RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 NXNL1Q96CM4 212 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 GAL3ST4Q96RP7 486 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 PROK2Q9HC23 129 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 LYARQ9NX58 379 aaKnown RBP20.96■□□□□ 0.95
USP42-205ENST00000465073 B4GALT7Q9UBV7 327 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 L3MBTL1Q9Y468 752 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 CHCHD2Q9Y6H1 151 aaPredicted RBP20.96■□□□□ 0.95
USP42-205ENST00000465073 OR6C76A6NM76 312 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 DNAJA1P31689 397 aaKnown RBP20.95■□□□□ 0.94
USP42-205ENST00000465073 GALNSP34059 522 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 SLC37A1P57057 533 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 HERVK_113P63132 956 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 ERVK-8P63133 956 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 CAV1Q03135 178 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 NAB1Q13506 487 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 MRM1Q6IN84 353 aaKnown RBP20.95■□□□□ 0.94
USP42-205ENST00000465073 ARSKQ6UWY0 536 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 RNF111Q6ZNA4 994 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 OR10G3Q8NGC4 313 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 NEIL3Q8TAT5 605 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 FBF1Q8TES7 1133 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 REPS1Q96D71 796 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 ERVK-6Q9BXR3 956 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 WWTR1Q9GZV5 400 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 DDX31Q9H8H2 851 aaKnown RBP20.95■□□□□ 0.94
USP42-205ENST00000465073 ACTR8Q9H981 624 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 ERVK-19Q9WJR5 959 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 ASB4Q9Y574 426 aa20.95■□□□□ 0.94
USP42-205ENST00000465073 LRRC3CA6NJW4 275 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 H0YIV9 168 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 UGDHO60701 494 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 PRKRAO75569 313 aaKnown RBP20.94■□□□□ 0.94
USP42-205ENST00000465073 MAGEA4P43358 317 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 PLTPP55058 493 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 RPS13P62277 151 aaKnown RBP20.94■□□□□ 0.94
USP42-205ENST00000465073 CUL3Q13618 768 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 SETDB1Q15047 1291 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 FAM83EQ2M2I3 478 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 PIAS4Q8N2W9 510 aaPredicted RBP20.94■□□□□ 0.94
USP42-205ENST00000465073 DOK4Q8TEW6 326 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 ZNF717Q9BY31 904 aaPredicted RBP20.94■□□□□ 0.94
USP42-205ENST00000465073 WDR41Q9HAD4 459 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 PSD3Q9NYI0 1048 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 CNOT11Q9UKZ1 510 aaKnown RBP20.94■□□□□ 0.94
USP42-205ENST00000465073 UTP11Q9Y3A2 253 aaKnown RBP20.94■□□□□ 0.94
USP42-205ENST00000465073 A0A087X1B8 175 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 A0A0A6YYD5 115 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 A0A1W2PR48 441 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 EEDO75530 441 aaKnown RBP20.94■□□□□ 0.94
USP42-205ENST00000465073 FAM58BPP0C7Q3 252 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 NR2F6P10588 404 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 BSGP35613 385 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 EBPQ15125 230 aaKnown RBP20.94■□□□□ 0.94
USP42-205ENST00000465073 NTRK2Q16620 822 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 TBCELQ5QJ74 424 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 CYP20A1Q6UW02 462 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 WDR53Q7Z5U6 358 aaPredicted RBP20.94■□□□□ 0.94
USP42-205ENST00000465073 CCDC25Q86WR0 208 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 ULK2Q8IYT8 1036 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 TAGAPQ8N103 731 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 LIX1Q8N485 282 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 KCTD4Q8WVF5 259 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 JSRP1Q96MG2 331 aaPredicted RBP20.94■□□□□ 0.94
USP42-205ENST00000465073 DOHHQ9BU89 302 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 SLC6A15Q9H2J7 730 aa20.94■□□□□ 0.94
USP42-205ENST00000465073 DNAJB12Q9NXW2 375 aaKnown RBP20.94■□□□□ 0.94
USP42-205ENST00000465073 NF1P21359 2839 aa20.93■□□□□ 0.94
USP42-205ENST00000465073 ANKRD33BA6NCL7 494 aa20.93■□□□□ 0.94
USP42-205ENST00000465073 WASHC1A8K0Z3 465 aa20.93■□□□□ 0.94
USP42-205ENST00000465073 HSPB2A8KAH6 182 aa20.93■□□□□ 0.94
USP42-205ENST00000465073 CAPN14A8MX76 684 aa20.93■□□□□ 0.94
USP42-205ENST00000465073 TMPRSS11DO60235 418 aa20.93■□□□□ 0.94
USP42-205ENST00000465073 SLC35E2P0CK97 266 aa20.93■□□□□ 0.94
USP42-205ENST00000465073 GFAPP14136 432 aa20.93■□□□□ 0.94
USP42-205ENST00000465073 PEX19P40855 299 aa20.93■□□□□ 0.94
USP42-205ENST00000465073 ALDH18A1P54886 795 aaKnown RBP20.93■□□□□ 0.94
USP42-205ENST00000465073 HSPB2Q16082 182 aa20.93■□□□□ 0.94
USP42-205ENST00000465073 PFKFB4Q16877 469 aa20.93■□□□□ 0.94
USP42-205ENST00000465073 CENPLQ8N0S6 344 aaPredicted RBP20.93■□□□□ 0.94
USP42-205ENST00000465073 ITPR3Q14573 2671 aa20.92■□□□□ 0.94
USP42-205ENST00000465073 GLOD5A6NK44 160 aa20.92■□□□□ 0.94
USP42-205ENST00000465073 CTAG2O75638 210 aa20.92■□□□□ 0.94
USP42-205ENST00000465073 ACAP2Q15057 778 aa20.92■□□□□ 0.94
USP42-205ENST00000465073 PCBP2Q15366 365 aaKnown RBP eCLIP20.92■□□□□ 0.941e-8■■□□□ 14.3
USP42-205ENST00000465073 CPSF6Q16630 551 aaKnown RBP eCLIP20.92■□□□□ 0.94
USP42-205ENST00000465073 FBXO25Q8TCJ0 367 aa20.92■□□□□ 0.94
USP42-205ENST00000465073 NRGNQ92686 78 aa20.92■□□□□ 0.94
USP42-205ENST00000465073 TP53INP1Q96A56 240 aa20.92■□□□□ 0.94
USP42-205ENST00000465073 C2orf92A0A1B0GVN3 265 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 AHRRA9YTQ3 701 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 FOXE1O00358 373 aaPredicted RBP20.91■□□□□ 0.94
USP42-205ENST00000465073 SYT5O00445 386 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 TP53I11O14683 189 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 TRIM3O75382 744 aaPredicted RBP20.91■□□□□ 0.94
USP42-205ENST00000465073 C2P06681 752 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 KIR2DL3P43628 341 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 PIK3CGP48736 1102 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 TRPC1P48995 793 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 IST1P53990 364 aa20.91■□□□□ 0.94
USP42-205ENST00000465073 GTF2H2Q13888 395 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms