RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 CXorf67Q86X51 503 aaPredicted RBP15.96■□□□□ 0.15
RETREG3-210ENST00000590541 CIARTQ8N365 385 aaPredicted RBP15.96■□□□□ 0.15
RETREG3-210ENST00000590541 FBXW8Q8N3Y1 598 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 KIAA1191Q96A73 305 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 COX4I2Q96KJ9 171 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 ZNF703Q9H7S9 590 aaPredicted RBP15.96■□□□□ 0.15
RETREG3-210ENST00000590541 CAB39LQ9H9S4 337 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 WWOXQ9NZC7 414 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 ZNF629Q9UEG4 869 aaPredicted RBP15.96■□□□□ 0.15
RETREG3-210ENST00000590541 MTRF1LQ9UGC7 380 aaKnown RBP15.96■□□□□ 0.15
RETREG3-210ENST00000590541 CLCA3PQ9Y6N3 262 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 A0A088AWK7 358 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 MYOCOSA0A1B0GUC4 107 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 CLCA1A8K7I4 914 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 CLGNO14967 610 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 PHGDHO43175 533 aaKnown RBP15.95■□□□□ 0.14
RETREG3-210ENST00000590541 PIAS1O75925 651 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 EPPINO95925 133 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 S100BP04271 92 aaPredicted RBP15.95■□□□□ 0.14
RETREG3-210ENST00000590541 ZNF10P21506 573 aaPredicted RBP15.95■□□□□ 0.14
RETREG3-210ENST00000590541 ZNF136P52737 540 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 RNF4P78317 190 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 GUCY2DQ02846 1103 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 OPN5Q6U736 354 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 TMIGD1Q6UXZ0 262 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 SLCO4C1Q6ZQN7 724 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 PPM1NQ8N819 430 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 FAM47BQ8NA70 645 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 PDPRQ8NCN5 879 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 MORN4Q8NDC4 146 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 OR8K3Q8NH51 312 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 STAG3L4Q8TBR4 150 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 GAL3ST3Q96A11 431 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 NPLQ9BXD5 320 aaPredicted RBP15.95■□□□□ 0.14
RETREG3-210ENST00000590541 SLC6A15Q9H2J7 730 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 NMRAL1Q9HBL8 299 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 SH2D2AQ9NP31 389 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 DNAJC11Q9NVH1 559 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.95■□□□□ 0.14
RETREG3-210ENST00000590541 NCKAP5O14513 1909 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 CSPG4Q6UVK1 2322 aa15.95■□□□□ 0.14
RETREG3-210ENST00000590541 NCF1BA6NI72 391 aaPredicted RBP15.94■□□□□ 0.14
RETREG3-210ENST00000590541 NCF1CA8MVU1 366 aaPredicted RBP15.94■□□□□ 0.14
RETREG3-210ENST00000590541 STK16O75716 305 aa15.94■□□□□ 0.14
RETREG3-210ENST00000590541 URI1O94763 535 aaPredicted RBP15.94■□□□□ 0.14
RETREG3-210ENST00000590541 HRGP04196 525 aa15.94■□□□□ 0.14
RETREG3-210ENST00000590541 IFNA16P05015 189 aa15.94■□□□□ 0.14
RETREG3-210ENST00000590541 NCF1P14598 390 aaPredicted RBP15.94■□□□□ 0.14
RETREG3-210ENST00000590541 LAPTM5Q13571 262 aa15.94■□□□□ 0.14
RETREG3-210ENST00000590541 ACSF3Q4G176 576 aaPredicted RBP15.94■□□□□ 0.14
RETREG3-210ENST00000590541 RAPH1Q70E73 1250 aa15.94■□□□□ 0.14
RETREG3-210ENST00000590541 TBC1D1Q86TI0 1168 aaPredicted RBP15.94■□□□□ 0.14
RETREG3-210ENST00000590541 ZNF595Q8IYB9 648 aa15.94■□□□□ 0.14
RETREG3-210ENST00000590541 LRRN4CLQ8ND94 238 aa15.94■□□□□ 0.14
RETREG3-210ENST00000590541 NEIL3Q8TAT5 605 aa15.94■□□□□ 0.14
RETREG3-210ENST00000590541 FBF1Q8TES7 1133 aa15.94■□□□□ 0.14
RETREG3-210ENST00000590541 DAZLQ92904 295 aaKnown RBP15.94■□□□□ 0.14
RETREG3-210ENST00000590541 FAR2Q96K12 515 aa15.94■□□□□ 0.14
RETREG3-210ENST00000590541 CSF3RQ99062 836 aa15.94■□□□□ 0.14
RETREG3-210ENST00000590541 OR8D2Q9GZM6 311 aa15.94■□□□□ 0.14
RETREG3-210ENST00000590541 ACKR4Q9NPB9 350 aa15.94■□□□□ 0.14
RETREG3-210ENST00000590541 CD274Q9NZQ7 290 aa15.94■□□□□ 0.14
RETREG3-210ENST00000590541 PTBP2Q9UKA9 531 aaKnown RBP15.94■□□□□ 0.14
RETREG3-210ENST00000590541 RNF112Q9ULX5 631 aa15.94■□□□□ 0.14
RETREG3-210ENST00000590541 SYNDIG1LA6NDD5 238 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 ANKDD1BA6NHY2 528 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 LRRC3CA6NJW4 275 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 CYR61O00622 381 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 CLEC3AO75596 197 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 GOSR1O95249 250 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 HNRNPH1P31943 449 aaKnown RBP15.93■□□□□ 0.14
RETREG3-210ENST00000590541 PHBP35232 272 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 TIMP3P35625 211 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 GDF5P43026 501 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 PAGE2BQ5JRK9 111 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 KIF18BQ86Y91 864 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 RELL1Q8IUW5 271 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 LRRC25Q8N386 305 aaPredicted RBP15.93■□□□□ 0.14
RETREG3-210ENST00000590541 VWA5B2Q8N398 1253 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 MNS1Q8NEH6 495 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 OR14A16Q8NHC5 309 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 MS4A6EQ96DS6 147 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 WDR34Q96EX3 536 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 PTCD3Q96EY7 689 aaKnown RBP15.93■□□□□ 0.14
RETREG3-210ENST00000590541 C16orf45Q96MC5 204 aaPredicted RBP15.93■□□□□ 0.14
RETREG3-210ENST00000590541 QRFPRQ96P65 431 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 LRRC1Q9BTT6 524 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 EFCAB11Q9BUY7 163 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 PROK2Q9HC23 129 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 VTI1BQ9UEU0 232 aa15.93■□□□□ 0.14
RETREG3-210ENST00000590541 FBN1P35555 2871 aaKnown RBP15.93■□□□□ 0.14
RETREG3-210ENST00000590541 AHRRA9YTQ3 701 aa15.92■□□□□ 0.14
RETREG3-210ENST00000590541 H7C1Q1 480 aa15.92■□□□□ 0.14
RETREG3-210ENST00000590541 TAPBPO15533 448 aa15.92■□□□□ 0.14
RETREG3-210ENST00000590541 ERI3O43414 337 aaKnown RBP15.92■□□□□ 0.14
RETREG3-210ENST00000590541 LTA4HP09960 611 aaKnown RBP15.92■□□□□ 0.14
RETREG3-210ENST00000590541 SLC35E2BP0CK96 405 aa15.92■□□□□ 0.14
RETREG3-210ENST00000590541 TRPC1P48995 793 aa15.92■□□□□ 0.14
RETREG3-210ENST00000590541 SORDQ00796 357 aa15.92■□□□□ 0.14
RETREG3-210ENST00000590541 SLBPQ14493 270 aaKnown RBP eCLIP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms