RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 MATN1P21941 496 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 DUSP2Q05923 314 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 MAD2L1BPQ15013 274 aaPredicted RBP17.12■□□□□ 0.33
SMPD3-211ENST00000568373 ZNF750Q32MQ0 723 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 BHLHB9Q6PI77 547 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 CCDC71Q8IV32 467 aaPredicted RBP17.12■□□□□ 0.33
SMPD3-211ENST00000568373 CCDC116Q8IYX3 515 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 OR10G6Q8NH81 332 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 PATE1Q8WXA2 126 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 HRASLS5Q96KN8 279 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 OR2A5Q96R48 311 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 NODALQ96S42 347 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 DOK1Q99704 481 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 MAPKAP1Q9BPZ7 522 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 RLIMQ9NVW2 624 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 TRPC4Q9UBN4 977 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 PRAMEF27A3QJZ7 478 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 MBTPS2O43462 519 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 CTSVO60911 334 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 GADD45GO95257 159 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 JUNDP17535 347 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 CSNK2A2P19784 350 aaPredicted RBP17.12■□□□□ 0.33
SMPD3-211ENST00000568373 FMO3P31513 532 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 FEN1P39748 380 aaKnown RBP17.12■□□□□ 0.33
SMPD3-211ENST00000568373 KHKP50053 298 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 PIGFQ07326 219 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 DYNC1I2Q13409 638 aaKnown RBP17.12■□□□□ 0.33
SMPD3-211ENST00000568373 SMAD4Q13485 552 aaKnown RBP17.12■□□□□ 0.33
SMPD3-211ENST00000568373 CEBPEQ15744 281 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 GPR19Q15760 415 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 PRPF38BQ5VTL8 546 aaKnown RBP17.12■□□□□ 0.33
SMPD3-211ENST00000568373 UTP15Q8TED0 518 aaKnown RBP17.12■□□□□ 0.33
SMPD3-211ENST00000568373 XAGE5Q8WWM1 108 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 RASSF5Q8WWW0 418 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 PROX1Q92786 737 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 TM4SF19Q96DZ7 209 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 MAGED4Q96JG8 741 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 RSPO3Q9BXY4 272 aaPredicted RBP17.12■□□□□ 0.33
SMPD3-211ENST00000568373 GSDMCQ9BYG8 508 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 TCEAL2Q9H3H9 227 aaPredicted RBP17.12■□□□□ 0.33
SMPD3-211ENST00000568373 GIMAP4Q9NUV9 329 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 POT1Q9NUX5 634 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 CPNE7Q9UBL6 633 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 KCND3Q9UK17 655 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 POFUT2Q9Y2G5 429 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 SNX5Q9Y5X3 404 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 C8orf89P0DMQ9 161 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 ALPPL2P10696 532 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 PPP2R1BP30154 601 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 PTGER1P34995 402 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 PXNP49023 591 aaPredicted RBP17.11■□□□□ 0.33
SMPD3-211ENST00000568373 NUP107P57740 925 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 TUBA3CQ13748 450 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 GANABQ14697 944 aaKnown RBP17.11■□□□□ 0.33
SMPD3-211ENST00000568373 SYPL1Q16563 259 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 FCRL6Q6DN72 434 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 GPR153Q6NV75 609 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 PHF10Q8WUB8 498 aaKnown RBP17.11■□□□□ 0.33
SMPD3-211ENST00000568373 MOAP1Q96BY2 351 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 COL21A1Q96P44 957 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 PSD2Q9BQI7 771 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 AASSQ9UDR5 926 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 SCN3AQ9NY46 2000 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 A0A1W2PS29 197 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 PCDH17O14917 1159 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 SERPINB7O75635 380 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 FHP07954 510 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 NR2F6P10588 404 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 NR2F1P10589 423 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 MPIP34949 423 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 KCNJ5P48544 419 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 ANXA11P50995 505 aaKnown RBP17.11■□□□□ 0.33
SMPD3-211ENST00000568373 PRKAG1P54619 331 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 LIM2P55344 173 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 UBE2IP63279 158 aaKnown RBP17.11■□□□□ 0.33
SMPD3-211ENST00000568373 EIF2B5Q13144 721 aaKnown RBP17.11■□□□□ 0.33
SMPD3-211ENST00000568373 PROX2Q3B8N5 592 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 GTF2IRD2BQ6EKJ0 949 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 LAIR1Q6GTX8 287 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 FIGLAQ6QHK4 219 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 DGLUCYQ7Z3D6 616 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 GTF2IRD2Q86UP8 949 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 OR9Q2Q8NGE9 314 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 OR56A1Q8NGH5 318 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 ZNF681Q96N22 645 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 LHPPQ9H008 270 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 SLC2A4RGQ9NR83 387 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 ANKMY1Q9P2S6 941 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 SEC14L3Q9UDX4 400 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 TPRKBQ9Y3C4 175 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 HCN4Q9Y3Q4 1203 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 PCDHGA6Q9Y5G7 932 aa17.11■□□□□ 0.33
SMPD3-211ENST00000568373 A0A0J9YVX5 310 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 SPTY2D1-AS1A0A0U1RR47 76 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 H3BMQ9 156 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 SRFP11831 508 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 LASP1Q14847 261 aaKnown RBP17.1■□□□□ 0.33
SMPD3-211ENST00000568373 TMEM107Q6UX40 140 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 FRMD1Q8N878 549 aa17.1■□□□□ 0.33
SMPD3-211ENST00000568373 ZNF354BQ96LW1 612 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms