RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 LINS1Q8NG48 757 aa17.98■□□□□ 0.47
CLK4-201ENST00000316308 EAF2Q96CJ1 260 aaPredicted RBP17.98■□□□□ 0.47
CLK4-201ENST00000316308 SGSM2O43147 1006 aa17.97■□□□□ 0.47
CLK4-201ENST00000316308 ALDH1L1O75891 902 aa17.97■□□□□ 0.47
CLK4-201ENST00000316308 KIF1AQ12756 1690 aa17.97■□□□□ 0.47
CLK4-201ENST00000316308 ATP5J2-PTCD1G3V325 749 aa17.97■□□□□ 0.47
CLK4-201ENST00000316308 PTCD1O75127 700 aaKnown RBP17.97■□□□□ 0.47
CLK4-201ENST00000316308 PTH1RQ03431 593 aa17.96■□□□□ 0.47
CLK4-201ENST00000316308 AACSQ86V21 672 aa17.96■□□□□ 0.47
CLK4-201ENST00000316308 IFNL2Q8IZJ0 200 aa17.96■□□□□ 0.47
CLK4-201ENST00000316308 LSG1Q9H089 658 aaKnown RBP17.96■□□□□ 0.47
CLK4-201ENST00000316308 ADAMTS7Q9UKP4 1686 aa17.96■□□□□ 0.47
CLK4-201ENST00000316308 OVOS2A0A0G2JMS6 1433 aa17.96■□□□□ 0.47
CLK4-201ENST00000316308 NSFL1CQ9UNZ2 370 aaKnown RBP17.96■□□□□ 0.47
CLK4-201ENST00000316308 NDUFB9Q9Y6M9 179 aa17.96■□□□□ 0.47
CLK4-201ENST00000316308 AOX1Q06278 1338 aa17.96■□□□□ 0.47
CLK4-201ENST00000316308 SCN11AQ9UI33 1791 aa17.96■□□□□ 0.47
CLK4-201ENST00000316308 NEURL1BA8MQ27 555 aa17.95■□□□□ 0.46
CLK4-201ENST00000316308 HSPA4P34932 840 aa17.95■□□□□ 0.46
CLK4-201ENST00000316308 CRYBG1Q9Y4K1 1723 aa17.95■□□□□ 0.46
CLK4-201ENST00000316308 CHGBP05060 677 aa17.95■□□□□ 0.46
CLK4-201ENST00000316308 CLEC17AQ6ZS10 378 aa17.95■□□□□ 0.46
CLK4-201ENST00000316308 CLASRPQ8N2M8 674 aaKnown RBP17.95■□□□□ 0.46
CLK4-201ENST00000316308 EDC3Q96F86 508 aaKnown RBP17.95■□□□□ 0.46
CLK4-201ENST00000316308 LMBRD1Q9NUN5 540 aa17.95■□□□□ 0.46
CLK4-201ENST00000316308 DDX49Q9Y6V7 483 aaKnown RBP17.95■□□□□ 0.46
CLK4-201ENST00000316308 SPATA31A3Q5VYP0 1347 aa17.95■□□□□ 0.46
CLK4-201ENST00000316308 L1TD1Q5T7N2 865 aaKnown RBP17.94■□□□□ 0.46
CLK4-201ENST00000316308 GRPEL1Q9HAV7 217 aa17.94■□□□□ 0.46
CLK4-201ENST00000316308 SNX14Q9Y5W7 946 aa17.94■□□□□ 0.46
CLK4-201ENST00000316308 BRINP3Q76B58 766 aa17.94■□□□□ 0.46
CLK4-201ENST00000316308 TNS3Q68CZ2 1445 aa17.94■□□□□ 0.46
CLK4-201ENST00000316308 PRPF40AO75400 957 aaKnown RBP17.93■□□□□ 0.46
CLK4-201ENST00000316308 GCKRQ14397 625 aa17.93■□□□□ 0.46
CLK4-201ENST00000316308 CNTROBQ8N137 903 aa17.93■□□□□ 0.46
CLK4-201ENST00000316308 RBM27Q9P2N5 1060 aaKnown RBP17.93■□□□□ 0.46
CLK4-201ENST00000316308 NCLP19338 710 aaKnown RBP17.93■□□□□ 0.46
CLK4-201ENST00000316308 RAD50Q92878 1312 aa17.93■□□□□ 0.46
CLK4-201ENST00000316308 FAM227BQ96M60 508 aa17.93■□□□□ 0.46
CLK4-201ENST00000316308 RRAGDQ9NQL2 400 aaPredicted RBP17.93■□□□□ 0.46
CLK4-201ENST00000316308 EIF5BO60841 1220 aaKnown RBP17.92■□□□□ 0.46
CLK4-201ENST00000316308 IFIT2P09913 472 aaKnown RBP17.92■□□□□ 0.46
CLK4-201ENST00000316308 NUCB2P80303 420 aa17.92■□□□□ 0.46
CLK4-201ENST00000316308 ADCK5Q3MIX3 580 aa17.92■□□□□ 0.46
CLK4-201ENST00000316308 CADPS2Q86UW7 1296 aa17.92■□□□□ 0.46
CLK4-201ENST00000316308 ECHDC1Q9NTX5 307 aa17.92■□□□□ 0.46
CLK4-201ENST00000316308 UTYO14607 1347 aa17.92■□□□□ 0.46
CLK4-201ENST00000316308 MCCP23508 829 aa17.92■□□□□ 0.46
CLK4-201ENST00000316308 ANKRD13DQ6ZTN6 518 aa17.92■□□□□ 0.46
CLK4-201ENST00000316308 DDX58O95786 925 aaKnown RBP17.91■□□□□ 0.46
CLK4-201ENST00000316308 TTC5Q8N0Z6 440 aa17.91■□□□□ 0.46
CLK4-201ENST00000316308 GPT2Q8TD30 523 aa17.91■□□□□ 0.46
CLK4-201ENST00000316308 BOLA2Q9H3K6 86 aa17.91■□□□□ 0.46
CLK4-201ENST00000316308 GLRX3O76003 335 aaKnown RBP17.91■□□□□ 0.46
CLK4-201ENST00000316308 CAVIN1Q6NZI2 390 aaKnown RBP17.91■□□□□ 0.46
CLK4-201ENST00000316308 UBE3BQ7Z3V4 1068 aa17.91■□□□□ 0.46
CLK4-201ENST00000316308 DCAF5Q96JK2 942 aa17.91■□□□□ 0.46
CLK4-201ENST00000316308 METTL22Q9BUU2 404 aaPredicted RBP17.91■□□□□ 0.46
CLK4-201ENST00000316308 USP42Q9H9J4 1324 aaKnown RBP17.91■□□□□ 0.46
CLK4-201ENST00000316308 LARGE1O95461 756 aa17.9■□□□□ 0.46
CLK4-201ENST00000316308 CABP4P57796 275 aa17.9■□□□□ 0.46
CLK4-201ENST00000316308 ANAPC15P60006 121 aa17.9■□□□□ 0.46
CLK4-201ENST00000316308 HSP90AB4PQ58FF6 505 aa17.9■□□□□ 0.46
CLK4-201ENST00000316308 CCDC9Q9Y3X0 531 aaKnown RBP17.9■□□□□ 0.46
CLK4-201ENST00000316308 TAF6LQ9Y6J9 622 aa17.9■□□□□ 0.46
CLK4-201ENST00000316308 NBPF26B4DH59 902 aa17.9■□□□□ 0.46
CLK4-201ENST00000316308 SNRPA1P09661 255 aaKnown RBP17.9■□□□□ 0.46
CLK4-201ENST00000316308 CUL4AQ13619 759 aa17.9■□□□□ 0.46
CLK4-201ENST00000316308 NBPF14Q5TI25 921 aa17.9■□□□□ 0.46
CLK4-201ENST00000316308 NBPF10Q6P3W6 841 aaKnown RBP17.9■□□□□ 0.46
CLK4-201ENST00000316308 LARP1Q6PKG0 1096 aaKnown RBP17.9■□□□□ 0.46
CLK4-201ENST00000316308 NBPF15Q8N660 670 aa17.9■□□□□ 0.46
CLK4-201ENST00000316308 CWC22Q9HCG8 908 aaKnown RBP17.9■□□□□ 0.46
CLK4-201ENST00000316308 CHMP4AQ9BY43 222 aa17.89■□□□□ 0.46
CLK4-201ENST00000316308 GDPD2Q9HCC8 539 aa17.89■□□□□ 0.46
CLK4-201ENST00000316308 TTC41PQ6P2S7 1318 aa17.89■□□□□ 0.45
CLK4-201ENST00000316308 G3BP1Q13283 466 aaKnown RBP eCLIP17.89■□□□□ 0.45
CLK4-201ENST00000316308 KLHL40Q2TBA0 621 aa17.89■□□□□ 0.45
CLK4-201ENST00000316308 AK2P54819 239 aa17.88■□□□□ 0.45
CLK4-201ENST00000316308 PRPF40BQ6NWY9 871 aaKnown RBP17.88■□□□□ 0.45
CLK4-201ENST00000316308 TTLL7Q6ZT98 887 aa17.88■□□□□ 0.45
CLK4-201ENST00000316308 PRDM11Q9NQV5 511 aa17.88■□□□□ 0.45
CLK4-201ENST00000316308 DIAPH3Q9NSV4 1193 aa17.88■□□□□ 0.45
CLK4-201ENST00000316308 MRE11P49959 708 aa17.88■□□□□ 0.45
CLK4-201ENST00000316308 TOM1L2Q6ZVM7 507 aa17.88■□□□□ 0.45
CLK4-201ENST00000316308 RUFY3Q7L099 469 aa17.88■□□□□ 0.45
CLK4-201ENST00000316308 TPRNQ4KMQ1 711 aa17.87■□□□□ 0.45
CLK4-201ENST00000316308 TTC14Q96N46 770 aa17.87■□□□□ 0.45
CLK4-201ENST00000316308 FMNL2Q96PY5 1086 aa17.87■□□□□ 0.45
CLK4-201ENST00000316308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.87■□□□□ 0.457e-7■■■■□ 25.1
CLK4-201ENST00000316308 XIRP1Q702N8 1843 aaKnown RBP17.87■□□□□ 0.45
CLK4-201ENST00000316308 ZNF335Q9H4Z2 1342 aaPredicted RBP17.87■□□□□ 0.45
CLK4-201ENST00000316308 A0A0D9SFI3 127 aa17.87■□□□□ 0.45
CLK4-201ENST00000316308 GOLGA6L22H0YM25 854 aa17.87■□□□□ 0.45
CLK4-201ENST00000316308 A1BGP04217 495 aa17.87■□□□□ 0.45
CLK4-201ENST00000316308 NEXNQ0ZGT2 675 aa17.87■□□□□ 0.45
CLK4-201ENST00000316308 NMIQ13287 307 aaPredicted RBP17.87■□□□□ 0.45
CLK4-201ENST00000316308 SKOR2Q2VWA4 1001 aaPredicted RBP17.87■□□□□ 0.45
CLK4-201ENST00000316308 STRN4Q9NRL3 753 aa17.87■□□□□ 0.45
CLK4-201ENST00000316308 BRD1O95696 1058 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms