RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 NABP1Q96AH0 204 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 PSMB7Q99436 277 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 OCR1Q9BZK8 76 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 DCTPP1Q9H773 170 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 JPT2Q9H910 190 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 HPS4Q9NQG7 708 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 DNPEPQ9ULA0 475 aa3.76□□□□□ -1.81
SMNDC1-205ENST00000477763 TRBV5-4A0A0C4DH59 114 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 RNF103-CHMP3A0A140T963 221 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 ZNF724A8MTY0 619 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 ARPC1BO15143 372 aaKnown RBP3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 REC8O95072 547 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 PDGFBP01127 241 aaPredicted RBP3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 SLC4A1P02730 911 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 ALPPP05187 535 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 FCER2P06734 321 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 PGK2P07205 417 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 ALPPL2P10696 532 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 SPRP35270 261 aaPredicted RBP3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 SLC1A4P43007 532 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 MTIF2P46199 727 aaKnown RBP3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 NUMBP49757 651 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 ZNF131P52739 623 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 GSTO1P78417 241 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 GAMTQ14353 236 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 PDK1Q15118 436 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 SHROOM1Q2M3G4 852 aaPredicted RBP3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 POM121L1PQ3SYA9 428 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 EPC2Q52LR7 807 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 CMPK2Q5EBM0 449 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 DCAF12Q5T6F0 453 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 NEK5Q6P3R8 708 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 PAQR6Q6TCH4 344 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 CWC27Q6UX04 472 aaKnown RBP3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 ASRGL1Q7L266 308 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 ABHD12Q8N2K0 398 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 ZNF781Q8N8C0 355 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 SAMD12Q8N8I0 201 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 RDH11Q8TC12 318 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 SSC4DQ8WTU2 575 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 TMEM186Q96B77 213 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 ZNF597Q96LX8 424 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 NSMCE2Q96MF7 247 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 TMEM237Q96Q45 408 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 ATOH8Q96SQ7 321 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 COQ7Q99807 217 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 UBXN6Q9BZV1 441 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 LRRCC1Q9C099 1032 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 XPO4Q9C0E2 1151 aaKnown RBP3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 NACA2Q9H009 215 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 NT5DC2Q9H857 520 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 HEXA-AS1Q9H8Q6 139 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 SLC25A19Q9HC21 320 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 PAK5Q9P286 719 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 EIF3KQ9UBQ5 218 aaKnown RBP3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 TUBGCP4Q9UGJ1 667 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 ENTPD4Q9Y227 616 aa3.75□□□□□ -1.81
SMNDC1-205ENST00000477763 CFAP73A6NFT4 308 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 RNF212BA8MTL3 300 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 K7EQG2 157 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 DUSP11O75319 330 aaKnown RBP3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 SEC22BO75396 215 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 SYNGR4O95473 234 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 IGHG1P01857 330 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 CALML3P27482 149 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 SFNP31947 248 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 ATP4BP51164 291 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 NDST1P52848 882 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 STARD6P59095 220 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 CD300CQ08708 224 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 EMC2Q15006 297 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 AGAP7PQ5VUJ5 663 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 LIPJQ5W064 366 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 ZNF343Q6P1L6 599 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 CNSTQ6PJW8 725 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 MFSD7Q6UXD7 560 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 TMUB2Q71RG4 321 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 NUFIP2Q7Z417 695 aaKnown RBP3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 RPAINQ86UA6 219 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 LMNTD2Q8IXW0 634 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 C4orf32Q8N8J7 132 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 COLGALT1Q8NBJ5 622 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 BEST4Q8NFU0 473 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 OR52E1Q8NGJ3 308 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 OR1K1Q8NGR3 316 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 RASL10AQ92737 203 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 COG3Q96JB2 828 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 HSD17B14Q9BPX1 270 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 ZNF577Q9BSK1 485 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 RBM24Q9BX46 236 aaKnown RBP3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 FTHL17Q9BXU8 183 aa3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 ELL3Q9HB65 397 aaPredicted RBP3.74□□□□□ -1.81
SMNDC1-205ENST00000477763 PCNX3Q9H6A9 2034 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 IGKV3D-20A0A0C4DH25 116 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 SH2D1BO14796 132 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 CFLARO15519 480 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 TXNL1O43396 289 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 SSX5O60225 188 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 FRAT2O75474 233 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms