RNA–Protein interactions for RNA: ENST00000366997.8

LPGAT1-202, Transcript of lysophosphatidylglycerol acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPGAT1, Length 7,782 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPGAT1-202ENST00000366997 LIG1P18858 919 aa13.65□□□□□ -0.22
LPGAT1-202ENST00000366997 FLIIQ13045 1269 aa13.65□□□□□ -0.22
LPGAT1-202ENST00000366997 CACNA2D4Q7Z3S7 1137 aa13.65□□□□□ -0.22
LPGAT1-202ENST00000366997 RAB11FIP4Q86YS3 637 aa13.65□□□□□ -0.22
LPGAT1-202ENST00000366997 SKILP12757 684 aa13.65□□□□□ -0.23
LPGAT1-202ENST00000366997 DNM1Q05193 864 aaKnown RBP13.65□□□□□ -0.23
LPGAT1-202ENST00000366997 CCDC150Q8NCX0 1101 aa13.65□□□□□ -0.23
LPGAT1-202ENST00000366997 GBP2P32456 591 aaPredicted RBP13.64□□□□□ -0.23
LPGAT1-202ENST00000366997 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
LPGAT1-202ENST00000366997 SSRP1Q08945 709 aaKnown RBP13.64□□□□□ -0.23
LPGAT1-202ENST00000366997 CCDC94Q9BW85 323 aaPredicted RBP13.64□□□□□ -0.23
LPGAT1-202ENST00000366997 ABCF2Q9UG63 623 aa13.64□□□□□ -0.23
LPGAT1-202ENST00000366997 HSP90AA4PQ58FG1 418 aa13.64□□□□□ -0.23
LPGAT1-202ENST00000366997 FKBP15Q5T1M5 1219 aa13.64□□□□□ -0.23
LPGAT1-202ENST00000366997 LUZP1Q86V48 1076 aa13.64□□□□□ -0.23
LPGAT1-202ENST00000366997 USP5P45974 858 aa13.64□□□□□ -0.23
LPGAT1-202ENST00000366997 ZGPATQ8N5A5 531 aaKnown RBP13.64□□□□□ -0.23
LPGAT1-202ENST00000366997 SLC26A8Q96RN1 970 aa13.64□□□□□ -0.23
LPGAT1-202ENST00000366997 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
LPGAT1-202ENST00000366997 MAGI1Q96QZ7 1491 aaPredicted RBP13.64□□□□□ -0.23
LPGAT1-202ENST00000366997 DNAAF4Q8WXU2 420 aa13.63□□□□□ -0.23
LPGAT1-202ENST00000366997 GOLGA6L10A0A0M3HER8 536 aa13.63□□□□□ -0.23
LPGAT1-202ENST00000366997 UBASH3AP57075 661 aa13.63□□□□□ -0.23
LPGAT1-202ENST00000366997 SLC12A7Q9Y666 1083 aa13.63□□□□□ -0.23
LPGAT1-202ENST00000366997 RLBP1P12271 317 aa13.63□□□□□ -0.23
LPGAT1-202ENST00000366997 IFFO1Q0D2I5 559 aa13.63□□□□□ -0.23
LPGAT1-202ENST00000366997 TOM1L2Q6ZVM7 507 aa13.63□□□□□ -0.23
LPGAT1-202ENST00000366997 PPP1R42Q7Z4L9 355 aa13.63□□□□□ -0.23
LPGAT1-202ENST00000366997 FBLN1P23142 703 aa13.63□□□□□ -0.23
LPGAT1-202ENST00000366997 LARP1Q6PKG0 1096 aaKnown RBP13.63□□□□□ -0.23
LPGAT1-202ENST00000366997 MEIS3Q99687 375 aa13.63□□□□□ -0.23
LPGAT1-202ENST00000366997 NAPBQ9H115 298 aa13.63□□□□□ -0.23
LPGAT1-202ENST00000366997 DNAJC25Q9H1X3 360 aa13.63□□□□□ -0.23
LPGAT1-202ENST00000366997 NEK1Q96PY6 1258 aa13.63□□□□□ -0.23
LPGAT1-202ENST00000366997 POTEB2H3BUK9 544 aa13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 DNAI1Q9UI46 699 aa13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 YEATS4O95619 227 aa13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 ESYT1Q9BSJ8 1104 aa13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 PAFAH1B1P43034 410 aa13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 SSR1P43307 286 aaKnown RBP13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 TCEANC2Q96MN5 208 aa13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 ECHDC1Q9NTX5 307 aa13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 MCM6Q14566 821 aa13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 MAP3K2Q9Y2U5 619 aa13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 PTGS1P23219 599 aa13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 RBM25P49756 843 aaKnown RBP13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 INCENPQ9NQS7 918 aa13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 DACT1Q9NYF0 836 aa13.62□□□□□ -0.23
LPGAT1-202ENST00000366997 HAND2P61296 217 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 SMC5Q8IY18 1101 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 CNKSR2Q8WXI2 1034 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 LRRC2Q9BYS8 371 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 AKAP2Q9Y2D5 859 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 THOC2Q8NI27 1593 aaKnown RBP13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 RALGAPBQ86X10 1494 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 USO1O60763 962 aaKnown RBP13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 MATR3P43243 847 aaKnown RBP eCLIP13.61□□□□□ -0.233e-7■■■■■ 27.4
LPGAT1-202ENST00000366997 MICALCLQ6ZW33 695 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 USP16Q9Y5T5 823 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 GOLIM4O00461 696 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 ANKRD18AQ8IVF6 992 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 AOPEPQ8N6M6 819 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 ARFGAP3Q9NP61 516 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 GOLGA6L9A6NEM1 432 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 HLTFQ14527 1009 aaKnown RBP eCLIP13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 FAM200AQ8TCP9 573 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 FAM107BQ9H098 131 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 RAPGEF3O95398 923 aa13.61□□□□□ -0.23
LPGAT1-202ENST00000366997 GOLGA8AA7E2F4 631 aa13.6□□□□□ -0.23
LPGAT1-202ENST00000366997 PDE1AP54750 535 aa13.6□□□□□ -0.23
LPGAT1-202ENST00000366997 MPRIPQ6WCQ1 1025 aa13.6□□□□□ -0.23
LPGAT1-202ENST00000366997 ZSCAN16Q9H4T2 348 aaPredicted RBP13.6□□□□□ -0.23
LPGAT1-202ENST00000366997 JADE2Q9NQC1 790 aa13.6□□□□□ -0.23
LPGAT1-202ENST00000366997 IFIT3O14879 490 aaKnown RBP13.6□□□□□ -0.23
LPGAT1-202ENST00000366997 TDRD12Q587J7 1177 aaKnown RBP13.6□□□□□ -0.23
LPGAT1-202ENST00000366997 GTPBP4Q9BZE4 634 aaKnown RBP13.6□□□□□ -0.23
LPGAT1-202ENST00000366997 F13A1P00488 732 aa13.6□□□□□ -0.23
LPGAT1-202ENST00000366997 TYRO3Q06418 890 aa13.6□□□□□ -0.23
LPGAT1-202ENST00000366997 PLB1Q6P1J6 1458 aa13.6□□□□□ -0.23
LPGAT1-202ENST00000366997 IL16Q14005 1332 aa13.59□□□□□ -0.23
LPGAT1-202ENST00000366997 CFAP65Q6ZU64 1925 aaKnown RBP13.59□□□□□ -0.23
LPGAT1-202ENST00000366997 CCDC196A0A1B0GTZ2 297 aa13.59□□□□□ -0.23
LPGAT1-202ENST00000366997 ORC3Q9UBD5 711 aaPredicted RBP13.59□□□□□ -0.23
LPGAT1-202ENST00000366997 BIVM-ERCC5R4GMW8 1640 aa13.59□□□□□ -0.23
LPGAT1-202ENST00000366997 PARD3Q8TEW0 1356 aa13.59□□□□□ -0.23
LPGAT1-202ENST00000366997 CAVIN2O95810 425 aa13.59□□□□□ -0.23
LPGAT1-202ENST00000366997 HS1BP3Q53T59 392 aa13.59□□□□□ -0.23
LPGAT1-202ENST00000366997 BBXQ8WY36 941 aaPredicted RBP13.59□□□□□ -0.23
LPGAT1-202ENST00000366997 GTF2A1P52655 376 aaPredicted RBP13.59□□□□□ -0.23
LPGAT1-202ENST00000366997 TSG101Q99816 390 aa13.59□□□□□ -0.23
LPGAT1-202ENST00000366997 RBSNQ9H1K0 784 aa13.59□□□□□ -0.23
LPGAT1-202ENST00000366997 SYKP43405 635 aa13.59□□□□□ -0.23
LPGAT1-202ENST00000366997 SRRTQ9BXP5 876 aaKnown RBP13.58□□□□□ -0.23
LPGAT1-202ENST00000366997 RANBP6O60518 1105 aaKnown RBP13.58□□□□□ -0.24
LPGAT1-202ENST00000366997 PTCD1O75127 700 aaKnown RBP13.58□□□□□ -0.24
LPGAT1-202ENST00000366997 PTPRKQ15262 1439 aa13.58□□□□□ -0.24
LPGAT1-202ENST00000366997 CTTNBP2Q8WZ74 1663 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms