RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 ATP6V1DQ9Y5K8 247 aa16.93■□□□□ 0.3
RLIM-202ENST00000349225 AATKQ6ZMQ8 1374 aa16.93■□□□□ 0.3
RLIM-202ENST00000349225 VPS37CA5D8V6 355 aaPredicted RBP16.93■□□□□ 0.3
RLIM-202ENST00000349225 ADCK5Q3MIX3 580 aa16.93■□□□□ 0.3
RLIM-202ENST00000349225 MCM10Q7L590 875 aa16.93■□□□□ 0.3
RLIM-202ENST00000349225 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.93■□□□□ 0.3
RLIM-202ENST00000349225 FERMT3Q86UX7 667 aa16.93■□□□□ 0.3
RLIM-202ENST00000349225 CHL1O00533 1208 aa16.93■□□□□ 0.3
RLIM-202ENST00000349225 H2AFXP16104 143 aaPredicted RBP16.93■□□□□ 0.3
RLIM-202ENST00000349225 SLFNL1Q499Z3 407 aa16.93■□□□□ 0.3
RLIM-202ENST00000349225 RBM43Q6ZSC3 357 aaKnown RBP16.93■□□□□ 0.3
RLIM-202ENST00000349225 CDC37L1Q7L3B6 337 aa16.93■□□□□ 0.3
RLIM-202ENST00000349225 TRMT1Q9NXH9 659 aaKnown RBP16.93■□□□□ 0.3
RLIM-202ENST00000349225 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.93■□□□□ 0.3
RLIM-202ENST00000349225 SGSM2O43147 1006 aa16.92■□□□□ 0.3
RLIM-202ENST00000349225 RAD51AP2Q09MP3 1159 aa16.92■□□□□ 0.3
RLIM-202ENST00000349225 PIK3C2BO00750 1634 aa16.92■□□□□ 0.3
RLIM-202ENST00000349225 DIP2CQ9Y2E4 1556 aa16.92■□□□□ 0.3
RLIM-202ENST00000349225 ERO1AQ96HE7 468 aa16.92■□□□□ 0.3
RLIM-202ENST00000349225 NOL10Q9BSC4 688 aaKnown RBP16.92■□□□□ 0.3
RLIM-202ENST00000349225 PLA2G4AP47712 749 aa16.91■□□□□ 0.3
RLIM-202ENST00000349225 CCZ1BP86790 482 aa16.91■□□□□ 0.3
RLIM-202ENST00000349225 CCZ1P86791 482 aaPredicted RBP16.91■□□□□ 0.3
RLIM-202ENST00000349225 HDGFL2Q7Z4V5 671 aaPredicted RBP16.91■□□□□ 0.3
RLIM-202ENST00000349225 IL1RAPL2Q9NP60 686 aa16.91■□□□□ 0.3
RLIM-202ENST00000349225 TTC21AQ8NDW8 1320 aa16.91■□□□□ 0.3
RLIM-202ENST00000349225 NUTM1Q86Y26 1132 aa16.91■□□□□ 0.3
RLIM-202ENST00000349225 AEBP1Q8IUX7 1158 aa16.91■□□□□ 0.3
RLIM-202ENST00000349225 NECAB1Q8N987 351 aa16.91■□□□□ 0.3
RLIM-202ENST00000349225 TNMDQ9H2S6 317 aa16.91■□□□□ 0.3
RLIM-202ENST00000349225 CASTP20810 708 aaKnown RBP16.91■□□□□ 0.3
RLIM-202ENST00000349225 ERCC6LQ2NKX8 1250 aa16.91■□□□□ 0.3
RLIM-202ENST00000349225 DDX54Q8TDD1 881 aaKnown RBP16.91■□□□□ 0.3
RLIM-202ENST00000349225 CDK19Q9BWU1 502 aa16.91■□□□□ 0.3
RLIM-202ENST00000349225 MIS18AQ9NYP9 233 aa16.91■□□□□ 0.3
RLIM-202ENST00000349225 NR1I2O75469 434 aa16.9■□□□□ 0.3
RLIM-202ENST00000349225 LMOD3Q0VAK6 560 aa16.9■□□□□ 0.3
RLIM-202ENST00000349225 PTPN14Q15678 1187 aa16.9■□□□□ 0.3
RLIM-202ENST00000349225 SYTL4Q96C24 671 aaPredicted RBP16.9■□□□□ 0.3
RLIM-202ENST00000349225 SPG7Q9UQ90 795 aa16.9■□□□□ 0.3
RLIM-202ENST00000349225 ZNF165P49910 485 aa16.9■□□□□ 0.3
RLIM-202ENST00000349225 ME3Q16798 604 aa16.9■□□□□ 0.3
RLIM-202ENST00000349225 ZBTB9Q96C00 473 aa16.9■□□□□ 0.3
RLIM-202ENST00000349225 GNAI2P04899 355 aa16.89■□□□□ 0.29
RLIM-202ENST00000349225 RRS1Q15050 365 aaKnown RBP16.89■□□□□ 0.29
RLIM-202ENST00000349225 PI4K2BQ8TCG2 481 aa16.89■□□□□ 0.29
RLIM-202ENST00000349225 CLCN6P51797 869 aa16.89■□□□□ 0.29
RLIM-202ENST00000349225 USP16Q9Y5T5 823 aa16.89■□□□□ 0.29
RLIM-202ENST00000349225 CCDC171Q6TFL3 1326 aa16.89■□□□□ 0.29
RLIM-202ENST00000349225 SKILP12757 684 aa16.89■□□□□ 0.29
RLIM-202ENST00000349225 IQCB1Q15051 598 aa16.89■□□□□ 0.29
RLIM-202ENST00000349225 NEK11Q8NG66 645 aa16.89■□□□□ 0.29
RLIM-202ENST00000349225 TFIP11Q9UBB9 837 aaKnown RBP16.89■□□□□ 0.29
RLIM-202ENST00000349225 SETD1AO15047 1707 aaKnown RBP16.88■□□□□ 0.29
RLIM-202ENST00000349225 A0A087WWV3 80 aa16.88■□□□□ 0.29
RLIM-202ENST00000349225 VGFO15240 615 aaPredicted RBP16.88■□□□□ 0.29
RLIM-202ENST00000349225 SLU7O95391 586 aaKnown RBP16.88■□□□□ 0.29
RLIM-202ENST00000349225 C11orf57Q6ZUT1 292 aaPredicted RBP16.88■□□□□ 0.29
RLIM-202ENST00000349225 PGBD1Q96JS3 809 aa16.88■□□□□ 0.29
RLIM-202ENST00000349225 ELP1O95163 1332 aa16.88■□□□□ 0.29
RLIM-202ENST00000349225 EPB41L2O43491 1005 aaKnown RBP16.87■□□□□ 0.29
RLIM-202ENST00000349225 PNMA6AP0CW24 399 aaPredicted RBP16.87■□□□□ 0.29
RLIM-202ENST00000349225 CDC25BP30305 580 aa16.87■□□□□ 0.29
RLIM-202ENST00000349225 NME9Q86XW9 330 aa16.87■□□□□ 0.29
RLIM-202ENST00000349225 CCAR2Q8N163 923 aaKnown RBP16.87■□□□□ 0.29
RLIM-202ENST00000349225 CLSTN2Q9H4D0 955 aa16.87■□□□□ 0.29
RLIM-202ENST00000349225 TTC21BQ7Z4L5 1316 aa16.87■□□□□ 0.29
RLIM-202ENST00000349225 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.87■□□□□ 0.29
RLIM-202ENST00000349225 ATP8B2P98198 1209 aa16.87■□□□□ 0.29
RLIM-202ENST00000349225 PTH1RQ03431 593 aa16.87■□□□□ 0.29
RLIM-202ENST00000349225 TAF7LQ5H9L4 462 aa16.87■□□□□ 0.29
RLIM-202ENST00000349225 ZFP91Q96JP5 570 aaPredicted RBP16.87■□□□□ 0.29
RLIM-202ENST00000349225 FAM193AP78312 1265 aa16.86■□□□□ 0.29
RLIM-202ENST00000349225 KRT85P78386 507 aa16.86■□□□□ 0.29
RLIM-202ENST00000349225 ST5P78524 1137 aa16.86■□□□□ 0.29
RLIM-202ENST00000349225 GGT6Q6P531 493 aa16.86■□□□□ 0.29
RLIM-202ENST00000349225 CWC27Q6UX04 472 aaKnown RBP16.86■□□□□ 0.29
RLIM-202ENST00000349225 TPCN1Q9ULQ1 816 aa16.86■□□□□ 0.29
RLIM-202ENST00000349225 CCDC69A6NI79 296 aa16.85■□□□□ 0.29
RLIM-202ENST00000349225 CCDC93Q567U6 631 aa16.85■□□□□ 0.29
RLIM-202ENST00000349225 PAXIP1Q6ZW49 1069 aaPredicted RBP16.85■□□□□ 0.29
RLIM-202ENST00000349225 L2HGDHQ9H9P8 463 aa16.85■□□□□ 0.29
RLIM-202ENST00000349225 ATP7BP35670 1465 aa16.85■□□□□ 0.29
RLIM-202ENST00000349225 IDI1Q13907 227 aa16.85■□□□□ 0.29
RLIM-202ENST00000349225 ZRANB2O95218 330 aaKnown RBP eCLIP16.84■□□□□ 0.29
RLIM-202ENST00000349225 CCT4P50991 539 aaKnown RBP16.84■□□□□ 0.29
RLIM-202ENST00000349225 BMS1Q14692 1282 aaKnown RBP16.84■□□□□ 0.29
RLIM-202ENST00000349225 LCMT1Q9UIC8 334 aa16.84■□□□□ 0.29
RLIM-202ENST00000349225 ADCY9O60503 1353 aa16.84■□□□□ 0.29
RLIM-202ENST00000349225 MYO5BQ9ULV0 1848 aa16.84■□□□□ 0.29
RLIM-202ENST00000349225 LRRFIP2Q9Y608 721 aaKnown RBP16.84■□□□□ 0.29
RLIM-202ENST00000349225 LARP1BQ659C4 914 aaKnown RBP16.84■□□□□ 0.29
RLIM-202ENST00000349225 SARM1Q6SZW1 724 aa16.84■□□□□ 0.29
RLIM-202ENST00000349225 LEO1Q8WVC0 666 aaPredicted RBP16.84■□□□□ 0.29
RLIM-202ENST00000349225 JAKMIP1Q96N16 626 aaKnown RBP16.84■□□□□ 0.29
RLIM-202ENST00000349225 PDRG1Q9NUG6 133 aa16.84■□□□□ 0.29
RLIM-202ENST00000349225 CRB1P82279 1406 aa16.83■□□□□ 0.29
RLIM-202ENST00000349225 FILIP1Q7Z7B0 1213 aa16.83■□□□□ 0.29
RLIM-202ENST00000349225 CREBRFQ8IUR6 639 aa16.83■□□□□ 0.29
RLIM-202ENST00000349225 XRN1Q8IZH2 1706 aaKnown RBP16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms