RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 FAM240BA0A1B0GVZ2 78 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 MFSD11O43934 449 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 GADD45GO95257 159 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 RAB40ALP0C0E4 278 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 ZNF20P17024 532 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 TUBG1P23258 451 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 PTGIRP43119 386 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 ARF3P61204 181 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 ARF1P84077 181 aaKnown RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 MERTKQ12866 999 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 TRIM32Q13049 653 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 NAE1Q13564 534 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 E2F2Q14209 437 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 FIGLAQ6QHK4 219 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 TMEM64Q6YI46 380 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 MAMDC2Q7Z304 686 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 MFSD6LQ8IWD5 586 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 FITM2Q8N6M3 262 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 LNX1Q8TBB1 728 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 SH3RF2Q8TEC5 729 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 RAB40AQ8WXH6 277 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 GIMAP5Q96F15 307 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 CMTM3Q96MX0 182 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 CGREF1Q99674 301 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 TUBG2Q9NRH3 451 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 POLR3BQ9NW08 1133 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 RBPJLQ9UBG7 517 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 MOKQ9UQ07 419 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 DRGXA6NNA5 263 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 NT5C1B-RDH14C9J2C7 533 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 SSNA1O43805 119 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 ZNF780AO75290 641 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 BPNT1O95861 308 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 ATP6V1B1P15313 513 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 FUT4P22083 530 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 HNRNPA2B1P22626 353 aaKnown RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 RBMS1P29558 406 aaKnown RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 MAP3K8P41279 467 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 RPS23P62266 143 aaKnown RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 HMGCS1Q01581 520 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 MED22Q15528 200 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 FAM174BQ3ZCQ3 159 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 IDNKQ5T6J7 187 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 VWA5B1Q5TIE3 1220 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 TMEM53Q6P2H8 277 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 LINGO4Q6UY18 593 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 FBXL6Q8N531 539 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 SLC5A8Q8N695 610 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 TFGQ92734 400 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 GPER1Q99527 375 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 STRA6Q9BX79 667 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 CADM1Q9BY67 442 aaKnown RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 SPACA1Q9HBV2 294 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 MCCC2Q9HCC0 563 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 ENY2Q9NPA8 101 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 IMP3Q9NV31 184 aaKnown RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 B3GNT3Q9Y2A9 372 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 GXYLT2A0PJZ3 443 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 ANKRD63C9JTQ0 380 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 HOXC11O43248 304 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 FMO6PO60774 539 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 CHRNB4P30926 498 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 GLRBP48167 497 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 HNRNPA1L2Q32P51 320 aaKnown RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 RSBN1Q5VWQ0 802 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 RHBDF2Q6PJF5 856 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 ZNF773Q6PK81 442 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 ASPGQ86U10 573 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 ZNF614Q8N883 585 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 SIMC1Q8NDZ2 872 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 HSPBAP1Q96EW2 488 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 ORAI3Q9BRQ5 295 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 SLC12A9Q9BXP2 914 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 MROQ9BYG7 248 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 REXO4Q9GZR2 422 aaKnown RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 PTPRHQ9HD43 1115 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 VAPAQ9P0L0 249 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 TNFRSF10DQ9UBN6 386 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 KIF25Q9UIL4 384 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 CD207Q9UJ71 328 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 LHX6Q9UPM6 363 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 USP3Q9Y6I4 520 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 ACOD1A6NK06 481 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 GMFGO60234 142 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 GALR3O60755 368 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 RASAL1O95294 804 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 CPOXP36551 454 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 IDH2P48735 452 aaKnown RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 DNASE1L1P49184 302 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 KLK7P49862 253 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 PPP5CP53041 499 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 MCCD1P59942 119 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-209ENST00000511467 PLPP4Q5VZY2 271 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 C16orf46Q6P387 395 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 PGAP1Q75T13 922 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 PDZD3Q86UT5 571 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 IRF2BP1Q8IU81 584 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 OR4K17Q8NGC6 315 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 STOML3Q8TAV4 291 aa4.73□□□□□ -1.65
PTPN13-209ENST00000511467 GTPBP3Q969Y2 492 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms