RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 PCDHGA1Q9Y5H4 931 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 UBIAD1Q9Y5Z9 338 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 HEG1Q9ULI3 1381 aa0.28□□□□□ -2.36
COPB1-212ENST00000534771 FER1L5A0AVI2 2057 aa0.28□□□□□ -2.37
COPB1-212ENST00000534771 TENM3Q9P273 2699 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 MYO10Q9HD67 2058 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 MACROD2A1Z1Q3 448 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 A6NDX4 124 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 F5H0A9 414 aaPredicted RBP0.27□□□□□ -2.37
COPB1-212ENST00000534771 K7ERI5 159 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 CCSO14618 274 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 HTATSF1O43719 755 aaKnown RBP0.27□□□□□ -2.37
COPB1-212ENST00000534771 AIREO43918 545 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 PRAF2O60831 178 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 CSO75390 466 aaKnown RBP0.27□□□□□ -2.37
COPB1-212ENST00000534771 TSPAN9O75954 239 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 SUPT7LO94864 414 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 SLU7O95391 586 aaKnown RBP0.27□□□□□ -2.37
COPB1-212ENST00000534771 SLC2A10O95528 541 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 IGHV3-9P01782 118 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 DCNP07585 359 aaKnown RBP0.27□□□□□ -2.37
COPB1-212ENST00000534771 CELP19835 753 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 IDSP22304 550 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 CCNCP24863 283 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 ACKR3P25106 362 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 HOXD10P28358 340 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 PTPN4P29074 926 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 CDX1P47902 265 aaPredicted RBP0.27□□□□□ -2.37
COPB1-212ENST00000534771 RGS7P49802 495 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 LIG4P49917 911 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 SLC7A2P52569 658 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 MFAP3P55082 362 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 NUP107P57740 925 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 MC1RQ01726 317 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 ACSM1Q08AH1 577 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 ABRQ12979 859 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 LCP2Q13094 533 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 SLAQ13239 276 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 GGTLC2Q14390 218 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 KCTD2Q14681 263 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 ZNF630Q2M218 657 aaPredicted RBP0.27□□□□□ -2.37
COPB1-212ENST00000534771 ACER2Q5QJU3 275 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 PRR9Q5T870 116 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 SULT1C3Q6IMI6 304 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 APOOLQ6UXV4 268 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 OTOAQ7RTW8 1153 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 HMGN2P46Q86SG4 172 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 UNC5CLQ8IV45 518 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 APCDD1Q8J025 514 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 TTC5Q8N0Z6 440 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 TAGAPQ8N103 731 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 GVQW1Q8N7I0 195 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 TMEM99Q8N816 258 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 ZNF709Q8N972 641 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 SYT2Q8N9I0 419 aaPredicted RBP0.27□□□□□ -2.37
COPB1-212ENST00000534771 TC2NQ8N9U0 490 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 Q8N9W7 124 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 OR10H4Q8NGA5 316 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 OR2L8Q8NGY9 312 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 ZNF596Q8TC21 504 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 GPR148Q8TDV2 347 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 SECISBP2LQ93073 1101 aaKnown RBP0.27□□□□□ -2.37
COPB1-212ENST00000534771 MYDGFQ969H8 173 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 RAB3CQ96E17 227 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 RSRC1Q96IZ7 334 aaKnown RBP0.27□□□□□ -2.37
COPB1-212ENST00000534771 AK8Q96MA6 479 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 PPM1MQ96MI6 270 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 ZNF641Q96N77 438 aaPredicted RBP0.27□□□□□ -2.37
COPB1-212ENST00000534771 PLA2G2FQ9BZM2 168 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 TRIM9Q9C026 710 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 NXF3Q9H4D5 531 aaKnown RBP0.27□□□□□ -2.37
COPB1-212ENST00000534771 ZNF586Q9NXT0 402 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 MARCOQ9UEW3 520 aaPredicted RBP0.27□□□□□ -2.37
COPB1-212ENST00000534771 ZNF229Q9UJW7 825 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 GMEB2Q9UKD1 530 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 SCML2Q9UQR0 700 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 CLCA3PQ9Y6N3 262 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.27□□□□□ -2.37
COPB1-212ENST00000534771 NLRC5Q86WI3 1866 aa0.27□□□□□ -2.37
COPB1-212ENST00000534771 CHD4Q14839 1912 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 TCRBV21S2A2A0A5A6 115 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 NKX2-6A6NCS4 301 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 GLOD5A6NK44 160 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 ZNF233A6NK53 670 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 TMEM110-MUSTN1A8MSY1 372 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 AGAP14A8MT82 685 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 SLC17A2O00624 439 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 KIAA0513O60268 411 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 ENTPD3O75355 529 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 GRAP2O75791 330 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 NOL4O94818 638 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 CELF2O95319 508 aaKnown RBP0.26□□□□□ -2.37
COPB1-212ENST00000534771 MOCS2O96007 188 aaPredicted RBP0.26□□□□□ -2.37
COPB1-212ENST00000534771 MMP1P03956 469 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 IGHV4-34P06331 123 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 ABCB1P08183 1280 aaPredicted RBP0.26□□□□□ -2.37
COPB1-212ENST00000534771 MRPL3P09001 348 aaKnown RBP0.26□□□□□ -2.37
COPB1-212ENST00000534771 ALPIP09923 528 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 H2AFZP0C0S5 128 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 CSH1P0DML2 217 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms