□□□ 0.31
TNFRSF1B-201ENST00000376259 XAGE3Q8WTP9 111 aa17.02■□□□□ 0.31
TNFRSF1B-201ENST00000376259 SYTL4Q96C24 671 aaPredicted RBP17.02■□□□□ 0.31
TNFRSF1B-201ENST00000376259 TLR7Q9NYK1 1049 aaKnown RBP17.02■□□□□ 0.31
TNFRSF1B-201ENST00000376259 A0A087WZG4 1122 aa17.01■□□□□ 0.31
TNFRSF1B-201ENST00000376259 ZSCAN31Q96LW9 406 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1B-201ENST00000376259 RAD50Q92878 1312 aa17.01■□□□□ 0.31
TNFRSF1B-201ENST00000376259 POLR3DP05423 398 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1B-201ENST00000376259 EVI5LQ96CN4 794 aa17.01■□□□□ 0.31
TNFRSF1B-201ENST00000376259 SEC62Q99442 399 aaKnown RBP17.01■□□□□ 0.31
TNFRSF1B-201ENST00000376259 LIG1P18858 919 aa17■□□□□ 0.31
TNFRSF1B-201ENST00000376259 HSP90AA4PQ58FG1 418 aa17■□□□□ 0.31
TNFRSF1B-201ENST00000376259 PPP6R1Q9UPN7 881 aa17■□□□□ 0.31
TNFRSF1B-201ENST00000376259 ZBTB3Q9H5J0 574 aa17■□□□□ 0.31
TNFRSF1B-201ENST00000376259 KAT6BQ8WYB5 2073 aa17■□□□□ 0.31
TNFRSF1B-201ENST00000376259 GRM8O00222 908 aa17■□□□□ 0.31
TNFRSF1B-201ENST00000376259 HMGN5P82970 282 aaKnown RBP17■□□□□ 0.31
TNFRSF1B-201ENST00000376259 LRMPQ12912 555 aa17■□□□□ 0.31
TNFRSF1B-201ENST00000376259 PDCL2Q8N4E4 241 aa17■□□□□ 0.31
TNFRSF1B-201ENST00000376259 CCDC82Q8N4S0 544 aa16.99■□□□□ 0.31
TNFRSF1B-201ENST00000376259 NFATC2IPQ8NCF5 419 aa16.99■□□□□ 0.31
TNFRSF1B-201ENST00000376259 NRDCO43847 1150 aa16.99■□□□□ 0.31
TNFRSF1B-201ENST00000376259 CHGBP05060 677 aa16.99■□□□□ 0.31
TNFRSF1B-201ENST00000376259 EAF2Q96CJ1 260 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF1B-201ENST00000376259 MAP3K5Q99683 1374 aa16.99■□□□□ 0.31
TNFRSF1B-201ENST00000376259 IBTKQ9P2D0 1353 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF1B-201ENST00000376259 SLFNL1Q499Z3 407 aa16.99■□□□□ 0.31
TNFRSF1B-201ENST00000376259 SSH3Q8TE77 659 aa16.99■□□□□ 0.31
TNFRSF1B-201ENST00000376259 SUCLG2Q96I99 432 aa16.99■□□□□ 0.31
TNFRSF1B-201ENST00000376259 MLH3Q9UHC1 1453 aa16.99■□□□□ 0.31
TNFRSF1B-201ENST00000376259 A0A0D9SFI3 127 aa16.98■□□□□ 0.31
TNFRSF1B-201ENST00000376259 CYP2E1P05181 493 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1B-201ENST00000376259 TYRO3Q06418 890 aa16.98■□□□□ 0.31
TNFRSF1B-201ENST00000376259 ANKRD24Q8TF21 1146 aa16.98■□□□□ 0.31
TNFRSF1B-201ENST00000376259 MAP7D2Q96T17 732 aa16.98■□□□□ 0.31
TNFRSF1B-201ENST00000376259 TMX1Q9H3N1 280 aa16.98■□□□□ 0.31
TNFRSF1B-201ENST00000376259 NCOA5Q9HCD5 579 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1B-201ENST00000376259 CLIP2Q9UDT6 1046 aa16.98■□□□□ 0.31
TNFRSF1B-201ENST00000376259 TPCN1Q9ULQ1 816 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms