RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 SP5Q6BEB4 398 aaPredicted RBP9.81□□□□□ -0.84
NELFE-213ENST00000494956 METTL2BQ6P1Q9 378 aaKnown RBP9.81□□□□□ -0.84
NELFE-213ENST00000494956 SCIMPQ6UWF3 145 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 COMMD6Q7Z4G1 85 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 CD163Q86VB7 1156 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 DOLPP1Q86YN1 238 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 ST13P4Q8IZP2 240 aaPredicted RBP9.81□□□□□ -0.84
NELFE-213ENST00000494956 METTL4Q8N3J2 472 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 RPRMLQ8N4K4 120 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 SIMC1Q8NDZ2 872 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 OR5M3Q8NGP4 307 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 C16orf52Q8NHV5 167 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 RIT1Q92963 219 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 FBXL20Q96IG2 436 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 KCNA7Q96RP8 456 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 C1QTNF3Q9BXJ4 246 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 ELOVL6Q9H5J4 265 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 TUBA8Q9NY65 449 aaPredicted RBP9.81□□□□□ -0.84
NELFE-213ENST00000494956 PSD3Q9NYI0 1048 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 SUCOQ9UBS9 1254 aaKnown RBP9.81□□□□□ -0.84
NELFE-213ENST00000494956 EMCNQ9ULC0 261 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 TMCO1Q9UM00 188 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 MEMO1Q9Y316 297 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 TIMM22Q9Y584 194 aa9.81□□□□□ -0.84
NELFE-213ENST00000494956 IQANK1A0A1B0GTG1 560 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 C19orf84I3L1E1 186 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 MANBAO00462 879 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 SEMA3DO95025 777 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 MLYCDO95822 493 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 OTCP00480 354 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 TPOP07202 933 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 ARFIP1P53367 373 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 CASP6P55212 293 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 SLC37A1P57057 533 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 PPIAP62937 165 aaKnown RBP9.8□□□□□ -0.84
NELFE-213ENST00000494956 TBL3Q12788 808 aaKnown RBP9.8□□□□□ -0.84
NELFE-213ENST00000494956 EBPQ15125 230 aaKnown RBP9.8□□□□□ -0.84
NELFE-213ENST00000494956 SPRED3Q2MJR0 410 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 ZNF791Q3KP31 576 aaPredicted RBP9.8□□□□□ -0.84
NELFE-213ENST00000494956 LGSNQ5TDP6 509 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 OR52E8Q6IFG1 317 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 FAM111BQ6SJ93 734 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 RNF111Q6ZNA4 994 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 RTL4Q6ZR62 310 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 FAM47EQ6ZV65 393 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 MARVELD2Q8N4S9 558 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 C1orf52Q8N6N3 182 aaKnown RBP9.8□□□□□ -0.84
NELFE-213ENST00000494956 OR5L2Q8NGL0 311 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 OR8K3Q8NH51 312 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 NUBPLQ8TB37 319 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 EPS8L3Q8TE67 593 aaKnown RBP9.8□□□□□ -0.84
NELFE-213ENST00000494956 UBLCP1Q8WVY7 318 aaPredicted RBP9.8□□□□□ -0.84
NELFE-213ENST00000494956 TM4SF18Q96CE8 201 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 TTTY12Q9BZ98 90 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 WWTR1Q9GZV5 400 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 WDR41Q9HAD4 459 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 PSMC3IPQ9P2W1 217 aaPredicted RBP9.8□□□□□ -0.84
NELFE-213ENST00000494956 TRPS1Q9UHF7 1281 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 PPT2Q9UMR5 302 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 DTX4Q9Y2E6 619 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 CRYBG3Q68DQ2 2970 aa9.8□□□□□ -0.84
NELFE-213ENST00000494956 CACNA1CQ13936 2221 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 NBPF19A0A087WUL8 3843 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 CDK2AP1O14519 115 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 UBFD1O14562 309 aaKnown RBP9.79□□□□□ -0.84
NELFE-213ENST00000494956 NME6O75414 186 aaPredicted RBP9.79□□□□□ -0.84
NELFE-213ENST00000494956 ERAL1O75616 437 aaKnown RBP9.79□□□□□ -0.84
NELFE-213ENST00000494956 RFPL3SP0C7P2 107 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 SLC35E2P0CK97 266 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 TAC1P20366 129 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 CNR1P21554 472 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 NT5EP21589 574 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 ATP5F1P24539 256 aaPredicted RBP9.79□□□□□ -0.84
NELFE-213ENST00000494956 PIK3R1P27986 724 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 HTR1EP28566 365 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 PTGS2P35354 604 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 SOX18P35713 384 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 FEN1P39748 380 aaKnown RBP9.79□□□□□ -0.84
NELFE-213ENST00000494956 MAGEA5P43359 124 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 XKP51811 444 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 MAPK12P53778 367 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 PRKAA2P54646 552 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 FOXA1P55317 472 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 RAE1P78406 368 aaKnown RBP9.79□□□□□ -0.84
NELFE-213ENST00000494956 HMGCS1Q01581 520 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 FOXO1Q12778 655 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 EXOSC7Q15024 291 aaKnown RBP9.79□□□□□ -0.84
NELFE-213ENST00000494956 LTB4RQ15722 352 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 NNATQ16517 81 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 MPEG1Q2M385 716 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.79□□□□□ -0.848e-9■■■■□ 19.8
NELFE-213ENST00000494956 EMC4Q5J8M3 183 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 BICRALQ6AI39 1079 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 DESI1Q6ICB0 168 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 OPN5Q6U736 354 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 GPALPP1Q8IXQ4 340 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 PRR22Q8IZ63 422 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 ZNF808Q8N4W9 903 aaPredicted RBP9.79□□□□□ -0.84
NELFE-213ENST00000494956 TMEM251Q8N6I4 163 aa9.79□□□□□ -0.84
NELFE-213ENST00000494956 POGLUT1Q8NBL1 392 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms