RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 MAP2P11137 1827 aaKnown RBP11.16□□□□□ -0.62
NECAP1-201ENST00000339754 CCDC171Q6TFL3 1326 aa11.16□□□□□ -0.62
NECAP1-201ENST00000339754 KIF20BQ96Q89 1820 aa11.16□□□□□ -0.62
NECAP1-201ENST00000339754 TAF7LQ5H9L4 462 aa11.16□□□□□ -0.62
NECAP1-201ENST00000339754 RBM43Q6ZSC3 357 aaKnown RBP11.16□□□□□ -0.62
NECAP1-201ENST00000339754 HDGFL2Q7Z4V5 671 aaPredicted RBP11.16□□□□□ -0.62
NECAP1-201ENST00000339754 CKAP2LQ8IYA6 745 aa11.16□□□□□ -0.62
NECAP1-201ENST00000339754 RTF1Q92541 710 aaKnown RBP11.16□□□□□ -0.62
NECAP1-201ENST00000339754 NOL10Q9BSC4 688 aaKnown RBP11.16□□□□□ -0.62
NECAP1-201ENST00000339754 FEZ2Q9UHY8 353 aaPredicted RBP11.16□□□□□ -0.62
NECAP1-201ENST00000339754 PTPN14Q15678 1187 aa11.15□□□□□ -0.62
NECAP1-201ENST00000339754 CHMP3Q9Y3E7 222 aa11.15□□□□□ -0.62
NECAP1-201ENST00000339754 CHL1O00533 1208 aa11.15□□□□□ -0.63
NECAP1-201ENST00000339754 H2AFXP16104 143 aaPredicted RBP11.15□□□□□ -0.63
NECAP1-201ENST00000339754 CDC25BP30305 580 aa11.15□□□□□ -0.63
NECAP1-201ENST00000339754 BMS1Q14692 1282 aaKnown RBP11.15□□□□□ -0.63
NECAP1-201ENST00000339754 ARID5BQ14865 1188 aa11.15□□□□□ -0.63
NECAP1-201ENST00000339754 TRIM34Q9BYJ4 488 aa11.15□□□□□ -0.63
NECAP1-201ENST00000339754 HYPKQ9NX55 129 aa11.15□□□□□ -0.63
NECAP1-201ENST00000339754 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.15□□□□□ -0.63
NECAP1-201ENST00000339754 FHOD1Q9Y613 1164 aa11.15□□□□□ -0.63
NECAP1-201ENST00000339754 EMILIN1Q9Y6C2 1016 aa11.15□□□□□ -0.63
NECAP1-201ENST00000339754 SPATA31D1Q6ZQQ2 1576 aa11.14□□□□□ -0.63
NECAP1-201ENST00000339754 A2ML1A8K2U0 1454 aa11.14□□□□□ -0.63
NECAP1-201ENST00000339754 CDK12Q9NYV4 1490 aaPredicted RBP11.14□□□□□ -0.63
NECAP1-201ENST00000339754 SLU7O95391 586 aaKnown RBP11.14□□□□□ -0.63
NECAP1-201ENST00000339754 HAP1P54257 671 aaPredicted RBP11.14□□□□□ -0.63
NECAP1-201ENST00000339754 TRERF1Q96PN7 1200 aa11.14□□□□□ -0.63
NECAP1-201ENST00000339754 PRAM1Q96QH2 718 aa11.14□□□□□ -0.63
NECAP1-201ENST00000339754 LSG1Q9H089 658 aaKnown RBP11.14□□□□□ -0.63
NECAP1-201ENST00000339754 TSPYL1Q9H0U9 437 aa11.14□□□□□ -0.63
NECAP1-201ENST00000339754 TNMDQ9H2S6 317 aa11.14□□□□□ -0.63
NECAP1-201ENST00000339754 CABP1Q9NZU7 370 aa11.14□□□□□ -0.63
NECAP1-201ENST00000339754 ELP1O95163 1332 aa11.14□□□□□ -0.63
NECAP1-201ENST00000339754 MINK1Q8N4C8 1332 aaPredicted RBP11.14□□□□□ -0.63
NECAP1-201ENST00000339754 SGSM2O43147 1006 aa11.14□□□□□ -0.63
NECAP1-201ENST00000339754 GNAI2P04899 355 aa11.14□□□□□ -0.63
NECAP1-201ENST00000339754 SLC4A2P04920 1241 aa11.14□□□□□ -0.63
NECAP1-201ENST00000339754 CPA1P15085 419 aa11.14□□□□□ -0.63
NECAP1-201ENST00000339754 AEBP1Q8IUX7 1158 aa11.14□□□□□ -0.63
NECAP1-201ENST00000339754 CCDC83Q8IWF9 413 aa11.14□□□□□ -0.63
NECAP1-201ENST00000339754 DACT1Q9NYF0 836 aa11.14□□□□□ -0.63
NECAP1-201ENST00000339754 YTHDC2Q9H6S0 1430 aaKnown RBP11.13□□□□□ -0.63
NECAP1-201ENST00000339754 PNMA6EA0A0J9YXQ4 647 aa11.13□□□□□ -0.63
NECAP1-201ENST00000339754 ZNF165P49910 485 aa11.13□□□□□ -0.63
NECAP1-201ENST00000339754 ST3GAL1Q11201 340 aa11.13□□□□□ -0.63
NECAP1-201ENST00000339754 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.13□□□□□ -0.63
NECAP1-201ENST00000339754 F6X3S4 739 aa11.13□□□□□ -0.63
NECAP1-201ENST00000339754 ATP8B2P98198 1209 aa11.13□□□□□ -0.63
NECAP1-201ENST00000339754 G2E3Q7L622 706 aa11.13□□□□□ -0.63
NECAP1-201ENST00000339754 ALKQ9UM73 1620 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 NEMFO60524 1076 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 SKILP12757 684 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 PLA2G4AP47712 749 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 CCT4P50991 539 aaKnown RBP11.12□□□□□ -0.63
NECAP1-201ENST00000339754 SLC4A10Q6U841 1118 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 CLSTN2Q9H4D0 955 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 KCND1Q9NSA2 647 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 AOX1Q06278 1338 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 TTC21AQ8NDW8 1320 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 VPS37CA5D8V6 355 aaPredicted RBP11.12□□□□□ -0.63
NECAP1-201ENST00000339754 KRT85P78386 507 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 CCZ1BP86790 482 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 CCZ1P86791 482 aaPredicted RBP11.12□□□□□ -0.63
NECAP1-201ENST00000339754 RAD51AP2Q09MP3 1159 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 RNF20Q5VTR2 975 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 FAM173BQ6P4H8 233 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 CCAR2Q8N163 923 aaKnown RBP11.12□□□□□ -0.63
NECAP1-201ENST00000339754 GTF3C6Q969F1 213 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 DNAJC25Q9H1X3 360 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 AATKQ6ZMQ8 1374 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 PTPRMP28827 1452 aa11.12□□□□□ -0.63
NECAP1-201ENST00000339754 NPHP1O15259 732 aa11.11□□□□□ -0.63
NECAP1-201ENST00000339754 ERCC6LQ2NKX8 1250 aa11.11□□□□□ -0.63
NECAP1-201ENST00000339754 SARM1Q6SZW1 724 aa11.11□□□□□ -0.63
NECAP1-201ENST00000339754 CDK19Q9BWU1 502 aa11.11□□□□□ -0.63
NECAP1-201ENST00000339754 L2HGDHQ9H9P8 463 aa11.11□□□□□ -0.63
NECAP1-201ENST00000339754 TRHP20396 242 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-201ENST00000339754 CASTP20810 708 aaKnown RBP11.11□□□□□ -0.63
NECAP1-201ENST00000339754 C1QBPQ07021 282 aaKnown RBP11.11□□□□□ -0.63
NECAP1-201ENST00000339754 IQCB1Q15051 598 aa11.11□□□□□ -0.63
NECAP1-201ENST00000339754 NFATC2IPQ8NCF5 419 aa11.11□□□□□ -0.63
NECAP1-201ENST00000339754 MRFAP1L1Q96HT8 127 aa11.11□□□□□ -0.63
NECAP1-201ENST00000339754 ZSCAN31Q96LW9 406 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-201ENST00000339754 CHMP4AQ9BY43 222 aa11.11□□□□□ -0.63
NECAP1-201ENST00000339754 DDX19AQ9NUU7 478 aaKnown RBP11.11□□□□□ -0.63
NECAP1-201ENST00000339754 TRMT1Q9NXH9 659 aaKnown RBP11.11□□□□□ -0.63
NECAP1-201ENST00000339754 MAP4K4O95819 1239 aaPredicted RBP11.1□□□□□ -0.63
NECAP1-201ENST00000339754 PNMA6AP0CW24 399 aaPredicted RBP11.1□□□□□ -0.63
NECAP1-201ENST00000339754 CLCN6P51797 869 aa11.1□□□□□ -0.63
NECAP1-201ENST00000339754 CCDC93Q567U6 631 aa11.1□□□□□ -0.63
NECAP1-201ENST00000339754 VPS53Q5VIR6 699 aa11.1□□□□□ -0.63
NECAP1-201ENST00000339754 TTC21BQ7Z4L5 1316 aa11.1□□□□□ -0.63
NECAP1-201ENST00000339754 ME3Q16798 604 aa11.1□□□□□ -0.63
NECAP1-201ENST00000339754 CDC37L1Q7L3B6 337 aa11.1□□□□□ -0.63
NECAP1-201ENST00000339754 LRRN4CLQ8ND94 238 aa11.1□□□□□ -0.63
NECAP1-201ENST00000339754 SH2B1Q9NRF2 756 aaPredicted RBP11.1□□□□□ -0.63
NECAP1-201ENST00000339754 CCDC69A6NI79 296 aa11.09□□□□□ -0.63
NECAP1-201ENST00000339754 NR1I2O75469 434 aa11.09□□□□□ -0.63
NECAP1-201ENST00000339754 ZRANB2O95218 330 aaKnown RBP eCLIP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms