RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 XKP51811 444 aa18.58■□□□□ 0.57
PDLIM2-221ENST00000622702 RPS18P62269 152 aaKnown RBP18.58■□□□□ 0.57
PDLIM2-221ENST00000622702 ID2Q02363 134 aa18.58■□□□□ 0.57
PDLIM2-221ENST00000622702 NSDHLQ15738 373 aa18.58■□□□□ 0.57
PDLIM2-221ENST00000622702 CPZQ66K79 652 aa18.58■□□□□ 0.57
PDLIM2-221ENST00000622702 TSPEARQ8WU66 669 aa18.58■□□□□ 0.57
PDLIM2-221ENST00000622702 TSLPQ969D9 159 aa18.58■□□□□ 0.57
PDLIM2-221ENST00000622702 DUSP26Q9BV47 211 aa18.58■□□□□ 0.57
PDLIM2-221ENST00000622702 ALOXE3Q9BYJ1 711 aa18.58■□□□□ 0.57
PDLIM2-221ENST00000622702 DYTNA2CJ06 578 aa18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 ZNF891A8MT65 544 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 MYO1GB0I1T2 1018 aa18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 NKX2-8O15522 239 aa18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 PDPK1O15530 556 aa18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 IGHEP01854 428 aa18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 PGRP06401 933 aa18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 SLC35E2P0CK97 266 aa18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 CSNK2A2P19784 350 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 WNT3P56703 355 aa18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 PHC1P78364 1004 aa18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 PGS1Q32NB8 556 aa18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 FAM91A1Q658Y4 838 aa18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 TMEM205Q6UW68 189 aa18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 SLC52A3Q9NQ40 469 aa18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 ACSS1Q9NUB1 689 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 FAM120CQ9NX05 1096 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-221ENST00000622702 A0A1W2PS29 197 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 SCN2BO60939 215 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 CREG1O75629 220 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 C8orf89P0DMQ9 161 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 PRKAR1AP10644 381 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 CD1EP15812 388 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 PORP16435 677 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 NTSP30990 170 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 FEN1P39748 380 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 DGKQP52824 942 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 KCNK10P57789 538 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 ZNF750Q32MQ0 723 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 ANXA8L1Q5VT79 327 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 FAM69BQ5VUD6 431 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 OR4F3Q6IEY1 312 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 FAM180BQ6P0A1 224 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 MSANTD1Q6ZTZ1 278 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 ST13P4Q8IZP2 240 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 LRRC25Q8N386 305 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 SUN3Q8TAQ9 357 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 METTL21AQ8WXB1 218 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 CIDECQ96AQ7 238 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 NACC2Q96BF6 587 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 SPDL1Q96EA4 605 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 ZBED6CLQ96FA7 236 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 BBS4Q96RK4 519 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 PELOQ9BRX2 385 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 SLAMF7Q9NQ25 335 aa18.57■□□□□ 0.56
PDLIM2-221ENST00000622702 CAPN14A8MX76 684 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 NR5A2O00482 541 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 RNASET2O00584 256 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 CFLARO15519 480 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 ATP1B1P05026 303 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 MMP11P24347 488 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 GALNSP34059 522 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 MPIP34949 423 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 STT3AP46977 705 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 PLIN5Q00G26 463 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 DUSP2Q05923 314 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 SSPNQ14714 243 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 MLC1Q15049 377 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 MAPRE2Q15555 327 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 GK5Q6ZS86 529 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 TREML1Q86YW5 311 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 FITM2Q8N6M3 262 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 ERP27Q96DN0 273 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 AMDHD1Q96NU7 426 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 OR52E6Q96RD3 313 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 C19orf25Q9UFG5 118 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 ATMQ13315 3056 aa18.56■□□□□ 0.56
PDLIM2-221ENST00000622702 LOC102723996A0A087X1L8 192 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 PRSS51A0A1B0GVH4 220 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 SNRPB2P08579 225 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 CAPN3P20807 821 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 LRRC74AQ0VAA2 488 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 TIGD2Q4W5G0 525 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 LANCL3Q6ZV70 420 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 ANKRD37Q7Z713 158 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 CCDC116Q8IYX3 515 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 VPS37AQ8NEZ2 397 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 ZFP28Q8NHY6 868 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 VPS33AQ96AX1 596 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 RBM18Q96H35 190 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 DGAT2Q96PD7 388 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 SLC25A23Q9BV35 468 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 GLIPR2Q9H4G4 154 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 ADAP2Q9NPF8 381 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 HS3ST3B1Q9Y662 390 aa18.55■□□□□ 0.56
PDLIM2-221ENST00000622702 A0A1W2PP18 115 aa18.54■□□□□ 0.56
PDLIM2-221ENST00000622702 A0A1W2PQ72 361 aa18.54■□□□□ 0.56
PDLIM2-221ENST00000622702 A0A1W2PRB8 838 aa18.54■□□□□ 0.56
PDLIM2-221ENST00000622702 CCDC154A6NI56 674 aa18.54■□□□□ 0.56
PDLIM2-221ENST00000622702 OR10H2O60403 315 aa18.54■□□□□ 0.56
PDLIM2-221ENST00000622702 NCBP2P52298 156 aaKnown RBP eCLIP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms