RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 DNMT3AQ9Y6K1 912 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-205ENST00000594973 A0A0X1KG70 313 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 A0A1W2PQF6 199 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 H3BQ06 376 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 PLRG1O43660 514 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 SSX4O60224 188 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 TMCC2O75069 709 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 NUDT7P0C024 238 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 CTHP32929 405 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 PIK3CBP42338 1070 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 CSNK2BP67870 215 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 C2orf80Q0P641 193 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 ANKRD34AQ69YU3 496 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 MTSS1LQ765P7 747 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 ZFAND1Q8TCF1 268 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 CIDECQ96AQ7 238 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 MENTQ9BUN1 341 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 B3GNT4Q9C0J1 378 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 REEP4Q9H6H4 257 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 MAGIXQ9H6Y5 334 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 TBC1D24Q9ULP9 559 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 U3KQV3 271 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 OR52A4PA6NMU1 304 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 CEACAM5P06731 702 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 GPX2P18283 190 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 ERP29P30040 261 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 IGFALSP35858 605 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 MLF2Q15773 248 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 VMACQ2NL98 169 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 TJAP1Q5JTD0 557 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 C10orf62Q5T681 223 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 ANXA8L1Q5VT79 327 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 FAM180BQ6P0A1 224 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 ZNF767PQ75MW2 155 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 NRARPQ7Z6K4 114 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 PLCZ1Q86YW0 608 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 ZZZ3Q8IYH5 903 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 MMP21Q8N119 569 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 LINC01555Q8NAE3 123 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 FLCNQ8NFG4 579 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 C16orf78Q8WTQ4 265 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 SLC7A6Q92536 515 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 COQ8BQ96D53 544 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 PYURFQ96I23 114 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 OR2A14Q96R47 310 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 SDHCQ99643 169 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 BTNL2Q9UIR0 455 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 ACSL5Q9ULC5 683 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 FZD4Q9ULV1 537 aa16.22■□□□□ 0.19
SHKBP1-205ENST00000594973 TICRRQ7Z2Z1 1910 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 MEIOCA2RUB1 952 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 SNTNA6NMZ2 147 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 AP3D1O14617 1153 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 FAM20BO75063 409 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 ZNF780AO75290 641 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 KLHL18O94889 574 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 CCNDBP1O95273 360 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 LCKP06239 509 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 PTX3P26022 381 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 PPP2CBP62714 309 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 PPP2CAP67775 309 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 HTR4Q13639 388 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 ARHGAP19Q14CB8 494 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 GPAT3Q53EU6 434 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 CAMKMTQ7Z624 323 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 PTOV1Q86YD1 416 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 ANKRD53Q8N9V6 530 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 GALNT6Q8NCL4 622 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 MAL2Q969L2 176 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 GABRG3Q99928 467 aa16.21■□□□□ 0.19
SHKBP1-205ENST00000594973 ANKDD1BA6NHY2 528 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 GPR89AB7ZAQ6 455 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 RTCAO00442 366 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 ARHGAP33O14559 1287 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 CTDSP2O14595 271 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 ARHGEF9O43307 516 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 RPLP0P05388 317 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 GPR89BP0CG08 455 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 ERGP11308 486 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 LIPAP38571 399 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 HBA1P69905 142 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 CTAG1AP78358 180 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 KRT33BQ14525 404 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 LAIR1Q6GTX8 287 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 KIAA1161Q6NSJ0 714 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 ADCK2Q7Z695 626 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 SMPDL3AQ92484 453 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 PPCDCQ96CD2 204 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 GABARAPL1Q9H0R8 117 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 CD93Q9NPY3 652 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 PRAMEF33A0A0G2JMD5 474 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 C1orf226A1L170 272 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 A8MV72 311 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 TSPAN9O75954 239 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 C6orf47O95873 294 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 IL3P08700 152 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 FURINP09958 794 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 IGFBP5P24593 272 aa16.2■□□□□ 0.18
SHKBP1-205ENST00000594973 TMEM179BQ7Z7N9 219 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms