RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 CSO75390 466 aaKnown RBP5.45□□□□□ -1.54
SCAF11-213ENST00000550629 HSPA4LO95757 839 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 CHEK2O96017 543 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 MT-CO3P00414 261 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 KRT6AP02538 564 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 KRT6BP04259 564 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 UROSP10746 265 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 HSD3B1P14060 373 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 HGFP14210 728 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 JUPP14923 745 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 ST6GAL1P15907 406 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 BGNP21810 368 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 GCSHP23434 173 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 CSTF2P33240 577 aaKnown RBP eCLIP5.45□□□□□ -1.545e-9■■■■□ 25.1
SCAF11-213ENST00000550629 TSPAN7P41732 249 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 KRT6CP48668 564 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 PDX1P52945 283 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 ARFIP1P53367 373 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 CDH13P55290 713 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 ABCE1P61221 599 aaKnown RBP5.45□□□□□ -1.54
SCAF11-213ENST00000550629 PHEXP78562 749 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 ACY1Q03154 408 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 OCA2Q04671 838 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 ZIC1Q15915 447 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 RBBP7Q16576 425 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 TMEM35AQ53FP2 167 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 TCTE1Q5JU00 501 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 HES3Q5TGS1 186 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 FRG2Q64ET8 278 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 B3GNTL1Q67FW5 361 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-213ENST00000550629 FCRL6Q6DN72 434 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 NIPAL1Q6NVV3 410 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 MED27Q6P2C8 311 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 DHRS13Q6UX07 377 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 TMPRSS9Q7Z410 1059 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 MTERF4Q7Z6M4 381 aaKnown RBP5.45□□□□□ -1.54
SCAF11-213ENST00000550629 TMPRSS11BQ86T26 416 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 TRIM73Q86UV7 250 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 LSMEM2Q8N112 164 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 TMEM132CQ8N3T6 1108 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 DNAJC22Q8N4W6 341 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 GBP7Q8N8V2 638 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-213ENST00000550629 MFSD9Q8NBP5 474 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 TRPV3Q8NET8 790 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 OR7G3Q8NG95 312 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 OR52B6Q8NGF0 335 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 LRRC8CQ8TDW0 803 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 TRPC4APQ8TEL6 797 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 AGAP11Q8TF27 550 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 CKAP2Q8WWK9 683 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 ZNF75CPQ92670 426 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-213ENST00000550629 ATP6V1E2Q96A05 226 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 RERGQ96A58 199 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-213ENST00000550629 ESAMQ96AP7 390 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 MAGEB18Q96M61 343 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 C7orf26Q96N11 449 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 PRAP1Q96NZ9 151 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 FCRL4Q96PJ5 515 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 FRG2BQ96QU4 278 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 OR2A5Q96R48 311 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 CMKLR1Q99788 373 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 ZPBPQ9BS86 351 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 NLNQ9BYT8 704 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 ASPSCR1Q9BZE9 553 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 REXO4Q9GZR2 422 aaKnown RBP5.45□□□□□ -1.54
SCAF11-213ENST00000550629 ILKAPQ9H0C8 392 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-213ENST00000550629 SYNDIG1Q9H7V2 258 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 FANCEQ9HB96 536 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 MLXIPLQ9NP71 852 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 FBXO8Q9NRD0 319 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 THAP1Q9NVV9 213 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 SOHLH2Q9NX45 425 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 SIDT1Q9NXL6 827 aaKnown RBP5.45□□□□□ -1.54
SCAF11-213ENST00000550629 TMEM9Q9P0T7 183 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 SNX6Q9UNH7 406 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 SH2B3Q9UQQ2 575 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 RAP2CQ9Y3L5 183 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 AP1M2Q9Y6Q5 423 aa5.45□□□□□ -1.54
SCAF11-213ENST00000550629 ARHGEF17Q96PE2 2063 aaPredicted RBP5.44□□□□□ -1.54
SCAF11-213ENST00000550629 CCDC187A0A096LP49 1063 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 WDR91A4D1P6 747 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 MANBAO00462 879 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 HAT1O14929 419 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 AZIN1O14977 448 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 ZSCAN9O15535 394 aaPredicted RBP5.44□□□□□ -1.54
SCAF11-213ENST00000550629 OR1F1O43749 312 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 CRCPO75575 148 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 SERPINA6P08185 405 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 HBQ1P09105 142 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 SLC35G6P0C7Q6 338 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 FGF5P12034 268 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 PVRP15151 417 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 CD22P20273 847 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 BMP5P22003 454 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 ARL1P40616 181 aaPredicted RBP5.44□□□□□ -1.54
SCAF11-213ENST00000550629 MDH1P40925 334 aaKnown RBP5.44□□□□□ -1.54
SCAF11-213ENST00000550629 TSFMP43897 325 aaKnown RBP5.44□□□□□ -1.54
SCAF11-213ENST00000550629 GABRA4P48169 554 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 SLC1A6P48664 564 aa5.44□□□□□ -1.54
SCAF11-213ENST00000550629 ERVPABLB-1P60509 514 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms