RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 OR7A2PQ8NGA2 310 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 OR9I1Q8NGQ6 314 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 OR2Y1Q8NGV0 311 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 ANKRD9Q96BM1 317 aaPredicted RBP18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 SOX17Q9H6I2 414 aaPredicted RBP18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 SLC35C2Q9NQQ7 365 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 C5AR2Q9P296 337 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 KCND3Q9UK17 655 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 UTS2RQ9UKP6 389 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 MKL2Q9ULH7 1088 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 FARSAQ9Y285 508 aaKnown RBP18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 PCDHGA6Q9Y5G7 932 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 MRPS18BQ9Y676 258 aaKnown RBP18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 CACNA1BQ00975 2339 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 CROCCQ5TZA2 2017 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 IGKV3D-11A0A0A0MRZ8 115 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 FAM234BA2RU67 622 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 SYNDIG1LA6NDD5 238 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 IDSB3KWA1 339 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 FGF17O60258 216 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 LDB3O75112 727 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 GPR75O95800 540 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 ZFP36L2P47974 494 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 EFNA3P52797 238 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 FOLH1Q04609 750 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 SRSF11Q05519 484 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 UBAP2LQ14157 1087 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 CEBPEQ15744 281 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 PRSS53Q2L4Q9 553 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 ZNF385BQ569K4 471 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 CPTPQ5TA50 214 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 FUNDC1Q8IVP5 155 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 SAMD14Q8IZD0 417 aaPredicted RBP18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 OR4K14Q8NGD5 310 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 OR8J2Q8NGG1 315 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 NUDT8Q8WV74 236 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 KLHL29Q96CT2 875 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 ATAD3AQ9NVI7 634 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 SH3BP4Q9P0V3 963 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 PTRH2Q9Y3E5 179 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 CCDC88CQ9P219 2028 aa18.61■□□□□ 0.57
PDLIM2-221ENST00000622702 OR2W5A6NFC9 320 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 PIK3R1P27986 724 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 PTPN4P29074 926 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 POLR2JP52435 117 aaKnown RBP18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 EMP2P54851 167 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 FOXL2P58012 376 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 KLF10Q13118 480 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 BIKQ13323 160 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 RCAN2Q14206 197 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 AGKQ53H12 422 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 MFSD4BQ5TF39 518 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 ANKRD26P1Q6NSI1 321 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 BLOC1S3Q6QNY0 202 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 SHISA6Q6ZSJ9 500 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 NATD1Q8N6N6 113 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 EXOSC8Q96B26 276 aaKnown RBP18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 CNRIP1Q96F85 164 aaPredicted RBP18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 ZNF681Q96N22 645 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 PTCHD1Q96NR3 888 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 LRRC37BQ96QE4 947 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 CRB3Q9BUF7 120 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 BHLHE41Q9C0J9 482 aaPredicted RBP18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 CCDC167Q9P0B6 97 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 C3orf18Q9UK00 162 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 TCFL5Q9UL49 500 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 ZNF780BQ9Y6R6 833 aa18.6■□□□□ 0.57
PDLIM2-221ENST00000622702 C9JVG2 144 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 TGFBR3LH3BV60 316 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 ERAL1O75616 437 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 IL6P05231 212 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 HEXBP07686 556 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 UMODP07911 640 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 LAMP1P11279 417 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 MAOAP21397 527 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 FOLR3P41439 243 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 KIR3DL1P43629 444 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 STX4Q12846 297 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 SERTAD2Q14140 314 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 MPEG1Q2M385 716 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 FAM174BQ3ZCQ3 159 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 SPANXN4Q5MJ08 99 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 GPR155Q7Z3F1 870 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 TMEM151BQ8IW70 566 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 OR4N5Q8IXE1 308 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 SNRNP27Q8WVK2 155 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 CCDC106Q9BWC9 280 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 NECTIN3Q9NQS3 549 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 SEMA3GQ9NS98 782 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 GIMAP4Q9NUV9 329 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 ARMCX1Q9P291 453 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 LHX6Q9UPM6 363 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 ENTPD4Q9Y227 616 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 CAPN7Q9Y6W3 813 aa18.59■□□□□ 0.57
PDLIM2-221ENST00000622702 TCRBV16S1A1N1A0A5B0 115 aa18.58■□□□□ 0.57
PDLIM2-221ENST00000622702 PCDH17O14917 1159 aa18.58■□□□□ 0.57
PDLIM2-221ENST00000622702 ALOX12BO75342 701 aa18.58■□□□□ 0.57
PDLIM2-221ENST00000622702 CPMP14384 443 aa18.58■□□□□ 0.57
PDLIM2-221ENST00000622702 S100A3P33764 101 aa18.58■□□□□ 0.57
PDLIM2-221ENST00000622702 FRKP42685 505 aaPredicted RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms