RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 CPNE1Q99829 537 aa10.59□□□□□ -0.71
RAB5C-203ENST00000546881 SORBS1Q9BX66 1292 aaKnown RBP10.59□□□□□ -0.71
RAB5C-203ENST00000546881 MS4A8Q9BY19 250 aa10.59□□□□□ -0.71
RAB5C-203ENST00000546881 POLDIP3Q9BY77 421 aaKnown RBP10.59□□□□□ -0.71
RAB5C-203ENST00000546881 CDC42EP4Q9H3Q1 356 aaKnown RBP10.59□□□□□ -0.71
RAB5C-203ENST00000546881 SMYD2Q9NRG4 433 aa10.59□□□□□ -0.71
RAB5C-203ENST00000546881 CCM2LQ9NUG4 571 aaPredicted RBP10.59□□□□□ -0.71
RAB5C-203ENST00000546881 NINJ2Q9NZG7 142 aa10.59□□□□□ -0.71
RAB5C-203ENST00000546881 SPRR3Q9UBC9 169 aa10.59□□□□□ -0.71
RAB5C-203ENST00000546881 L3MBTL1Q9Y468 752 aa10.59□□□□□ -0.71
RAB5C-203ENST00000546881 EML6Q6ZMW3 1958 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 CXorf49A8MYA2 514 aaPredicted RBP10.58□□□□□ -0.72
RAB5C-203ENST00000546881 HRKO00198 91 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 SUSD5O60279 629 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 CD1DP15813 335 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 STMN1P16949 149 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 HIST1H1TP22492 207 aaPredicted RBP10.58□□□□□ -0.72
RAB5C-203ENST00000546881 GGT5P36269 586 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 GP5P40197 560 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 KIR2DL3P43628 341 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 STT3AP46977 705 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 TRPC1P48995 793 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 RAP1GDS1P52306 607 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 ATP6V0D1P61421 351 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 FOLH1Q04609 750 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 ILF2Q12905 390 aaKnown RBP10.58□□□□□ -0.72
RAB5C-203ENST00000546881 CBLBQ13191 982 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 NAB1Q13506 487 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 SLC25A35Q3KQZ1 300 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 PIGGQ5H8A4 983 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 SLC22A10Q63ZE4 541 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 MED27Q6P2C8 311 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 CHSY3Q70JA7 882 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 MYLK4Q86YV6 388 aaPredicted RBP10.58□□□□□ -0.72
RAB5C-203ENST00000546881 C9orf40Q8IXQ3 194 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 GSPT2Q8IYD1 628 aaKnown RBP10.58□□□□□ -0.72
RAB5C-203ENST00000546881 LIX1Q8N485 282 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 RNF175Q8N4F7 328 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 ZNF473Q8WTR7 871 aaKnown RBP10.58□□□□□ -0.72
RAB5C-203ENST00000546881 UBE2E3Q969T4 207 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 WDR34Q96EX3 536 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 RBM18Q96H35 190 aaKnown RBP10.58□□□□□ -0.72
RAB5C-203ENST00000546881 SENP5Q96HI0 755 aaPredicted RBP10.58□□□□□ -0.72
RAB5C-203ENST00000546881 GPATCH1Q9BRR8 931 aaKnown RBP10.58□□□□□ -0.72
RAB5C-203ENST00000546881 CD244Q9BZW8 370 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 SLC6A15Q9H2J7 730 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 OR51B5Q9H339 312 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 BOKQ9UMX3 212 aaPredicted RBP10.58□□□□□ -0.72
RAB5C-203ENST00000546881 IKBKGQ9Y6K9 419 aa10.58□□□□□ -0.72
RAB5C-203ENST00000546881 FAM159BA6NKW6 160 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 SUPT3HB4E1H0 165 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 FAM47E-STBD1D6RA91 191 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 CTIFO43310 598 aaKnown RBP10.57□□□□□ -0.72
RAB5C-203ENST00000546881 OR10H2O60403 315 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 HCN1O60741 890 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 SUPT3HO75486 399 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 PRKRAO75569 313 aaKnown RBP10.57□□□□□ -0.72
RAB5C-203ENST00000546881 WISP3O95389 354 aaPredicted RBP10.57□□□□□ -0.72
RAB5C-203ENST00000546881 RFPL3SP0C7P2 107 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 GABRA1P14867 456 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 EPORP19235 508 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 ENDOUP21128 410 aaKnown RBP10.57□□□□□ -0.72
RAB5C-203ENST00000546881 SPRP35270 261 aaPredicted RBP10.57□□□□□ -0.72
RAB5C-203ENST00000546881 GMPRP36959 345 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 HERVK_113P63132 956 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 ERVK-8P63133 956 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 PPP2R2AP63151 447 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 PLIN5Q00G26 463 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 SLAMF1Q13291 335 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 CEBPEQ15744 281 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 MPEG1Q2M385 716 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 HYAL4Q2M3T9 481 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 ZNF791Q3KP31 576 aaPredicted RBP10.57□□□□□ -0.72
RAB5C-203ENST00000546881 TMEM35AQ53FP2 167 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 CDKL4Q5MAI5 379 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 GRTP1Q5TC63 336 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 KHDRBS2Q5VWX1 349 aaKnown RBP10.57□□□□□ -0.72
RAB5C-203ENST00000546881 OR4C11Q6IEV9 310 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 DGAT2L6Q6ZPD8 337 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 RAPH1Q70E73 1250 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 SLC29A4Q7RTT9 530 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 LRRC70Q7Z2Q7 622 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 PDPRQ8NCN5 879 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 CHDHQ8NE62 594 aaPredicted RBP10.57□□□□□ -0.72
RAB5C-203ENST00000546881 UHMK1Q8TAS1 419 aaKnown RBP10.57□□□□□ -0.72
RAB5C-203ENST00000546881 NUBPLQ8TB37 319 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 SPACA9Q96E40 222 aaPredicted RBP10.57□□□□□ -0.72
RAB5C-203ENST00000546881 CMTM7Q96FZ5 175 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 ART5Q96L15 291 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 RBBP8Q99708 897 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 MCMBPQ9BTE3 642 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 ERVK-6Q9BXR3 956 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 CLEC4MQ9H2X3 399 aaPredicted RBP10.57□□□□□ -0.72
RAB5C-203ENST00000546881 LIME1Q9H400 295 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 ALG9Q9H6U8 611 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 RPF2Q9H7B2 306 aaKnown RBP10.57□□□□□ -0.72
RAB5C-203ENST00000546881 ZNF703Q9H7S9 590 aaPredicted RBP10.57□□□□□ -0.72
RAB5C-203ENST00000546881 ZFP64Q9NPA5 681 aa10.57□□□□□ -0.72
RAB5C-203ENST00000546881 PTBP2Q9UKA9 531 aaKnown RBP10.57□□□□□ -0.72
RAB5C-203ENST00000546881 ERVK-19Q9WJR5 959 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms