RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 PIK3CBP42338 1070 aa21.01■□□□□ 0.95
USP42-205ENST00000465073 RAP1GDS1P52306 607 aa21.01■□□□□ 0.95
USP42-205ENST00000465073 GPX6P59796 221 aa21.01■□□□□ 0.95
USP42-205ENST00000465073 MYBPHQ13203 477 aa21.01■□□□□ 0.95
USP42-205ENST00000465073 GRHL2Q6ISB3 625 aa21.01■□□□□ 0.95
USP42-205ENST00000465073 TBC1D1Q86TI0 1168 aaPredicted RBP21.01■□□□□ 0.95
USP42-205ENST00000465073 TMEM200AQ86VY9 491 aa21.01■□□□□ 0.95
USP42-205ENST00000465073 PAQR8Q8TEZ7 354 aa21.01■□□□□ 0.95
USP42-205ENST00000465073 SPACA9Q96E40 222 aaPredicted RBP21.01■□□□□ 0.95
USP42-205ENST00000465073 ATOH8Q96SQ7 321 aa21.01■□□□□ 0.95
USP42-205ENST00000465073 SORBS1Q9BX66 1292 aaKnown RBP21.01■□□□□ 0.95
USP42-205ENST00000465073 EXO5Q9H790 373 aa21.01■□□□□ 0.95
USP42-205ENST00000465073 Q9UFV3 132 aa21.01■□□□□ 0.95
USP42-205ENST00000465073 UBXN8O00124 270 aa21■□□□□ 0.95
USP42-205ENST00000465073 NADKO95544 446 aaPredicted RBP21■□□□□ 0.95
USP42-205ENST00000465073 LTA4HP09960 611 aaKnown RBP21■□□□□ 0.95
USP42-205ENST00000465073 GABRA1P14867 456 aa21■□□□□ 0.95
USP42-205ENST00000465073 ALOX15P16050 662 aaPredicted RBP21■□□□□ 0.95
USP42-205ENST00000465073 GMPRP36959 345 aa21■□□□□ 0.95
USP42-205ENST00000465073 ARFIP1P53367 373 aa21■□□□□ 0.95
USP42-205ENST00000465073 FOLH1Q04609 750 aa21■□□□□ 0.95
USP42-205ENST00000465073 DLG1Q12959 904 aa21■□□□□ 0.95
USP42-205ENST00000465073 C1orf185Q5T7R7 199 aa21■□□□□ 0.95
USP42-205ENST00000465073 ADGRD1Q6QNK2 874 aa21■□□□□ 0.95
USP42-205ENST00000465073 ZCCHC7Q8N3Z6 543 aaKnown RBP21■□□□□ 0.95
USP42-205ENST00000465073 PPM1NQ8N819 430 aa21■□□□□ 0.95
USP42-205ENST00000465073 HUS1BQ8NHY5 278 aa21■□□□□ 0.95
USP42-205ENST00000465073 CNIH4Q9P003 139 aa21■□□□□ 0.95
USP42-205ENST00000465073 BOKQ9UMX3 212 aaPredicted RBP21■□□□□ 0.95
USP42-205ENST00000465073 TSC22D4Q9Y3Q8 395 aa21■□□□□ 0.95
USP42-205ENST00000465073 KCNJ2P63252 427 aa20.99■□□□□ 0.95
USP42-205ENST00000465073 TNFRSF17Q02223 184 aa20.99■□□□□ 0.95
USP42-205ENST00000465073 DDX39BQ13838 428 aaKnown RBP20.99■□□□□ 0.95
USP42-205ENST00000465073 SLMAPQ14BN4 828 aa20.99■□□□□ 0.95
USP42-205ENST00000465073 SLC25A35Q3KQZ1 300 aa20.99■□□□□ 0.95
USP42-205ENST00000465073 KBTBD12Q3ZCT8 623 aa20.99■□□□□ 0.95
USP42-205ENST00000465073 LYPD8Q6UX82 237 aa20.99■□□□□ 0.95
USP42-205ENST00000465073 DGAT2L6Q6ZPD8 337 aa20.99■□□□□ 0.95
USP42-205ENST00000465073 CMC1Q7Z7K0 106 aa20.99■□□□□ 0.95
USP42-205ENST00000465073 ST13P4Q8IZP2 240 aaPredicted RBP20.99■□□□□ 0.95
USP42-205ENST00000465073 PELOQ9BRX2 385 aaKnown RBP20.99■□□□□ 0.95
USP42-205ENST00000465073 GRPEL1Q9HAV7 217 aa20.99■□□□□ 0.95
USP42-205ENST00000465073 ZFP64Q9NPA5 681 aa20.99■□□□□ 0.95
USP42-205ENST00000465073 IGSF5Q9NSI5 407 aa20.99■□□□□ 0.95
USP42-205ENST00000465073 GRHL1Q9NZI5 618 aa20.99■□□□□ 0.95
USP42-205ENST00000465073 PCDHGA11Q9Y5H2 935 aa20.99■□□□□ 0.95
USP42-205ENST00000465073 IQANK1A0A1B0GTG1 560 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 HRKO00198 91 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 PLPP1O14494 284 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 PROM1O43490 865 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 FAM155BO75949 473 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 ZWINTO95229 277 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 PTX3P26022 381 aaPredicted RBP20.98■□□□□ 0.95
USP42-205ENST00000465073 SERPINB3P29508 390 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 ADH7P40394 386 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 BUD31P41223 144 aaPredicted RBP20.98■□□□□ 0.95
USP42-205ENST00000465073 C18orf63Q68DL7 685 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 SLC29A4Q7RTT9 530 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 FBXW8Q8N3Y1 598 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 TEX9Q8N6V9 391 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 CNPPD1Q9BV87 410 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 ZNF703Q9H7S9 590 aaPredicted RBP20.98■□□□□ 0.95
USP42-205ENST00000465073 DMRT3Q9NQL9 472 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 QPCTLQ9NXS2 382 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 ALKBH4Q9NXW9 302 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 ANGPTL3Q9Y5C1 460 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 PCDHGB3Q9Y5G1 929 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 EML6Q6ZMW3 1958 aa20.98■□□□□ 0.95
USP42-205ENST00000465073 SYCE1LA8MT33 242 aa20.97■□□□□ 0.95
USP42-205ENST00000465073 GPR75O95800 540 aa20.97■□□□□ 0.95
USP42-205ENST00000465073 FBXO45P0C2W1 286 aa20.97■□□□□ 0.95
USP42-205ENST00000465073 ENDOUP21128 410 aaKnown RBP20.97■□□□□ 0.95
USP42-205ENST00000465073 HNRNPH2P55795 449 aaKnown RBP20.97■□□□□ 0.95
USP42-205ENST00000465073 SPRED3Q2MJR0 410 aa20.97■□□□□ 0.95
USP42-205ENST00000465073 RIPPLY2Q5TAB7 128 aa20.97■□□□□ 0.95
USP42-205ENST00000465073 LIPJQ5W064 366 aa20.97■□□□□ 0.95
USP42-205ENST00000465073 MYLK4Q86YV6 388 aaPredicted RBP20.97■□□□□ 0.95
USP42-205ENST00000465073 LIX1LQ8IVB5 337 aa20.97■□□□□ 0.95
USP42-205ENST00000465073 LRRC25Q8N386 305 aaPredicted RBP20.97■□□□□ 0.95
USP42-205ENST00000465073 RNF175Q8N4F7 328 aa20.97■□□□□ 0.95
USP42-205ENST00000465073 FAM13CQ8NE31 585 aa20.97■□□□□ 0.95
USP42-205ENST00000465073 MTERF1Q99551 399 aaKnown RBP20.97■□□□□ 0.95
USP42-205ENST00000465073 ACKR4Q9NPB9 350 aa20.97■□□□□ 0.95
USP42-205ENST00000465073 SPRR3Q9UBC9 169 aa20.97■□□□□ 0.95
USP42-205ENST00000465073 ACOT9Q9Y305 439 aa20.97■□□□□ 0.95
USP42-205ENST00000465073 CCDC189A1A4V9 331 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 RAD51CO43502 376 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 OR10H2O60403 315 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 RFPL3SP0C7P2 107 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 MTHFD2P13995 350 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 STX2P32856 288 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 ART1P52961 327 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 DLX5P56178 289 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 PHEXP78562 749 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 ZNF267Q14586 743 aaPredicted RBP20.96■□□□□ 0.95
USP42-205ENST00000465073 PRAMEF20Q5VT98 475 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 CCDC91Q7Z6B0 441 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 SPATA4Q8NEY3 305 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 RHEBL1Q8TAI7 183 aa20.96■□□□□ 0.95
USP42-205ENST00000465073 RIT1Q92963 219 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms