RNA–Protein interactions for RNA: ENST00000228264.10

DDX11-201, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-201ENST00000228264 MRVI1Q9Y6F6 885 aa12.5□□□□□ -0.41
DDX11-201ENST00000228264 SGSM2O43147 1006 aa12.5□□□□□ -0.41
DDX11-201ENST00000228264 MCCP23508 829 aa12.5□□□□□ -0.41
DDX11-201ENST00000228264 PRIMPOLQ96LW4 560 aa12.5□□□□□ -0.41
DDX11-201ENST00000228264 PTPRCP08575 1304 aa12.5□□□□□ -0.41
DDX11-201ENST00000228264 FAM227BQ96M60 508 aa12.49□□□□□ -0.41
DDX11-201ENST00000228264 TPCN1Q9ULQ1 816 aa12.49□□□□□ -0.41
DDX11-201ENST00000228264 USP16Q9Y5T5 823 aa12.49□□□□□ -0.41
DDX11-201ENST00000228264 KCNQ3O43525 872 aa12.49□□□□□ -0.41
DDX11-201ENST00000228264 EDC3Q96F86 508 aaKnown RBP12.49□□□□□ -0.41
DDX11-201ENST00000228264 CPSF1Q10570 1443 aaKnown RBP12.49□□□□□ -0.41
DDX11-201ENST00000228264 ATP7BP35670 1465 aa12.49□□□□□ -0.41
DDX11-201ENST00000228264 ANO6Q4KMQ2 910 aa12.49□□□□□ -0.41
DDX11-201ENST00000228264 DACT1Q9NYF0 836 aa12.49□□□□□ -0.41
DDX11-201ENST00000228264 CGNQ9P2M7 1197 aaKnown RBP12.49□□□□□ -0.41
DDX11-201ENST00000228264 SRGAP3O43295 1099 aa12.48□□□□□ -0.41
DDX11-201ENST00000228264 IRX3P78415 501 aaPredicted RBP12.48□□□□□ -0.41
DDX11-201ENST00000228264 LRRN4CLQ8ND94 238 aa12.48□□□□□ -0.41
DDX11-201ENST00000228264 CDK12Q9NYV4 1490 aaPredicted RBP12.48□□□□□ -0.41
DDX11-201ENST00000228264 RAD50Q92878 1312 aa12.48□□□□□ -0.41
DDX11-201ENST00000228264 CACTINQ8WUQ7 758 aaKnown RBP12.48□□□□□ -0.41
DDX11-201ENST00000228264 DNAJC25Q9H1X3 360 aa12.48□□□□□ -0.41
DDX11-201ENST00000228264 NR1I2O75469 434 aa12.47□□□□□ -0.41
DDX11-201ENST00000228264 DRC7Q8IY82 874 aa12.47□□□□□ -0.41
DDX11-201ENST00000228264 RHPN1Q8TCX5 695 aa12.47□□□□□ -0.41
DDX11-201ENST00000228264 ANKRD7Q92527 254 aa12.47□□□□□ -0.41
DDX11-201ENST00000228264 CBX8Q9HC52 389 aa12.47□□□□□ -0.41
DDX11-201ENST00000228264 TRMT1Q9NXH9 659 aaKnown RBP12.47□□□□□ -0.41
DDX11-201ENST00000228264 TAOK2Q9UL54 1235 aa12.47□□□□□ -0.41
DDX11-201ENST00000228264 LIMCH1Q9UPQ0 1083 aa12.47□□□□□ -0.41
DDX11-201ENST00000228264 PTPN21Q16825 1174 aa12.47□□□□□ -0.41
DDX11-201ENST00000228264 TUBGCP6Q96RT7 1819 aa12.47□□□□□ -0.41
DDX11-201ENST00000228264 KIF24Q5T7B8 1368 aa12.47□□□□□ -0.41
DDX11-201ENST00000228264 TMEM131LA2VDJ0 1609 aa12.47□□□□□ -0.41
DDX11-201ENST00000228264 PHF14O94880 888 aa12.47□□□□□ -0.41
DDX11-201ENST00000228264 SLFNL1Q499Z3 407 aa12.47□□□□□ -0.41
DDX11-201ENST00000228264 TRERF1Q96PN7 1200 aa12.47□□□□□ -0.41
DDX11-201ENST00000228264 MCM2P49736 904 aa12.46□□□□□ -0.41
DDX11-201ENST00000228264 CCT4P50991 539 aaKnown RBP12.46□□□□□ -0.41
DDX11-201ENST00000228264 TYRO3Q06418 890 aa12.46□□□□□ -0.41
DDX11-201ENST00000228264 TMEM87AQ8NBN3 555 aa12.46□□□□□ -0.41
DDX11-201ENST00000228264 KLHDC4Q8TBB5 520 aa12.46□□□□□ -0.41
DDX11-201ENST00000228264 EYA1Q99502 592 aa12.46□□□□□ -0.41
DDX11-201ENST00000228264 SLC52A1Q9NWF4 448 aa12.46□□□□□ -0.41
DDX11-201ENST00000228264 REREQ9P2R6 1566 aa12.46□□□□□ -0.41
DDX11-201ENST00000228264 PATL2C9JE40 543 aaKnown RBP12.46□□□□□ -0.41
DDX11-201ENST00000228264 JAK2O60674 1132 aa12.46□□□□□ -0.41
DDX11-201ENST00000228264 LRRC2Q9BYS8 371 aa12.46□□□□□ -0.41
DDX11-201ENST00000228264 TLR7Q9NYK1 1049 aaKnown RBP12.46□□□□□ -0.41
DDX11-201ENST00000228264 STAP2Q9UGK3 403 aa12.46□□□□□ -0.41
DDX11-201ENST00000228264 CCDC61Q9Y6R9 512 aa12.46□□□□□ -0.41
DDX11-201ENST00000228264 UBTFL1P0CB47 393 aaPredicted RBP12.46□□□□□ -0.42
DDX11-201ENST00000228264 ANAPC15P60006 121 aa12.46□□□□□ -0.42
DDX11-201ENST00000228264 OS9Q13438 667 aaPredicted RBP12.46□□□□□ -0.42
DDX11-201ENST00000228264 MTERF4Q7Z6M4 381 aaKnown RBP12.46□□□□□ -0.42
DDX11-201ENST00000228264 IL17REQ8NFR9 667 aa12.46□□□□□ -0.42
DDX11-201ENST00000228264 STK31Q9BXU1 1019 aa12.46□□□□□ -0.42
DDX11-201ENST00000228264 EDC4Q6P2E9 1401 aaKnown RBP12.46□□□□□ -0.42
DDX11-201ENST00000228264 ACEP12821 1306 aa12.45□□□□□ -0.42
DDX11-201ENST00000228264 LARP1Q6PKG0 1096 aaKnown RBP12.45□□□□□ -0.42
DDX11-201ENST00000228264 PRAMEF22A3QJZ6 481 aa12.45□□□□□ -0.42
DDX11-201ENST00000228264 IFIT2P09913 472 aaKnown RBP12.45□□□□□ -0.42
DDX11-201ENST00000228264 CNPY4Q8N129 248 aa12.45□□□□□ -0.42
DDX11-201ENST00000228264 PDRG1Q9NUG6 133 aa12.45□□□□□ -0.42
DDX11-201ENST00000228264 CLTCQ00610 1675 aaKnown RBP12.45□□□□□ -0.42
DDX11-201ENST00000228264 UVSSAQ2YD98 709 aa12.45□□□□□ -0.42
DDX11-201ENST00000228264 UTP14CQ5TAP6 766 aaKnown RBP12.45□□□□□ -0.42
DDX11-201ENST00000228264 FAM184AQ8NB25 1140 aa12.45□□□□□ -0.42
DDX11-201ENST00000228264 TRIM5Q9C035 493 aa12.45□□□□□ -0.42
DDX11-201ENST00000228264 CCDC9Q9Y3X0 531 aaKnown RBP12.45□□□□□ -0.42
DDX11-201ENST00000228264 DLC1Q96QB1 1528 aa12.44□□□□□ -0.42
DDX11-201ENST00000228264 PEAK1Q9H792 1746 aa12.44□□□□□ -0.42
DDX11-201ENST00000228264 ERICH4A6NGS2 130 aa12.44□□□□□ -0.42
DDX11-201ENST00000228264 TNNT1P13805 278 aa12.44□□□□□ -0.42
DDX11-201ENST00000228264 PGBD1Q96JS3 809 aa12.44□□□□□ -0.42
DDX11-201ENST00000228264 CTIFO43310 598 aaKnown RBP12.44□□□□□ -0.42
DDX11-201ENST00000228264 ZSCAN25Q6NSZ9 544 aa12.44□□□□□ -0.42
DDX11-201ENST00000228264 PREX1Q8TCU6 1659 aa12.44□□□□□ -0.42
DDX11-201ENST00000228264 TAF7Q15545 349 aaPredicted RBP12.44□□□□□ -0.42
DDX11-201ENST00000228264 LARP1BQ659C4 914 aaKnown RBP12.44□□□□□ -0.42
DDX11-201ENST00000228264 ZNF771Q7L3S4 317 aaPredicted RBP12.44□□□□□ -0.42
DDX11-201ENST00000228264 CTNNA3Q9UI47 895 aa12.44□□□□□ -0.42
DDX11-201ENST00000228264 TTC21BQ7Z4L5 1316 aa12.43□□□□□ -0.42
DDX11-201ENST00000228264 CEP170BQ9Y4F5 1589 aaPredicted RBP12.43□□□□□ -0.42
DDX11-201ENST00000228264 C11orf57Q6ZUT1 292 aaPredicted RBP12.43□□□□□ -0.42
DDX11-201ENST00000228264 HDGFP51858 240 aaKnown RBP12.43□□□□□ -0.42
DDX11-201ENST00000228264 CCDC8Q9H0W5 538 aaPredicted RBP12.43□□□□□ -0.42
DDX11-201ENST00000228264 MLH3Q9UHC1 1453 aa12.43□□□□□ -0.42
DDX11-201ENST00000228264 PI4KAP2A4QPH2 592 aa12.42□□□□□ -0.42
DDX11-201ENST00000228264 PI4KAP1Q8N8J0 262 aa12.42□□□□□ -0.42
DDX11-201ENST00000228264 SIL1Q9H173 461 aa12.42□□□□□ -0.42
DDX11-201ENST00000228264 ZNF215Q9UL58 517 aaPredicted RBP12.42□□□□□ -0.42
DDX11-201ENST00000228264 A0A0G2JLW4 131 aa12.42□□□□□ -0.42
DDX11-201ENST00000228264 CWF19L2Q2TBE0 894 aaKnown RBP12.42□□□□□ -0.42
DDX11-201ENST00000228264 KMT5BQ4FZB7 885 aa12.42□□□□□ -0.42
DDX11-201ENST00000228264 RAB11FIP3O75154 756 aa12.41□□□□□ -0.42
DDX11-201ENST00000228264 AMPHP49418 695 aa12.41□□□□□ -0.42
DDX11-201ENST00000228264 FILIP1Q7Z7B0 1213 aa12.41□□□□□ -0.42
DDX11-201ENST00000228264 ZNF589Q86UQ0 364 aaPredicted RBP12.41□□□□□ -0.42
DDX11-201ENST00000228264 SSH3Q8TE77 659 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms