RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	ARID1B	Q8NFD5	2236 aa	Predicted RBP	15.71	■□□□□ 0.1
CACNA1A-238	ENST00000637276	IFNA4	P05014	189 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	CKMT2	P17540	419 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	AGTR2	P50052	363 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	SMS	P52788	366 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	ZXDB	P98169	803 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	IER5L	Q5T953	404 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	PTF1A	Q7RTS3	328 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	TFAP2B	Q92481	460 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	GML	Q99445	158 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	B4GALT7	Q9UBV7	327 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	ST14	Q9Y5Y6	855 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	CRYM-AS1	A6NIL9	109 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	CLIC3	O95833	236 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	SENP5	Q96HI0	755 aa	Predicted RBP	15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	SFXN2	Q96NB2	322 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	IL17F	Q96PD4	163 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	TLL2	Q9Y6L7	1015 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276		A0A087WUU8	490 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	YJEFN3	A6XGL0	299 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	PRPS2	P11908	318 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	TPSB2	P20231	275 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	FCER1G	P30273	86 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	TPSAB1	Q15661	275 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	MEP1A	Q16819	746 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	HES5	Q5TA89	166 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	ZNF517	Q6ZMY9	492 aa	Predicted RBP	15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	ZNF695	Q8IW36	515 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	OR1S1	Q8NH92	325 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	TP63	Q9H3D4	680 aa	Predicted RBP	15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	AKTIP	Q9H8T0	292 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	SMIM35	A0A1B0GVV1	85 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	SERTM2	A0A1B0GWG4	89 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	CSTA	P01040	98 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	HLA-DQB2	P05538	268 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	MPPED2	Q15777	294 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	KIAA0895L	Q68EN5	471 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	KIAA1211L	Q6NV74	962 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	VSTM1	Q6UX27	236 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	MOCOS	Q96EN8	888 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	TMEM45A	Q9NWC5	275 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	ZDHHC2	Q9UIJ5	367 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	TEX51	A0A1B0GUA7	166 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	NOTO	A8MTQ0	251 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	OR2J3	O76001	311 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	APOA2	P02652	100 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	STS	P08842	583 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	ELK4	P28324	431 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	IDH3G	P51553	393 aa	Predicted RBP	15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	CLCN2	P51788	898 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	AGFG1	P52594	562 aa	Known RBP	15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	ASTE1	Q2TB18	679 aa	Predicted RBP	15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	TRIM73	Q86UV7	250 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	SLAMF7	Q9NQ25	335 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	ZNF541	Q9H0D2	1346 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	LOC100130705	A0A1B0GUX0	176 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	S1PR1	P21453	382 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	MMP8	P22894	467 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	LBX1	P52954	281 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	SLAMF1	Q13291	335 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	SLC35G1	Q2M3R5	365 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	OR52E2	Q8NGJ4	325 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	ZNF566	Q969W8	418 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	LRRN3	Q9H3W5	708 aa		15.7	■□□□□ 0.1
CACNA1A-238	ENST00000637276	ATRNL1	Q5VV63	1379 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	ARVCF	O00192	962 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	SYN3	O14994	580 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	DNAJB1	P25685	340 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	LIN52	Q52LA3	116 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	TMEM71	Q6P5X7	295 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	WDR53	Q7Z5U6	358 aa	Predicted RBP	15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	GLYATL1	Q969I3	302 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	TMBIM1	Q969X1	311 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	TMEM109	Q9BVC6	243 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	PCDHGB2	Q9Y5G2	931 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	RAP2A	P10114	183 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	CBR1	P16152	277 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	PGGT1B	P53609	377 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	HSD11B2	P80365	405 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	ERV3-1	Q14264	604 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	FAM26D	Q5JW98	314 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	TFG	Q92734	400 aa	Predicted RBP	15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	FBXL20	Q96IG2	436 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	TSNAX	Q99598	290 aa	Known RBP	15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	FBXW11	Q9UKB1	542 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	NAALAD2	Q9Y3Q0	740 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	HSPB11	Q9Y547	144 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	KCTD3	Q9Y597	815 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	AFDN	P55196	1824 aa	Known RBP	15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	STK19	P49842	368 aa	Predicted RBP	15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	LILRA4	P59901	499 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	CRELD2	Q6UXH1	353 aa	Predicted RBP	15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	SERINC2	Q96SA4	455 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	RPL36	Q9Y3U8	105 aa	Known RBP	15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	PCDHGA11	Q9Y5H2	935 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	CDC14C	A4D256	554 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	TERT	O14746	1132 aa	Known RBP	15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	DEFA4	P12838	97 aa		15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	CRYZ	Q08257	329 aa	Known RBP	15.69	■□□□□ 0.1
CACNA1A-238	ENST00000637276	MYLK3	Q32MK0	819 aa		15.69	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms