RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 FOLH1BQ9HBA9 442 aa5.8□□□□□ -1.48
HDAC3-206ENST00000471968 G6PC2Q9NQR9 355 aa5.8□□□□□ -1.48
HDAC3-206ENST00000471968 RPUSD1Q9UJJ7 312 aaKnown RBP5.8□□□□□ -1.48
HDAC3-206ENST00000471968 CORO1CQ9ULV4 474 aaPredicted RBP5.8□□□□□ -1.48
HDAC3-206ENST00000471968 EMC9Q9Y3B6 208 aa5.8□□□□□ -1.48
HDAC3-206ENST00000471968 SLC22A7Q9Y694 548 aa5.8□□□□□ -1.48
HDAC3-206ENST00000471968 CLCA3PQ9Y6N3 262 aa5.8□□□□□ -1.48
HDAC3-206ENST00000471968 ALMS1Q8TCU4 4167 aa5.8□□□□□ -1.48
HDAC3-206ENST00000471968 TRAV20A0A0B4J274 112 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 LOC285095A0A1B0GVY8 99 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 SYCE3A1L190 88 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 ANKRD33BA6NCL7 494 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 H7BY64 318 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 CCDC188H7C350 402 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 REM1O75628 298 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 SLU7O95391 586 aaKnown RBP5.79□□□□□ -1.48
HDAC3-206ENST00000471968 C1orf105O95561 183 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 IFNA16P05015 189 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 SLC35E2P0CK97 266 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 PFKFB1P16118 471 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 CHRNB2P17787 502 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 DDX5P17844 614 aaKnown RBP5.79□□□□□ -1.48
HDAC3-206ENST00000471968 SERPINB3P29508 390 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 MC4RP32245 332 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 GFRA1P56159 465 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 WNT3AP56704 352 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 SLC37A1P57057 533 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 IFI35P80217 286 aaPredicted RBP5.79□□□□□ -1.48
HDAC3-206ENST00000471968 CDR2Q01850 454 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 TCHHL1Q5QJ38 904 aaPredicted RBP5.79□□□□□ -1.48
HDAC3-206ENST00000471968 TIGD3Q6B0B8 471 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 AAGABQ6PD74 315 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 MON1BQ7L1V2 547 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 STK32CQ86UX6 486 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 IFNEQ86WN2 208 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 ZNF677Q86XU0 584 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 PHF13Q86YI8 300 aaPredicted RBP5.79□□□□□ -1.48
HDAC3-206ENST00000471968 OR6K3Q8NGY3 331 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 SLC13A3Q8WWT9 602 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 FBXO17Q96EF6 278 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 ZNF48Q96MX3 618 aaPredicted RBP5.79□□□□□ -1.48
HDAC3-206ENST00000471968 PRAP1Q96NZ9 151 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 PCDHB18PQ96TA0 734 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 PINK1Q9BXM7 581 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 HDHD5Q9BXW7 423 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 PCDH18Q9HCL0 1135 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 SLC52A3Q9NQ40 469 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 SMYD2Q9NRG4 433 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 TEX10Q9NXF1 929 aaPredicted RBP5.79□□□□□ -1.48
HDAC3-206ENST00000471968 ASH2LQ9UBL3 628 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 MAN1B1Q9UKM7 699 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 CLEC4AQ9UMR7 237 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 ZNF148Q9UQR1 794 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 RNF114Q9Y508 228 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 DNAH10Q8IVF4 4471 aa5.79□□□□□ -1.48
HDAC3-206ENST00000471968 HEATR5BQ9P2D3 2071 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 MYOCOSA0A1B0GUC4 107 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 WI2-2373I1.2A0A1W2PRP0 233 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 FAM181BA6NEQ2 426 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 NRDCO43847 1150 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 CCNDBP1O95273 360 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 CRYBA1P05813 215 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 FBXO45P0C2W1 286 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 RNH1P13489 461 aaKnown RBP5.78□□□□□ -1.48
HDAC3-206ENST00000471968 DAOP14920 347 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 IFNGR1P15260 489 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 TCF4P15884 667 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 ALOX12P18054 663 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 CHRM3P20309 590 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 TCEA1P23193 301 aaKnown RBP5.78□□□□□ -1.48
HDAC3-206ENST00000471968 CCR7P32248 378 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 MSH2P43246 934 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 CTBP2P56545 445 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 RPS15AP62244 130 aaKnown RBP5.78□□□□□ -1.48
HDAC3-206ENST00000471968 SKP1P63208 163 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 RELBQ01201 579 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 TNFRSF17Q02223 184 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 GBE1Q04446 702 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 PAFAH1B3Q15102 231 aaKnown RBP5.78□□□□□ -1.48
HDAC3-206ENST00000471968 PON3Q15166 354 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 TAF1AQ15573 450 aaPredicted RBP5.78□□□□□ -1.48
HDAC3-206ENST00000471968 ELAVL1Q15717 326 aaKnown RBP5.78□□□□□ -1.48
HDAC3-206ENST00000471968 SLC1A5Q15758 541 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 STK11Q15831 433 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 NRN1LQ496H8 165 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 GPR33Q49SQ1 333 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 ZFAND6Q6FIF0 208 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 Q6ZSR9 355 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 SLC46A3Q7Z3Q1 461 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 ASPGQ86U10 573 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 DND1Q8IYX4 353 aaKnown RBP5.78□□□□□ -1.48
HDAC3-206ENST00000471968 BCL6BQ8N143 479 aaPredicted RBP5.78□□□□□ -1.48
HDAC3-206ENST00000471968 AFAP1L2Q8N4X5 818 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 ZNF740Q8NDX6 193 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 OR1J4Q8NGS1 313 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 CLDND2Q8NHS1 167 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 SKA2Q8WVK7 121 aaPredicted RBP5.78□□□□□ -1.48
HDAC3-206ENST00000471968 SMPDL3AQ92484 453 aa5.78□□□□□ -1.48
HDAC3-206ENST00000471968 DAZLQ92904 295 aaKnown RBP5.78□□□□□ -1.48
HDAC3-206ENST00000471968 TM4SF19Q96DZ7 209 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms